RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 PJA2O43164 708 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 FAM20BO75063 409 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 CDKL5O76039 1030 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 ENDOD1O94919 500 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 SLITRK3O94933 977 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 SCAF4O95104 1147 aaKnown RBP5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 BAG4O95429 457 aaKnown RBP5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 CTDNEP1O95476 244 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 XBP1P17861 261 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 ARF4P18085 180 aaPredicted RBP5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 RPL17P18621 184 aaKnown RBP5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 AOC1P19801 751 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 AKAP5P24588 427 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 AXLP30530 894 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 HMGA2P52926 109 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 PTENP60484 403 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 SLC25A3Q00325 362 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 MBTD1Q05BQ5 628 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 DSC1Q08554 894 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 NCBP1Q09161 790 aaKnown RBP5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 KLF1Q13351 362 aaPredicted RBP5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 CAPSQ13938 189 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 TFDP1Q14186 410 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 MXD4Q14582 209 aaPredicted RBP5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 ANGPT1Q15389 498 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 PRAMEF14Q5SWL7 426 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 FNDC7Q5VTL7 733 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 FUT10Q6P4F1 479 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 GET4Q7L5D6 327 aaPredicted RBP5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 MAEAQ7L5Y9 396 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 GPRIN1Q7Z2K8 1008 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 CMIPQ8IY22 773 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 CCDC105Q8IYK2 499 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 RNF168Q8IYW5 571 aaPredicted RBP5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 FAM177A1Q8N128 213 aaPredicted RBP5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 ADSSL1Q8N142 457 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 CNNM3Q8NE01 707 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 CMASQ8NFW8 434 aaPredicted RBP5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 OR10H5Q8NGA6 315 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 ZFP28Q8NHY6 868 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 CPT1CQ8TCG5 803 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 HASPINQ8TF76 798 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 STAMQ92783 540 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 ZNF707Q96C28 371 aaPredicted RBP5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 CCDC43Q96MW1 224 aaKnown RBP5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 DCLRE1CQ96SD1 692 aaKnown RBP5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 EIF2AK1Q9BQI3 630 aaKnown RBP5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 NDC1Q9BTX1 674 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 COLEC11Q9BWP8 271 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 TM6SF1Q9BZW5 370 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 WDR6Q9NNW5 1121 aaKnown RBP5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 UBN1Q9NPG3 1134 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 LANCL2Q9NS86 450 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 IGSF9Q9P2J2 1179 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 ORC3Q9UBD5 711 aaPredicted RBP5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 STK39Q9UEW8 545 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 SCOCQ9UIL1 159 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 TPCN1Q9ULQ1 816 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 CA14Q9ULX7 337 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 SSX2IPQ9Y2D8 614 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 MYH15Q9Y2K3 1946 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 STK36Q9NRP7 1315 aa5.69□□□□□ -1.5
RNU4-4P-201ENST00000364588 TRIP11Q15643 1979 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 CASTOR2A6NHX0 329 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 LRRIQ4A6NIV6 560 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 FAM171A2A8MVW0 826 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 USO1O60763 962 aaKnown RBP5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 PFKFB2O60825 505 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 DCNP07585 359 aaKnown RBP5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 GLRA2P23416 452 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 KRT2P35908 639 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 ARL2P36404 184 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 GPR3P46089 330 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 MTNR1BP49286 362 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 RARRES1P49788 294 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 NTHL1P78549 312 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 SP140Q13342 867 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 CALCRLQ16602 461 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 USP41Q3LFD5 358 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 SPECC1Q5M775 1068 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 IGFL4Q6B9Z1 124 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 SLC27A1Q6PCB7 646 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 PRSS55Q6UWB4 352 aaPredicted RBP5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 ZNF572Q7Z3I7 529 aaPredicted RBP5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 PLXDC1Q8IUK5 500 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 HACE1Q8IYU2 909 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 SLC44A3Q8N4M1 653 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 NECAB1Q8N987 351 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 KCNG4Q8TDN1 519 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 PIGOQ8TEQ8 1089 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 NEU4Q8WWR8 484 aaPredicted RBP5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 TFAP2CQ92754 450 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 CLIP3Q96DZ5 547 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 CCDC51Q96ER9 411 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 NAP1L4Q99733 375 aaKnown RBP5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 RTP3Q9BQQ7 232 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 PAAF1Q9BRP4 392 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 SLC46A2Q9BY10 475 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 TRIM8Q9BZR9 551 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 NT5C3AQ9H0P0 336 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms