RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 FBXO21O94952 628 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 F11P03951 625 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 SERPINF2P08697 491 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 FTH1P19P0C7X4 201 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 PLA2G2AP14555 144 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 PDGFRAP16234 1089 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 HMGA1P17096 107 aaKnown RBP11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 ITPKAP23677 461 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 FLT3P36888 993 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 PTPN9P43378 593 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 SEC13P55735 322 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 TSPY1Q01534 308 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 DHX34Q14147 1143 aaKnown RBP11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 CRY1Q16526 586 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 DUOXA1Q1HG43 343 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 CCDC14Q49A88 953 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 MAP9Q49MG5 647 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 C2orf27AQ580R0 203 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 RAB41Q5JT25 222 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 EFHC1Q5JVL4 640 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 TXNDC8Q6A555 127 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 TRNP1Q6NT89 227 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 TMCO3Q6UWJ1 677 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 IFT20Q8IY31 132 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 ARFGAP1Q8N6T3 406 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 PNPLA1Q8N8W4 532 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 PRELID2Q8N945 189 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 EIF1ADQ8N9N8 165 aaKnown RBP11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 OR2I1PQ8NGU4 316 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 GIPC2Q8TF65 315 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 ATP2A3Q93084 1043 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 MYLPFQ96A32 169 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 CRELD1Q96HD1 420 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 PIWIL1Q96J94 861 aaKnown RBP11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 CAMK1GQ96NX5 476 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 SLC22A12Q96S37 553 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 SEPT5Q99719 369 aaPredicted RBP11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 OSBPL8Q9BZF1 889 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 DDX47Q9H0S4 455 aaKnown RBP11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 LRRC4Q9HBW1 653 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 ARFGAP3Q9NP61 516 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 PNPLA8Q9NP80 782 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 GDF3Q9NR23 364 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 KRT82Q9NSB4 513 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 HOMER3Q9NSC5 361 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 DKK4Q9UBT3 224 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 PCYOX1Q9UHG3 505 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 SLC6A14Q9UN76 642 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 EFR3BQ9Y2G0 817 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 PCDHB9Q9Y5E1 797 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 PIEZO2Q9H5I5 2752 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 PTPN13Q12923 2485 aa11.61□□□□□ -0.55
CSNK1E-202ENST00000366216 HSF2BPO75031 334 aa11.61□□□□□ -0.55
CSNK1E-202ENST00000366216 BEST1O76090 585 aa11.61□□□□□ -0.55
CSNK1E-202ENST00000366216 ALDH1A2O94788 518 aa11.61□□□□□ -0.55
CSNK1E-202ENST00000366216 HEXIM1O94992 359 aaKnown RBP11.61□□□□□ -0.55
CSNK1E-202ENST00000366216 TRUB2O95900 331 aaKnown RBP11.61□□□□□ -0.55
CSNK1E-202ENST00000366216 KRT1P04264 644 aa11.61□□□□□ -0.55
CSNK1E-202ENST00000366216 RARAP10276 462 aa11.61□□□□□ -0.55
CSNK1E-202ENST00000366216 LCP1P13796 627 aa11.61□□□□□ -0.55
CSNK1E-202ENST00000366216 TCF4P15884 667 aa11.61□□□□□ -0.55
CSNK1E-202ENST00000366216 DDX6P26196 483 aaKnown RBP eCLIP11.61□□□□□ -0.55
CSNK1E-202ENST00000366216 MIPP30301 263 aa11.61□□□□□ -0.55
CSNK1E-202ENST00000366216 SDC4P31431 198 aa11.61□□□□□ -0.55
CSNK1E-202ENST00000366216 FNTAP49354 379 aa11.61□□□□□ -0.55
CSNK1E-202ENST00000366216 TUFMP49411 452 aaKnown RBP11.61□□□□□ -0.55
CSNK1E-202ENST00000366216 GPR15P49685 360 aa11.61□□□□□ -0.55
CSNK1E-202ENST00000366216 MAP3K7CLP57077 242 aa11.61□□□□□ -0.55
CSNK1E-202ENST00000366216 SLC7A5Q01650 507 aa11.61□□□□□ -0.55
CSNK1E-202ENST00000366216 KLF1Q13351 362 aaPredicted RBP11.61□□□□□ -0.55
CSNK1E-202ENST00000366216 TAF12Q16514 161 aa11.61□□□□□ -0.55
CSNK1E-202ENST00000366216 CCDC142Q17RM4 750 aa11.61□□□□□ -0.55
CSNK1E-202ENST00000366216 TMEM92Q6UXU6 159 aa11.61□□□□□ -0.55
CSNK1E-202ENST00000366216 SPOCD1Q6ZMY3 1216 aa11.61□□□□□ -0.55
CSNK1E-202ENST00000366216 C4orf50Q6ZRC1 276 aa11.61□□□□□ -0.55
CSNK1E-202ENST00000366216 SCML4Q8N228 414 aa11.61□□□□□ -0.55
CSNK1E-202ENST00000366216 CCDC33Q8N5R6 958 aa11.61□□□□□ -0.55
CSNK1E-202ENST00000366216 ZMIZ2Q8NF64 920 aa11.61□□□□□ -0.55
CSNK1E-202ENST00000366216 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.61□□□□□ -0.55
CSNK1E-202ENST00000366216 SLC39A7Q92504 469 aa11.61□□□□□ -0.55
CSNK1E-202ENST00000366216 CENPIQ92674 756 aaPredicted RBP11.61□□□□□ -0.55
CSNK1E-202ENST00000366216 MAGOHBQ96A72 148 aaKnown RBP11.61□□□□□ -0.55
CSNK1E-202ENST00000366216 SLITRK1Q96PX8 696 aa11.61□□□□□ -0.55
CSNK1E-202ENST00000366216 SMOQ99835 787 aa11.61□□□□□ -0.55
CSNK1E-202ENST00000366216 LRRC19Q9H756 370 aa11.61□□□□□ -0.55
CSNK1E-202ENST00000366216 CAPN10Q9HC96 672 aa11.61□□□□□ -0.55
CSNK1E-202ENST00000366216 CNGB3Q9NQW8 809 aa11.61□□□□□ -0.55
CSNK1E-202ENST00000366216 DNAAF2Q9NVR5 837 aaKnown RBP11.61□□□□□ -0.55
CSNK1E-202ENST00000366216 A0A087WV48 116 aa11.6□□□□□ -0.55
CSNK1E-202ENST00000366216 HHLA1C9JL84 531 aa11.6□□□□□ -0.55
CSNK1E-202ENST00000366216 K7EQS6 105 aa11.6□□□□□ -0.55
CSNK1E-202ENST00000366216 SH3BP5O60239 455 aa11.6□□□□□ -0.55
CSNK1E-202ENST00000366216 DAB1O75553 588 aa11.6□□□□□ -0.55
CSNK1E-202ENST00000366216 TJP3O95049 919 aa11.6□□□□□ -0.55
CSNK1E-202ENST00000366216 RALAP11233 206 aa11.6□□□□□ -0.55
CSNK1E-202ENST00000366216 IL1R2P27930 398 aa11.6□□□□□ -0.55
CSNK1E-202ENST00000366216 ADIGQ0VDE8 80 aa11.6□□□□□ -0.55
CSNK1E-202ENST00000366216 SLC14A1Q13336 389 aa11.6□□□□□ -0.55
CSNK1E-202ENST00000366216 TAF5Q15542 800 aa11.6□□□□□ -0.55
CSNK1E-202ENST00000366216 TAZQ16635 292 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms