RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 HMX2A2RU54 273 aa16.32■□□□□ 0.2
SYNCRIP-202ENST00000369622 TXNP10599 105 aaKnown RBP16.32■□□□□ 0.2
SYNCRIP-202ENST00000369622 ADORA2BP29275 332 aa16.32■□□□□ 0.2
SYNCRIP-202ENST00000369622 CDKL1Q00532 357 aa16.32■□□□□ 0.2
SYNCRIP-202ENST00000369622 CLPPQ16740 277 aaPredicted RBP16.32■□□□□ 0.2
SYNCRIP-202ENST00000369622 ZNF423Q2M1K9 1284 aa16.32■□□□□ 0.2
SYNCRIP-202ENST00000369622 PPM1JQ5JR12 505 aa16.32■□□□□ 0.2
SYNCRIP-202ENST00000369622 GLRA4Q5JXX5 417 aa16.32■□□□□ 0.2
SYNCRIP-202ENST00000369622 PYROXD2Q8N2H3 581 aa16.32■□□□□ 0.2
SYNCRIP-202ENST00000369622 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.32■□□□□ 0.2
SYNCRIP-202ENST00000369622 DDHD1Q8NEL9 900 aa16.32■□□□□ 0.2
SYNCRIP-202ENST00000369622 TRPM4Q8TD43 1214 aa16.32■□□□□ 0.2
SYNCRIP-202ENST00000369622 PPP1R13LQ8WUF5 828 aa16.32■□□□□ 0.2
SYNCRIP-202ENST00000369622 ZFRQ96KR1 1074 aaKnown RBP16.32■□□□□ 0.2
SYNCRIP-202ENST00000369622 PPP1R36Q96LQ0 422 aa16.32■□□□□ 0.2
SYNCRIP-202ENST00000369622 LGMNQ99538 433 aa16.32■□□□□ 0.2
SYNCRIP-202ENST00000369622 NRDE2Q9H7Z3 1164 aa16.32■□□□□ 0.2
SYNCRIP-202ENST00000369622 TXNDC16Q9P2K2 825 aa16.32■□□□□ 0.2
SYNCRIP-202ENST00000369622 GIT1Q9Y2X7 761 aa16.32■□□□□ 0.2
SYNCRIP-202ENST00000369622 TRDMT1O14717 391 aaKnown RBP16.31■□□□□ 0.2
SYNCRIP-202ENST00000369622 ZBTB7AO95365 584 aa16.31■□□□□ 0.2
SYNCRIP-202ENST00000369622 TNFAIP8O95379 198 aa16.31■□□□□ 0.2
SYNCRIP-202ENST00000369622 PROZP22891 400 aa16.31■□□□□ 0.2
SYNCRIP-202ENST00000369622 NEK2P51955 445 aa16.31■□□□□ 0.2
SYNCRIP-202ENST00000369622 GTF2A2P52657 109 aa16.31■□□□□ 0.2
SYNCRIP-202ENST00000369622 PDK2Q15119 407 aa16.31■□□□□ 0.2
SYNCRIP-202ENST00000369622 SF3B4Q15427 424 aaKnown RBP eCLIP16.31■□□□□ 0.22e-7■□□□□ 10.4
SYNCRIP-202ENST00000369622 ERI1Q8IV48 349 aaKnown RBP16.31■□□□□ 0.2
SYNCRIP-202ENST00000369622 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.31■□□□□ 0.22e-7■■■■□ 24
SYNCRIP-202ENST00000369622 NLRP7Q8WX94 980 aa16.31■□□□□ 0.2
SYNCRIP-202ENST00000369622 SIGLEC10Q96LC7 697 aa16.31■□□□□ 0.2
SYNCRIP-202ENST00000369622 GPAMQ9HCL2 828 aa16.31■□□□□ 0.2
SYNCRIP-202ENST00000369622 ACSS2Q9NR19 701 aa16.31■□□□□ 0.2
SYNCRIP-202ENST00000369622 MRGBPQ9NV56 204 aa16.31■□□□□ 0.2
SYNCRIP-202ENST00000369622 APOBEC2Q9Y235 224 aaKnown RBP16.31■□□□□ 0.2
SYNCRIP-202ENST00000369622 TNFSF13BQ9Y275 285 aa16.31■□□□□ 0.2
SYNCRIP-202ENST00000369622 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.31■□□□□ 0.2
SYNCRIP-202ENST00000369622 CAPN14A8MX76 684 aa16.31■□□□□ 0.2
SYNCRIP-202ENST00000369622 ENDOD1O94919 500 aa16.31■□□□□ 0.2
SYNCRIP-202ENST00000369622 C1QAP02745 245 aa16.31■□□□□ 0.2
SYNCRIP-202ENST00000369622 PRKCHP24723 683 aa16.31■□□□□ 0.2
SYNCRIP-202ENST00000369622 ABCG1P45844 678 aa16.31■□□□□ 0.2
SYNCRIP-202ENST00000369622 GABRB2P47870 512 aa16.31■□□□□ 0.2
SYNCRIP-202ENST00000369622 LBX2Q6XYB7 198 aa16.31■□□□□ 0.2
SYNCRIP-202ENST00000369622 GFM2Q969S9 779 aaKnown RBP16.31■□□□□ 0.2
SYNCRIP-202ENST00000369622 MRPL45Q9BRJ2 306 aaKnown RBP16.31■□□□□ 0.2
SYNCRIP-202ENST00000369622 SIRPGQ9P1W8 387 aa16.31■□□□□ 0.2
SYNCRIP-202ENST00000369622 GNEQ9Y223 722 aaKnown RBP16.31■□□□□ 0.2
SYNCRIP-202ENST00000369622 NFKBIEO00221 500 aa16.3■□□□□ 0.2
SYNCRIP-202ENST00000369622 TPP1O14773 563 aa16.3■□□□□ 0.2
SYNCRIP-202ENST00000369622 KLF11O14901 512 aa16.3■□□□□ 0.2
SYNCRIP-202ENST00000369622 DGKIO75912 1065 aa16.3■□□□□ 0.2
SYNCRIP-202ENST00000369622 FAM58BPP0C7Q3 252 aa16.3■□□□□ 0.2
SYNCRIP-202ENST00000369622 C21orf59P57076 290 aa16.3■□□□□ 0.2
SYNCRIP-202ENST00000369622 PPP2R5DQ14738 602 aa16.3■□□□□ 0.2
SYNCRIP-202ENST00000369622 BCL2A1Q16548 175 aa16.3■□□□□ 0.2
SYNCRIP-202ENST00000369622 NRF1Q16656 503 aa16.3■□□□□ 0.2
SYNCRIP-202ENST00000369622 DNAL1Q4LDG9 190 aa16.3■□□□□ 0.2
SYNCRIP-202ENST00000369622 NANOGP8Q6NSW7 305 aa16.3■□□□□ 0.2
SYNCRIP-202ENST00000369622 ILDR2Q71H61 639 aa16.3■□□□□ 0.2
SYNCRIP-202ENST00000369622 CROCCP3Q8IVE0 287 aa16.3■□□□□ 0.2
SYNCRIP-202ENST00000369622 IQCF2Q8IXL9 164 aa16.3■□□□□ 0.2
SYNCRIP-202ENST00000369622 FAM149B1Q96BN6 582 aa16.3■□□□□ 0.2
SYNCRIP-202ENST00000369622 THAP11Q96EK4 314 aa16.3■□□□□ 0.2
SYNCRIP-202ENST00000369622 MAELQ96JY0 434 aaKnown RBP16.3■□□□□ 0.2
SYNCRIP-202ENST00000369622 CXCL16Q9H2A7 254 aa16.3■□□□□ 0.2
SYNCRIP-202ENST00000369622 PNPOQ9NVS9 261 aa16.3■□□□□ 0.2
SYNCRIP-202ENST00000369622 ZNF358Q9NW07 568 aa16.3■□□□□ 0.2
SYNCRIP-202ENST00000369622 ZNF112Q9UJU3 913 aa16.3■□□□□ 0.2
SYNCRIP-202ENST00000369622 KDM1AO60341 852 aa16.3■□□□□ 0.2
SYNCRIP-202ENST00000369622 TGFB3P10600 412 aa16.3■□□□□ 0.2
SYNCRIP-202ENST00000369622 INSRRP14616 1297 aa16.3■□□□□ 0.2
SYNCRIP-202ENST00000369622 ARF4P18085 180 aaPredicted RBP16.3■□□□□ 0.2
SYNCRIP-202ENST00000369622 TGM2P21980 687 aa16.3■□□□□ 0.2
SYNCRIP-202ENST00000369622 NR1H2P55055 460 aa16.3■□□□□ 0.2
SYNCRIP-202ENST00000369622 TTC30AQ86WT1 665 aa16.3■□□□□ 0.2
SYNCRIP-202ENST00000369622 FAM131BQ86XD5 332 aa16.3■□□□□ 0.2
SYNCRIP-202ENST00000369622 RNF148Q8N7C7 305 aa16.3■□□□□ 0.2
SYNCRIP-202ENST00000369622 NDRG1Q92597 394 aaKnown RBP16.3■□□□□ 0.2
SYNCRIP-202ENST00000369622 MAN1C1Q9NR34 630 aa16.3■□□□□ 0.2
SYNCRIP-202ENST00000369622 THAP1Q9NVV9 213 aa16.3■□□□□ 0.2
SYNCRIP-202ENST00000369622 PPEF2O14830 753 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 PFKMP08237 780 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 CYP2C9P11712 490 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 MYCLP1P12525 358 aaPredicted RBP16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 SLC1A6P48664 564 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 PCYT1AP49585 367 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 OLIG2Q13516 323 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 INAQ16352 499 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 CARTPTQ16568 116 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 CELF3Q5SZQ8 465 aaKnown RBP16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 CDKL3Q8IVW4 592 aaPredicted RBP16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 COPS7BQ9H9Q2 264 aaPredicted RBP16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 PNPLA8Q9NP80 782 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 PSAT1Q9Y617 370 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 PAPSS1O43252 624 aaPredicted RBP16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 MGAT1P26572 445 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 CRHR1P34998 444 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 RBP5P82980 135 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 SLC6A3Q01959 620 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms