RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 MRASO14807 208 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 ACSL4O60488 711 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 KRT36O76013 467 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 MYBPC3Q14896 1274 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 PLET1Q6UQ28 207 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 PLAGL2Q9UPG8 496 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 TNPO3Q9Y5L0 923 aaKnown RBP9.44□□□□□ -0.9
VPS13A-203ENST00000360280 ATXN2Q99700 1313 aaKnown RBP9.44□□□□□ -0.9
VPS13A-203ENST00000360280 DCXO43602 365 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 SLC25A12O75746 678 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 TNNI3P19429 210 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 RNF19BQ6ZMZ0 732 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 QRFPRQ96P65 431 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 C1QTNF7Q9BXJ2 289 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 SLC9A8Q9Y2E8 581 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 PSMD11O00231 422 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 ALDH7A1P49419 539 aaKnown RBP9.44□□□□□ -0.9
VPS13A-203ENST00000360280 PTENP60484 403 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 PROSER3Q2NL68 480 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 PTCD2Q8WV60 388 aaKnown RBP9.44□□□□□ -0.9
VPS13A-203ENST00000360280 OSGEPL1Q9H4B0 414 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 METTL18O95568 372 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 PGAM1P18669 254 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 CPT1AP50416 773 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 IL18Q14116 193 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 TCEA2Q15560 299 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 BSNDQ8WZ55 320 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 UBE2E3Q969T4 207 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 GMPPBQ9Y5P6 360 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 KCNQ3O43525 872 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 PRLP01236 227 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 ACAT1P24752 427 aaKnown RBP9.44□□□□□ -0.9
VPS13A-203ENST00000360280 PBLDP30039 288 aaPredicted RBP9.44□□□□□ -0.9
VPS13A-203ENST00000360280 GRB14Q14449 540 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 PAGE2BQ5JRK9 111 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 YTHDF3Q7Z739 585 aaKnown RBP9.44□□□□□ -0.9
VPS13A-203ENST00000360280 SKA1Q96BD8 255 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 MORF4L1Q9UBU8 362 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 VPS28Q9UK41 221 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 RNF17Q9BXT8 1623 aaKnown RBP9.44□□□□□ -0.9
VPS13A-203ENST00000360280 INO80Q9ULG1 1556 aaPredicted RBP9.44□□□□□ -0.9
VPS13A-203ENST00000360280 SGTAO43765 313 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 OGNP20774 298 aaKnown RBP9.44□□□□□ -0.9
VPS13A-203ENST00000360280 SDC2P34741 201 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 PDK3Q15120 406 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 GIPC3Q8TF64 312 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 ZNF224Q9NZL3 707 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 CEP170Q5SW79 1584 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 FCHO1O14526 889 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 OR56A5P0C7T3 313 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 CSHL1Q14406 222 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 ARHGAP36Q6ZRI8 547 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 ACOT12Q8WYK0 555 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 REXO5Q96IC2 774 aaKnown RBP9.44□□□□□ -0.9
VPS13A-203ENST00000360280 PANX3Q96QZ0 392 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 PHF20Q9BVI0 1012 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 SEMA6AQ9H2E6 1030 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 UPB1Q9UBR1 384 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 PPIEQ9UNP9 301 aaKnown RBP9.44□□□□□ -0.9
VPS13A-203ENST00000360280 PLCL2Q9UPR0 1127 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 DHRS7Q9Y394 339 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 ZC3H13Q5T200 1668 aaKnown RBP9.44□□□□□ -0.9
VPS13A-203ENST00000360280 NOS1APO75052 506 aaPredicted RBP9.44□□□□□ -0.9
VPS13A-203ENST00000360280 RLN1P04808 185 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 MYBP10242 640 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 STK40Q8N2I9 435 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 N6AMT1Q9Y5N5 214 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 G3V2T6 193 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 SERPINF2P08697 491 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 ZNF806P0C7X5 589 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 CDH4P55283 916 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 TKFCQ3LXA3 575 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 TELO2Q9Y4R8 837 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 AK5Q9Y6K8 562 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 A2ML1A8K2U0 1454 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 H3BNX3 289 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 TFECO14948 347 aaPredicted RBP9.44□□□□□ -0.9
VPS13A-203ENST00000360280 CCNKO75909 580 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 CBWD3Q5JTY5 395 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 CBWD5Q5RIA9 395 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 ATXN10Q9UBB4 475 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 OPTCQ9UBM4 332 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 ANGPT4Q9Y264 503 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 MFHAS1Q9Y4C4 1052 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 SQORQ9Y6N5 450 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 IQGAP3Q86VI3 1631 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 AXIN1O15169 862 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 MTA2O94776 668 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 ZNF7P17097 686 aaPredicted RBP9.44□□□□□ -0.9
VPS13A-203ENST00000360280 S100A3P33764 101 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 RHOAP61586 193 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 PRKCEQ02156 737 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 TEX47Q8TBZ9 253 aa9.44□□□□□ -0.9
VPS13A-203ENST00000360280 MOV10Q9HCE1 1003 aaKnown RBP9.44□□□□□ -0.9
VPS13A-203ENST00000360280 F5H6K3 240 aa9.43□□□□□ -0.9
VPS13A-203ENST00000360280 THRBP10828 461 aa9.43□□□□□ -0.9
VPS13A-203ENST00000360280 ACADMP11310 421 aa9.43□□□□□ -0.9
VPS13A-203ENST00000360280 FGFR2P21802 821 aa9.43□□□□□ -0.9
VPS13A-203ENST00000360280 ACTR3P61158 418 aa9.43□□□□□ -0.9
VPS13A-203ENST00000360280 KLRC3Q07444 240 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms