RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 KLHL8Q9P2G9 620 aaPredicted RBP10.81□□□□□ -0.68
SMC3-201ENST00000361804 PEX1O43933 1283 aa10.81□□□□□ -0.68
SMC3-201ENST00000361804 HBP1O60381 514 aa10.81□□□□□ -0.68
SMC3-201ENST00000361804 MT-CO1P00395 513 aa10.81□□□□□ -0.68
SMC3-201ENST00000361804 TGFB3P10600 412 aa10.81□□□□□ -0.68
SMC3-201ENST00000361804 C6orf52Q5T4I8 152 aa10.81□□□□□ -0.68
SMC3-201ENST00000361804 TIFABQ6ZNK6 161 aa10.81□□□□□ -0.68
SMC3-201ENST00000361804 FBXW8Q8N3Y1 598 aa10.81□□□□□ -0.68
SMC3-201ENST00000361804 RNF139Q8WU17 664 aa10.81□□□□□ -0.68
SMC3-201ENST00000361804 RCN3Q96D15 328 aa10.81□□□□□ -0.68
SMC3-201ENST00000361804 GPAMQ9HCL2 828 aa10.81□□□□□ -0.68
SMC3-201ENST00000361804 IARS2Q9NSE4 1012 aaKnown RBP10.81□□□□□ -0.68
SMC3-201ENST00000361804 ETAA1Q9NY74 926 aa10.81□□□□□ -0.68
SMC3-201ENST00000361804 C15orf38-AP3S2A0A0A6YYH1 394 aa10.81□□□□□ -0.68
SMC3-201ENST00000361804 CCDC160A6NGH7 325 aa10.81□□□□□ -0.68
SMC3-201ENST00000361804 PGAM1P18669 254 aa10.81□□□□□ -0.68
SMC3-201ENST00000361804 HOXA11P31270 313 aaPredicted RBP10.81□□□□□ -0.68
SMC3-201ENST00000361804 ATICP31939 592 aa10.81□□□□□ -0.68
SMC3-201ENST00000361804 STEAP4Q687X5 459 aa10.81□□□□□ -0.68
SMC3-201ENST00000361804 LRRC8BQ6P9F7 803 aa10.81□□□□□ -0.68
SMC3-201ENST00000361804 TMC7Q7Z402 723 aa10.81□□□□□ -0.68
SMC3-201ENST00000361804 ARPINQ7Z6K5 226 aa10.81□□□□□ -0.68
SMC3-201ENST00000361804 LILRA2Q8N149 483 aa10.81□□□□□ -0.68
SMC3-201ENST00000361804 NPWQ8N729 165 aa10.81□□□□□ -0.68
SMC3-201ENST00000361804 KBTBD7Q8WVZ9 684 aa10.81□□□□□ -0.68
SMC3-201ENST00000361804 CDKL2Q92772 493 aa10.81□□□□□ -0.68
SMC3-201ENST00000361804 CELF6Q96J87 481 aaKnown RBP10.81□□□□□ -0.68
SMC3-201ENST00000361804 C11orf84Q9BUA3 381 aaPredicted RBP10.81□□□□□ -0.68
SMC3-201ENST00000361804 ASB7Q9H672 318 aa10.81□□□□□ -0.68
SMC3-201ENST00000361804 PIGVQ9NUD9 493 aa10.81□□□□□ -0.68
SMC3-201ENST00000361804 FLRT1Q9NZU1 646 aa10.81□□□□□ -0.68
SMC3-201ENST00000361804 GMPR2Q9P2T1 348 aaKnown RBP10.81□□□□□ -0.68
SMC3-201ENST00000361804 HEMK1Q9Y5R4 338 aaPredicted RBP10.81□□□□□ -0.68
SMC3-201ENST00000361804 M0QYT0 321 aa10.8□□□□□ -0.68
SMC3-201ENST00000361804 FKBP6O75344 327 aa10.8□□□□□ -0.68
SMC3-201ENST00000361804 RTN3O95197 1032 aaPredicted RBP10.8□□□□□ -0.68
SMC3-201ENST00000361804 KLHL2O95198 593 aa10.8□□□□□ -0.68
SMC3-201ENST00000361804 C2P06681 752 aa10.8□□□□□ -0.68
SMC3-201ENST00000361804 FGFR3P22607 806 aa10.8□□□□□ -0.68
SMC3-201ENST00000361804 PMLP29590 882 aa10.8□□□□□ -0.68
SMC3-201ENST00000361804 ARL4AP40617 200 aa10.8□□□□□ -0.68
SMC3-201ENST00000361804 ADCYAP1R1P41586 468 aa10.8□□□□□ -0.68
SMC3-201ENST00000361804 GSTA3Q16772 222 aa10.8□□□□□ -0.68
SMC3-201ENST00000361804 ACAD11Q709F0 780 aa10.8□□□□□ -0.68
SMC3-201ENST00000361804 PIP4K2CQ8TBX8 421 aa10.8□□□□□ -0.68
SMC3-201ENST00000361804 NPAS2Q99743 824 aa10.8□□□□□ -0.68
SMC3-201ENST00000361804 ITGA11Q9UKX5 1188 aa10.8□□□□□ -0.68
SMC3-201ENST00000361804 TLL2Q9Y6L7 1015 aa10.8□□□□□ -0.68
SMC3-201ENST00000361804 ZBTB24O43167 697 aaPredicted RBP10.8□□□□□ -0.68
SMC3-201ENST00000361804 RPL10P27635 214 aaKnown RBP10.8□□□□□ -0.68
SMC3-201ENST00000361804 ALDH1A3P47895 512 aa10.8□□□□□ -0.68
SMC3-201ENST00000361804 NAGLUP54802 743 aa10.8□□□□□ -0.68
SMC3-201ENST00000361804 PDK1Q15118 436 aa10.8□□□□□ -0.68
SMC3-201ENST00000361804 LSM12Q3MHD2 195 aaKnown RBP10.8□□□□□ -0.68
SMC3-201ENST00000361804 PIGZQ86VD9 579 aa10.8□□□□□ -0.68
SMC3-201ENST00000361804 OSMRQ99650 979 aa10.8□□□□□ -0.68
SMC3-201ENST00000361804 GRIP2Q9C0E4 1043 aa10.8□□□□□ -0.68
SMC3-201ENST00000361804 CDH19Q9H159 772 aa10.8□□□□□ -0.68
SMC3-201ENST00000361804 SEMA6AQ9H2E6 1030 aa10.8□□□□□ -0.68
SMC3-201ENST00000361804 VRTNQ9H8Y1 702 aa10.8□□□□□ -0.68
SMC3-201ENST00000361804 DDX18Q9NVP1 670 aaKnown RBP10.8□□□□□ -0.68
SMC3-201ENST00000361804 DCDC2Q9UHG0 476 aa10.8□□□□□ -0.68
SMC3-201ENST00000361804 ZDHHC2Q9UIJ5 367 aa10.8□□□□□ -0.68
SMC3-201ENST00000361804 NEMP2A6NFY4 417 aa10.8□□□□□ -0.68
SMC3-201ENST00000361804 NMBRP28336 390 aa10.8□□□□□ -0.68
SMC3-201ENST00000361804 CDKL1Q00532 357 aa10.8□□□□□ -0.68
SMC3-201ENST00000361804 SOX4Q06945 474 aaPredicted RBP10.8□□□□□ -0.68
SMC3-201ENST00000361804 IFRD2Q12894 506 aaPredicted RBP10.8□□□□□ -0.68
SMC3-201ENST00000361804 METTL25Q8N6Q8 603 aa10.8□□□□□ -0.68
SMC3-201ENST00000361804 GRIN3AQ8TCU5 1115 aa10.8□□□□□ -0.68
SMC3-201ENST00000361804 TMA16Q96EY4 203 aaKnown RBP10.8□□□□□ -0.68
SMC3-201ENST00000361804 DCUN1D1Q96GG9 259 aa10.8□□□□□ -0.68
SMC3-201ENST00000361804 NDNQ99608 321 aa10.8□□□□□ -0.68
SMC3-201ENST00000361804 FRMD8Q9BZ67 464 aaPredicted RBP10.8□□□□□ -0.68
SMC3-201ENST00000361804 SETD4Q9NVD3 440 aa10.8□□□□□ -0.68
SMC3-201ENST00000361804 ERAP1Q9NZ08 941 aa10.8□□□□□ -0.68
SMC3-201ENST00000361804 FZD10Q9ULW2 581 aa10.8□□□□□ -0.68
SMC3-201ENST00000361804 MTF2Q9Y483 593 aaPredicted RBP10.8□□□□□ -0.68
SMC3-201ENST00000361804 TIMM13Q9Y5L4 95 aaPredicted RBP10.8□□□□□ -0.68
SMC3-201ENST00000361804 PIK3R1P27986 724 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 CTGFP29279 349 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 GP5P40197 560 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 ZBTB17Q13105 803 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 EPGNQ6UW88 154 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 UGT2A3Q6UWM9 527 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 IFNLR1Q8IU57 520 aaPredicted RBP10.79□□□□□ -0.68
SMC3-201ENST00000361804 FAM110BQ8TC76 370 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 KCTD4Q8WVF5 259 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 SYT17Q9BSW7 474 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 RHOBTB2Q9BYZ6 727 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 TASP1Q9H6P5 420 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 TCF7L2Q9NQB0 619 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 C20orf96Q9NUD7 363 aaPredicted RBP10.79□□□□□ -0.68
SMC3-201ENST00000361804 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.79□□□□□ -0.686e-9■■■□□ 18.6
SMC3-201ENST00000361804 DTNAQ9Y4J8 743 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 SCN10AQ9Y5Y9 1956 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 NRP1O14786 923 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 TRPA1O75762 1119 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 CSPG5O95196 566 aa10.79□□□□□ -0.68
SMC3-201ENST00000361804 POLBP06746 335 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms