RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 SASH3O75995 380 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 ALDH1A2O94788 518 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 APODP05090 189 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 RALAP11233 206 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 ADH5P11766 374 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 HOXB3P14651 431 aaPredicted RBP10.29□□□□□ -0.76
TPM3-210ENST00000368530 ENGP17813 658 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 GPD1P21695 349 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 ITPKAP23677 461 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 YWHAQP27348 245 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 CARSP49589 748 aaKnown RBP10.29□□□□□ -0.76
TPM3-210ENST00000368530 SEMA3BQ13214 749 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 SNX1Q13596 522 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 SIX1Q15475 284 aaPredicted RBP10.29□□□□□ -0.76
TPM3-210ENST00000368530 CDO1Q16878 200 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 SMTNL2Q2TAL5 461 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 MAP9Q49MG5 647 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 ODF2Q5BJF6 829 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 EOGTQ5NDL2 527 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 KAZNQ674X7 775 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 TRNP1Q6NT89 227 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 TTC27Q6P3X3 843 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 ARMCX6Q7L4S7 300 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 LPCAT2Q7L5N7 544 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 ANKS1BQ7Z6G8 1248 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 DDX42Q86XP3 938 aaKnown RBP eCLIP10.29□□□□□ -0.76
TPM3-210ENST00000368530 TMEM25Q86YD3 366 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 MIB1Q86YT6 1006 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 IFT20Q8IY31 132 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 FUKQ8N0W3 1084 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 NUP93Q8N1F7 819 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 NIPA2Q8N8Q9 360 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 SCAMP5Q8TAC9 235 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 CLEC4CQ8WTT0 213 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 RXFP2Q8WXD0 754 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 SLITRK1Q96PX8 696 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 HNRNPABQ99729 332 aaKnown RBP10.29□□□□□ -0.76
TPM3-210ENST00000368530 TRIM31Q9BZY9 425 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 GDF3Q9NR23 364 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 ARHGEF4Q9NR80 690 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 TBC1D14Q9P2M4 693 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 PCSK1NQ9UHG2 260 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 LCMT1Q9UIC8 334 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 ASCC3Q8N3C0 2202 aaKnown RBP10.29□□□□□ -0.76
TPM3-210ENST00000368530 TNRC6BQ9UPQ9 1833 aaKnown RBP10.29□□□□□ -0.76
TPM3-210ENST00000368530 A0A1W2PQF6 199 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 LRRD1A4D1F6 860 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 HOXC11O43248 304 aaPredicted RBP10.28□□□□□ -0.76
TPM3-210ENST00000368530 TULP3O75386 442 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 LRCH4O75427 683 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 BEST1O76090 585 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 ADH1CP00326 375 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 CAPNS1P04632 268 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 MBL2P11226 248 aaPredicted RBP10.28□□□□□ -0.76
TPM3-210ENST00000368530 KRT10P13645 584 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 PDGFRAP16234 1089 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 GABRG2P18507 467 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 FLT3P36888 993 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 KCNJ1P48048 391 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 MAP3K7CLP57077 242 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 ATP11AP98196 1134 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 DR1Q01658 176 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 SLC6A3Q01959 620 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 KDSRQ06136 332 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 LMAN2Q12907 356 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 C15orf59Q2T9L4 293 aaPredicted RBP10.28□□□□□ -0.76
TPM3-210ENST00000368530 UAP1L1Q3KQV9 507 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 RAB6CQ53S08 254 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 KCNT1Q5JUK3 1230 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 OLFML1Q6UWY5 402 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 MFSD7Q6UXD7 560 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 SND1Q7KZF4 910 aaKnown RBP eCLIP10.28□□□□□ -0.76
TPM3-210ENST00000368530 MAATS1Q7Z4T9 603 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 TMEM110Q86TL2 294 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 BBS7Q8IWZ6 715 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 ARFGAP1Q8N6T3 406 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 NAT16Q8N8M0 369 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 ZMIZ2Q8NF64 920 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 EXD1Q8NHP7 514 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 HMGB4Q8WW32 186 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 ATG4AQ8WYN0 398 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 OVCA2Q8WZ82 227 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 RAPGEF5Q92565 580 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 OTUB2Q96DC9 234 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 FAM118BQ9BPY3 351 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 OSBPL8Q9BZF1 889 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 RAB6CQ9H0N0 254 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 DPH5Q9H2P9 285 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 CCSER2Q9H7U1 834 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 CAPN10Q9HC96 672 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 POLMQ9NP87 494 aaPredicted RBP10.28□□□□□ -0.76
TPM3-210ENST00000368530 FSCN3Q9NQT6 498 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 KRT82Q9NSB4 513 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 NFU1Q9UMS0 254 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 R3HDM2Q9Y2K5 976 aaKnown RBP10.28□□□□□ -0.76
TPM3-210ENST00000368530 STARD13Q9Y3M8 1113 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 PKD1L2Q7Z442 2459 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 TCRBV21S2A2A0A5A6 115 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 FAM221BA6H8Z2 402 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 C2CD4BA6NLJ0 364 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms