RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 WNT7BP56706 349 aa19.44■□□□□ 0.7
CMTM3-201ENST00000361909 NKX3-2P78367 333 aa19.44■□□□□ 0.7
CMTM3-201ENST00000361909 PLOD1Q02809 727 aaPredicted RBP19.44■□□□□ 0.7
CMTM3-201ENST00000361909 MFSD10Q14728 455 aa19.44■□□□□ 0.7
CMTM3-201ENST00000361909 FSCN1Q16658 493 aaKnown RBP19.44■□□□□ 0.7
CMTM3-201ENST00000361909 ZNF423Q2M1K9 1284 aa19.44■□□□□ 0.7
CMTM3-201ENST00000361909 CCDC153Q494R4 210 aa19.44■□□□□ 0.7
CMTM3-201ENST00000361909 C16orf46Q6P387 395 aa19.44■□□□□ 0.7
CMTM3-201ENST00000361909 RSPH3Q86UC2 560 aa19.44■□□□□ 0.7
CMTM3-201ENST00000361909 PGAM4Q8N0Y7 254 aa19.44■□□□□ 0.7
CMTM3-201ENST00000361909 PHTF2Q8N3S3 785 aa19.44■□□□□ 0.7
CMTM3-201ENST00000361909 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.44■□□□□ 0.7
CMTM3-201ENST00000361909 SIGLEC10Q96LC7 697 aa19.44■□□□□ 0.7
CMTM3-201ENST00000361909 CDH19Q9H159 772 aa19.44■□□□□ 0.7
CMTM3-201ENST00000361909 PNPOQ9NVS9 261 aa19.44■□□□□ 0.7
CMTM3-201ENST00000361909 ASNSD1Q9NWL6 643 aa19.44■□□□□ 0.7
CMTM3-201ENST00000361909 USP18Q9UMW8 372 aa19.44■□□□□ 0.7
CMTM3-201ENST00000361909 KCNN4O15554 427 aa19.44■□□□□ 0.7
CMTM3-201ENST00000361909 ALDH1A2O94788 518 aa19.44■□□□□ 0.7
CMTM3-201ENST00000361909 ZBED1O96006 694 aa19.44■□□□□ 0.7
CMTM3-201ENST00000361909 SMIM10L2AP0DMW4 78 aa19.44■□□□□ 0.7
CMTM3-201ENST00000361909 SMIM10L2BP0DMW5 78 aa19.44■□□□□ 0.7
CMTM3-201ENST00000361909 RALBP11234 206 aa19.44■□□□□ 0.7
CMTM3-201ENST00000361909 MIPP30301 263 aa19.44■□□□□ 0.7
CMTM3-201ENST00000361909 MRPS22P82650 360 aaKnown RBP19.44■□□□□ 0.7
CMTM3-201ENST00000361909 PRKCZQ05513 592 aa19.44■□□□□ 0.7
CMTM3-201ENST00000361909 RFTN1Q14699 578 aaPredicted RBP19.44■□□□□ 0.7
CMTM3-201ENST00000361909 PTPN20Q4JDL3 420 aa19.44■□□□□ 0.7
CMTM3-201ENST00000361909 SYCP2LQ5T4T6 812 aa19.44■□□□□ 0.7
CMTM3-201ENST00000361909 AMIGO2Q86SJ2 522 aa19.44■□□□□ 0.7
CMTM3-201ENST00000361909 KIAA0319LQ8IZA0 1049 aa19.44■□□□□ 0.7
CMTM3-201ENST00000361909 ZNF513Q8N8E2 541 aaPredicted RBP19.44■□□□□ 0.7
CMTM3-201ENST00000361909 TRPV1Q8NER1 839 aa19.44■□□□□ 0.7
CMTM3-201ENST00000361909 JOSD2Q8TAC2 188 aa19.44■□□□□ 0.7
CMTM3-201ENST00000361909 HSPBAP1Q96EW2 488 aa19.44■□□□□ 0.7
CMTM3-201ENST00000361909 PNPLA3Q9NST1 481 aa19.44■□□□□ 0.7
CMTM3-201ENST00000361909 SETD4Q9NVD3 440 aa19.44■□□□□ 0.7
CMTM3-201ENST00000361909 TUBA8Q9NY65 449 aaPredicted RBP19.44■□□□□ 0.7
CMTM3-201ENST00000361909 COPG2Q9UBF2 871 aa19.44■□□□□ 0.7
CMTM3-201ENST00000361909 TNFSF13BQ9Y275 285 aa19.44■□□□□ 0.7
CMTM3-201ENST00000361909 LOC100653049A0A140TA62 436 aa19.43■□□□□ 0.7
CMTM3-201ENST00000361909 RGSL1A5PLK6 1076 aa19.43■□□□□ 0.7
CMTM3-201ENST00000361909 OGTO15294 1046 aa19.43■□□□□ 0.7
CMTM3-201ENST00000361909 CLASP2O75122 1294 aaKnown RBP19.43■□□□□ 0.7
CMTM3-201ENST00000361909 BCAS2O75934 225 aaPredicted RBP19.43■□□□□ 0.7
CMTM3-201ENST00000361909 KRT34O76011 436 aa19.43■□□□□ 0.7
CMTM3-201ENST00000361909 BMP10O95393 424 aa19.43■□□□□ 0.7
CMTM3-201ENST00000361909 GLDCP23378 1020 aa19.43■□□□□ 0.7
CMTM3-201ENST00000361909 VARSP26640 1264 aaKnown RBP19.43■□□□□ 0.7
CMTM3-201ENST00000361909 ACOT2P49753 483 aa19.43■□□□□ 0.7
CMTM3-201ENST00000361909 PSEN2P49810 448 aa19.43■□□□□ 0.7
CMTM3-201ENST00000361909 NUDT2P50583 147 aa19.43■□□□□ 0.7
CMTM3-201ENST00000361909 GJA9P57773 515 aa19.43■□□□□ 0.7
CMTM3-201ENST00000361909 C6orf52Q5T4I8 152 aa19.43■□□□□ 0.7
CMTM3-201ENST00000361909 ATF7IP2Q5U623 682 aa19.43■□□□□ 0.7
CMTM3-201ENST00000361909 MPZL3Q6UWV2 235 aa19.43■□□□□ 0.7
CMTM3-201ENST00000361909 NCCRP1Q6ZVX7 275 aaPredicted RBP19.43■□□□□ 0.7
CMTM3-201ENST00000361909 SNRNP27Q8WVK2 155 aaKnown RBP19.43■□□□□ 0.7
CMTM3-201ENST00000361909 HSPH1Q92598 858 aa19.43■□□□□ 0.7
CMTM3-201ENST00000361909 ZNF597Q96LX8 424 aa19.43■□□□□ 0.7
CMTM3-201ENST00000361909 FERMT1Q9BQL6 677 aa19.43■□□□□ 0.7
CMTM3-201ENST00000361909 TCHPQ9BT92 498 aa19.43■□□□□ 0.7
CMTM3-201ENST00000361909 CISHQ9NSE2 258 aa19.43■□□□□ 0.7
CMTM3-201ENST00000361909 HACD3Q9P035 362 aa19.43■□□□□ 0.7
CMTM3-201ENST00000361909 CNTNAP2Q9UHC6 1331 aa19.43■□□□□ 0.7
CMTM3-201ENST00000361909 BARX2Q9UMQ3 279 aaPredicted RBP19.43■□□□□ 0.7
CMTM3-201ENST00000361909 MYRFQ9Y2G1 1151 aa19.43■□□□□ 0.7
CMTM3-201ENST00000361909 A0A087WZ62 844 aa19.43■□□□□ 0.7
CMTM3-201ENST00000361909 SMIM35A0A1B0GVV1 85 aa19.43■□□□□ 0.7
CMTM3-201ENST00000361909 APRTP07741 180 aa19.43■□□□□ 0.7
CMTM3-201ENST00000361909 PSMC1P62191 440 aaKnown RBP19.43■□□□□ 0.7
CMTM3-201ENST00000361909 ADAM17P78536 824 aa19.43■□□□□ 0.7
CMTM3-201ENST00000361909 WDR49Q8IV35 697 aa19.43■□□□□ 0.7
CMTM3-201ENST00000361909 PDCD6IPQ8WUM4 868 aaKnown RBP19.43■□□□□ 0.7
CMTM3-201ENST00000361909 ITPKCQ96DU7 683 aa19.43■□□□□ 0.7
CMTM3-201ENST00000361909 FDXACB1Q9BRP7 624 aaPredicted RBP19.43■□□□□ 0.7
CMTM3-201ENST00000361909 SHCBP1LQ9BZQ2 653 aa19.43■□□□□ 0.7
CMTM3-201ENST00000361909 MRPL40Q9NQ50 206 aaKnown RBP19.43■□□□□ 0.7
CMTM3-201ENST00000361909 TBC1D23Q9NUY8 699 aa19.43■□□□□ 0.7
CMTM3-201ENST00000361909 MATN2O00339 956 aa19.42■□□□□ 0.7
CMTM3-201ENST00000361909 ZBTB14O43829 449 aa19.42■□□□□ 0.7
CMTM3-201ENST00000361909 KCNA4P22459 653 aa19.42■□□□□ 0.7
CMTM3-201ENST00000361909 HOXD10P28358 340 aa19.42■□□□□ 0.7
CMTM3-201ENST00000361909 MAGEA10P43363 369 aaPredicted RBP19.42■□□□□ 0.7
CMTM3-201ENST00000361909 PDE1CQ14123 709 aaPredicted RBP19.42■□□□□ 0.7
CMTM3-201ENST00000361909 PDK2Q15119 407 aa19.42■□□□□ 0.7
CMTM3-201ENST00000361909 C10orf107Q8IVU9 208 aa19.42■□□□□ 0.7
CMTM3-201ENST00000361909 CDKL3Q8IVW4 592 aaPredicted RBP19.42■□□□□ 0.7
CMTM3-201ENST00000361909 TOP1MTQ969P6 601 aa19.42■□□□□ 0.7
CMTM3-201ENST00000361909 SGF29Q96ES7 293 aa19.42■□□□□ 0.7
CMTM3-201ENST00000361909 UPF3AQ9H1J1 476 aaKnown RBP19.42■□□□□ 0.7
CMTM3-201ENST00000361909 MINDY3Q9H8M7 445 aa19.42■□□□□ 0.7
CMTM3-201ENST00000361909 COPS7BQ9H9Q2 264 aaPredicted RBP19.42■□□□□ 0.7
CMTM3-201ENST00000361909 ARHGEF38Q9NXL2 777 aa19.42■□□□□ 0.7
CMTM3-201ENST00000361909 EPS15L1Q9UBC2 864 aa19.42■□□□□ 0.7
CMTM3-201ENST00000361909 PCDHGB4Q9UN71 923 aa19.42■□□□□ 0.7
CMTM3-201ENST00000361909 PCDHGB5Q9Y5G0 923 aa19.42■□□□□ 0.7
CMTM3-201ENST00000361909 SEPT4O43236 478 aa19.42■□□□□ 0.7
CMTM3-201ENST00000361909 VTNP04004 478 aa19.42■□□□□ 0.7
CMTM3-201ENST00000361909 MYL3P08590 195 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms