RNA–Protein interactions for RNA: ENST00000367694.2

RC3H1-202, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene RC3H1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-202ENST00000367694 USP17L21D6R901 530 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 USP17L18D6R9N7 530 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 USP17L22D6RA61 530 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 USP17L19D6RCP7 530 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 USP17L20D6RJB6 530 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 F8W8V4 182 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 ULK1O75385 1050 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 IFIT1P09914 478 aaKnown RBP5.04□□□□□ -1.6
RC3H1-202ENST00000367694 SPDYE6P0CI01 402 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 HSMCR30P0CW71 290 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 DBTP11182 482 aaKnown RBP5.04□□□□□ -1.6
RC3H1-202ENST00000367694 KRT5P13647 590 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 ATP5C1P36542 298 aaKnown RBP5.04□□□□□ -1.6
RC3H1-202ENST00000367694 STAT1P42224 750 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 SLC15A1P46059 708 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 GDF10P55107 478 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 GRIN1Q05586 938 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 FMR1Q06787 632 aaKnown RBP eCLIP5.04□□□□□ -1.6
RC3H1-202ENST00000367694 USP17L24Q0WX57 530 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 HIC1Q14526 733 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 SNX17Q15036 470 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 TAF5Q15542 800 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 OCLNQ16625 522 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 SPDYE2Q495Y8 402 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 GNASQ5JWF2 1037 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 LIN9Q5TKA1 542 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 FOXR2Q6PJQ5 311 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 C16orf86Q6ZW13 317 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 TTC7BQ86TV6 843 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 ZC3H18Q86VM9 953 aaKnown RBP5.04□□□□□ -1.6
RC3H1-202ENST00000367694 TRIM22Q8IYM9 498 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 RNF113BQ8IZP6 322 aaKnown RBP5.04□□□□□ -1.6
RC3H1-202ENST00000367694 AHI1Q8N157 1196 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 MARCH10Q8NA82 808 aaPredicted RBP5.04□□□□□ -1.6
RC3H1-202ENST00000367694 URGCPQ8TCY9 931 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 KLHL6Q8WZ60 621 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 UFD1Q92890 307 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 FAM71F1Q96KD3 344 aaPredicted RBP5.04□□□□□ -1.6
RC3H1-202ENST00000367694 TEKT5Q96M29 485 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 QRFPRQ96P65 431 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 BTBD9Q96Q07 612 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 ZKSCAN3Q9BRR0 538 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 TMEM79Q9BSE2 394 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 DDX23Q9BUQ8 820 aaKnown RBP5.04□□□□□ -1.6
RC3H1-202ENST00000367694 TINAGL1Q9GZM7 467 aaPredicted RBP5.04□□□□□ -1.6
RC3H1-202ENST00000367694 ADAM7Q9H2U9 754 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 ETNK1Q9HBU6 452 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 PLSCR4Q9NRQ2 329 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 PLCXD1Q9NUJ7 323 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 RRN3Q9NYV6 651 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.04□□□□□ -1.6
RC3H1-202ENST00000367694 RBMX2Q9Y388 322 aaKnown RBP5.04□□□□□ -1.6
RC3H1-202ENST00000367694 CPQQ9Y646 472 aa5.04□□□□□ -1.6
RC3H1-202ENST00000367694 TULP4Q9NRJ4 1543 aa5.03□□□□□ -1.6
RC3H1-202ENST00000367694 TANC1Q9C0D5 1861 aa5.03□□□□□ -1.6
RC3H1-202ENST00000367694 MN1Q10571 1320 aaPredicted RBP5.03□□□□□ -1.6
RC3H1-202ENST00000367694 ZNF839A8K0R7 811 aa5.03□□□□□ -1.6
RC3H1-202ENST00000367694 A8MXE2 369 aa5.03□□□□□ -1.6
RC3H1-202ENST00000367694 KPNA4O00629 521 aaPredicted RBP5.03□□□□□ -1.6
RC3H1-202ENST00000367694 ABCD4O14678 606 aa5.03□□□□□ -1.6
RC3H1-202ENST00000367694 SURF6O75683 361 aaKnown RBP5.03□□□□□ -1.6
RC3H1-202ENST00000367694 GPX5O75715 221 aa5.03□□□□□ -1.6
RC3H1-202ENST00000367694 OR7A10O76100 309 aa5.03□□□□□ -1.6
RC3H1-202ENST00000367694 DDNO94850 711 aaPredicted RBP5.03□□□□□ -1.6
RC3H1-202ENST00000367694 IGHV2-70P01814 119 aa5.03□□□□□ -1.6
RC3H1-202ENST00000367694 QDPRP09417 244 aa5.03□□□□□ -1.6
RC3H1-202ENST00000367694 TXNP10599 105 aaKnown RBP5.03□□□□□ -1.6
RC3H1-202ENST00000367694 GIFP27352 417 aa5.03□□□□□ -1.6
RC3H1-202ENST00000367694 MMP13P45452 471 aa5.03□□□□□ -1.6
RC3H1-202ENST00000367694 DSG1Q02413 1049 aa5.03□□□□□ -1.6
RC3H1-202ENST00000367694 MGAT3Q09327 533 aa5.03□□□□□ -1.6
RC3H1-202ENST00000367694 SLC14A1Q13336 389 aa5.03□□□□□ -1.6
RC3H1-202ENST00000367694 KIAA0319Q5VV43 1072 aa5.03□□□□□ -1.6
RC3H1-202ENST00000367694 TMC5Q6UXY8 1006 aa5.03□□□□□ -1.6
RC3H1-202ENST00000367694 NOSTRINQ8IVI9 506 aa5.03□□□□□ -1.6
RC3H1-202ENST00000367694 TCEAL8Q8IYN2 117 aa5.03□□□□□ -1.6
RC3H1-202ENST00000367694 EID3Q8N140 333 aa5.03□□□□□ -1.6
RC3H1-202ENST00000367694 HUS1BQ8NHY5 278 aa5.03□□□□□ -1.6
RC3H1-202ENST00000367694 TRAF4Q9BUZ4 470 aaPredicted RBP5.03□□□□□ -1.6
RC3H1-202ENST00000367694 INTS13Q9NVM9 706 aa5.03□□□□□ -1.6
RC3H1-202ENST00000367694 EIF2B4Q9UI10 523 aaKnown RBP5.03□□□□□ -1.6
RC3H1-202ENST00000367694 PALD1Q9ULE6 856 aa5.03□□□□□ -1.6
RC3H1-202ENST00000367694 TNKSO95271 1327 aa5.03□□□□□ -1.6
RC3H1-202ENST00000367694 A8MXQ7 604 aa5.03□□□□□ -1.6
RC3H1-202ENST00000367694 H3BNX3 289 aa5.03□□□□□ -1.6
RC3H1-202ENST00000367694 TM9SF1O15321 606 aa5.03□□□□□ -1.6
RC3H1-202ENST00000367694 HS6ST1O60243 411 aa5.03□□□□□ -1.6
RC3H1-202ENST00000367694 DKC1O60832 514 aaKnown RBP eCLIP5.03□□□□□ -1.6
RC3H1-202ENST00000367694 NPR1P16066 1061 aa5.03□□□□□ -1.6
RC3H1-202ENST00000367694 LMOD1P29536 600 aaPredicted RBP5.03□□□□□ -1.6
RC3H1-202ENST00000367694 LEPRP48357 1165 aaKnown RBP5.03□□□□□ -1.6
RC3H1-202ENST00000367694 CCT4P50991 539 aaKnown RBP5.03□□□□□ -1.6
RC3H1-202ENST00000367694 NEK3P51956 506 aa5.03□□□□□ -1.6
RC3H1-202ENST00000367694 CHN2P52757 468 aa5.03□□□□□ -1.6
RC3H1-202ENST00000367694 MAPK12P53778 367 aa5.03□□□□□ -1.6
RC3H1-202ENST00000367694 TPTEP56180 551 aa5.03□□□□□ -1.6
RC3H1-202ENST00000367694 AP1S1P61966 158 aa5.03□□□□□ -1.6
RC3H1-202ENST00000367694 PTPRRQ15256 657 aa5.03□□□□□ -1.6
RC3H1-202ENST00000367694 PSMD5Q16401 504 aa5.03□□□□□ -1.6
RC3H1-202ENST00000367694 C21orf62-AS1Q17RA5 79 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms