RNA–Protein interactions for RNA: ENST00000359902.2

CCDC88B-203, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 1 (best) BASIC

Gene CCDC88B, Length 2,326 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-203ENST00000359902 FSTL4Q6MZW2 842 aa21.27■□□□□ 0.99
CCDC88B-203ENST00000359902 ATG14Q6ZNE5 492 aa21.27■□□□□ 0.99
CCDC88B-203ENST00000359902 CNTD1Q8N815 330 aa21.27■□□□□ 0.99
CCDC88B-203ENST00000359902 PIWIL2Q8TC59 973 aaKnown RBP21.27■□□□□ 0.99
CCDC88B-203ENST00000359902 TRIB2Q92519 343 aa21.27■□□□□ 0.99
CCDC88B-203ENST00000359902 RILPQ96NA2 401 aa21.27■□□□□ 0.99
CCDC88B-203ENST00000359902 SPC25Q9HBM1 224 aa21.27■□□□□ 0.99
CCDC88B-203ENST00000359902 CHRAC1Q9NRG0 131 aa21.27■□□□□ 0.99
CCDC88B-203ENST00000359902 UBP1Q9NZI7 540 aa21.27■□□□□ 0.99
CCDC88B-203ENST00000359902 COPG2Q9UBF2 871 aa21.27■□□□□ 0.99
CCDC88B-203ENST00000359902 MAGED2Q9UNF1 606 aaPredicted RBP21.27■□□□□ 0.99
CCDC88B-203ENST00000359902 NEU3Q9UQ49 428 aa21.27■□□□□ 0.99
CCDC88B-203ENST00000359902 SHROOM3Q8TF72 1996 aa21.26■□□□□ 0.99
CCDC88B-203ENST00000359902 ATP5BP06576 529 aaKnown RBP21.26■□□□□ 0.99
CCDC88B-203ENST00000359902 TPH1P17752 444 aa21.26■□□□□ 0.99
CCDC88B-203ENST00000359902 TEX9Q8N6V9 391 aa21.26■□□□□ 0.99
CCDC88B-203ENST00000359902 RSPH1Q8WYR4 309 aa21.26■□□□□ 0.99
CCDC88B-203ENST00000359902 ATXN7L3BQ96GX2 97 aa21.26■□□□□ 0.99
CCDC88B-203ENST00000359902 CCDC106Q9BWC9 280 aa21.26■□□□□ 0.99
CCDC88B-203ENST00000359902 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.26■□□□□ 0.99
CCDC88B-203ENST00000359902 DSEQ9UL01 958 aa21.26■□□□□ 0.99
CCDC88B-203ENST00000359902 E2F8A0AVK6 867 aa21.26■□□□□ 0.99
CCDC88B-203ENST00000359902 ENO1P06733 434 aaKnown RBP21.26■□□□□ 0.99
CCDC88B-203ENST00000359902 KHDC1Q4VXA5 237 aaKnown RBP21.26■□□□□ 0.99
CCDC88B-203ENST00000359902 RWDD4Q6NW29 188 aaKnown RBP21.26■□□□□ 0.99
CCDC88B-203ENST00000359902 BEND5Q7L4P6 421 aa21.26■□□□□ 0.99
CCDC88B-203ENST00000359902 WDR75Q8IWA0 830 aaKnown RBP21.26■□□□□ 0.99
CCDC88B-203ENST00000359902 KCNV2Q8TDN2 545 aa21.26■□□□□ 0.99
CCDC88B-203ENST00000359902 MCUR1Q96AQ8 359 aa21.26■□□□□ 0.99
CCDC88B-203ENST00000359902 SIKE1Q9BRV8 207 aa21.26■□□□□ 0.99
CCDC88B-203ENST00000359902 IL22Q9GZX6 179 aa21.26■□□□□ 0.99
CCDC88B-203ENST00000359902 SIK2Q9H0K1 926 aa21.26■□□□□ 0.99
CCDC88B-203ENST00000359902 ARHGEF38Q9NXL2 777 aa21.26■□□□□ 0.99
CCDC88B-203ENST00000359902 B2RBV5 119 aa21.25■□□□□ 0.99
CCDC88B-203ENST00000359902 SERPINA6P08185 405 aa21.25■□□□□ 0.99
CCDC88B-203ENST00000359902 GRK2P25098 689 aa21.25■□□□□ 0.99
CCDC88B-203ENST00000359902 CPA2P48052 419 aa21.25■□□□□ 0.99
CCDC88B-203ENST00000359902 SERPINB8P50452 374 aa21.25■□□□□ 0.99
CCDC88B-203ENST00000359902 ALDH18A1P54886 795 aaKnown RBP21.25■□□□□ 0.99
CCDC88B-203ENST00000359902 TUSC3Q13454 348 aa21.25■□□□□ 0.99
CCDC88B-203ENST00000359902 MFSD14CQ5VZR4 134 aa21.25■□□□□ 0.99
CCDC88B-203ENST00000359902 OVOS1Q6IE37 1185 aa21.25■□□□□ 0.99
CCDC88B-203ENST00000359902 OTOP3Q7RTS5 596 aa21.25■□□□□ 0.99
CCDC88B-203ENST00000359902 PLD6Q8N2A8 252 aaKnown RBP21.25■□□□□ 0.99
CCDC88B-203ENST00000359902 TSGA13Q96PP4 275 aa21.25■□□□□ 0.99
CCDC88B-203ENST00000359902 SORT1Q99523 831 aa21.25■□□□□ 0.99
CCDC88B-203ENST00000359902 ADAM2Q99965 735 aa21.25■□□□□ 0.99
CCDC88B-203ENST00000359902 SOX13Q9UN79 622 aa21.25■□□□□ 0.99
CCDC88B-203ENST00000359902 INPP5FQ9Y2H2 1132 aa21.25■□□□□ 0.99
CCDC88B-203ENST00000359902 RPLP2P05387 115 aaKnown RBP21.24■□□□□ 0.99
CCDC88B-203ENST00000359902 ITGB1P05556 798 aa21.24■□□□□ 0.99
CCDC88B-203ENST00000359902 ZNF33AQ06730 810 aa21.24■□□□□ 0.99
CCDC88B-203ENST00000359902 GRIK3Q13003 919 aa21.24■□□□□ 0.99
CCDC88B-203ENST00000359902 TUBB3Q13509 450 aa21.24■□□□□ 0.99
CCDC88B-203ENST00000359902 PRPSAP1Q14558 356 aa21.24■□□□□ 0.99
CCDC88B-203ENST00000359902 LPIN1Q14693 890 aa21.24■□□□□ 0.99
CCDC88B-203ENST00000359902 RGMBQ6NW40 437 aa21.24■□□□□ 0.99
CCDC88B-203ENST00000359902 ARHGAP36Q6ZRI8 547 aa21.24■□□□□ 0.99
CCDC88B-203ENST00000359902 MMADHCQ9H3L0 296 aaPredicted RBP21.24■□□□□ 0.99
CCDC88B-203ENST00000359902 DCLRE1BQ9H816 532 aa21.24■□□□□ 0.99
CCDC88B-203ENST00000359902 C20orf96Q9NUD7 363 aaPredicted RBP21.24■□□□□ 0.99
CCDC88B-203ENST00000359902 CACNG3O60359 315 aa21.24■□□□□ 0.99
CCDC88B-203ENST00000359902 CPA3P15088 417 aa21.24■□□□□ 0.99
CCDC88B-203ENST00000359902 ARRB2P32121 409 aa21.24■□□□□ 0.99
CCDC88B-203ENST00000359902 CYP2C18P33260 490 aa21.24■□□□□ 0.99
CCDC88B-203ENST00000359902 INHBEP58166 350 aa21.24■□□□□ 0.99
CCDC88B-203ENST00000359902 NKX3-2P78367 333 aa21.24■□□□□ 0.99
CCDC88B-203ENST00000359902 COG7P83436 770 aa21.24■□□□□ 0.99
CCDC88B-203ENST00000359902 CCDC153Q494R4 210 aa21.24■□□□□ 0.99
CCDC88B-203ENST00000359902 KCNMB4Q86W47 210 aa21.24■□□□□ 0.99
CCDC88B-203ENST00000359902 KLHDC8BQ8IXV7 354 aa21.24■□□□□ 0.99
CCDC88B-203ENST00000359902 FBXO27Q8NI29 283 aa21.24■□□□□ 0.99
CCDC88B-203ENST00000359902 RSRC1Q96IZ7 334 aaKnown RBP21.24■□□□□ 0.99
CCDC88B-203ENST00000359902 ZNF570Q96NI8 536 aa21.24■□□□□ 0.99
CCDC88B-203ENST00000359902 MCMBPQ9BTE3 642 aa21.24■□□□□ 0.99
CCDC88B-203ENST00000359902 TRIM62Q9BVG3 475 aa21.24■□□□□ 0.99
CCDC88B-203ENST00000359902 GABRQQ9UN88 632 aa21.24■□□□□ 0.99
CCDC88B-203ENST00000359902 F8W810 466 aa21.23■□□□□ 0.99
CCDC88B-203ENST00000359902 H0Y3Z8 333 aa21.23■□□□□ 0.99
CCDC88B-203ENST00000359902 IRAK2O43187 625 aa21.23■□□□□ 0.99
CCDC88B-203ENST00000359902 ADAMTS4O75173 837 aa21.23■□□□□ 0.99
CCDC88B-203ENST00000359902 ASGR1P07306 291 aa21.23■□□□□ 0.99
CCDC88B-203ENST00000359902 RALBP11234 206 aa21.23■□□□□ 0.99
CCDC88B-203ENST00000359902 NMBRP28336 390 aa21.23■□□□□ 0.99
CCDC88B-203ENST00000359902 ELF1P32519 619 aa21.23■□□□□ 0.99
CCDC88B-203ENST00000359902 ABCG1P45844 678 aa21.23■□□□□ 0.99
CCDC88B-203ENST00000359902 PGFP49763 221 aa21.23■□□□□ 0.99
CCDC88B-203ENST00000359902 CDH17Q12864 832 aa21.23■□□□□ 0.99
CCDC88B-203ENST00000359902 NAPEPLDQ6IQ20 393 aa21.23■□□□□ 0.99
CCDC88B-203ENST00000359902 TMPRSS6Q8IU80 811 aa21.23■□□□□ 0.99
CCDC88B-203ENST00000359902 OR6Y1Q8NGX8 325 aa21.23■□□□□ 0.99
CCDC88B-203ENST00000359902 USP33Q8TEY7 942 aa21.23■□□□□ 0.99
CCDC88B-203ENST00000359902 N4BP2L2Q92802 583 aaPredicted RBP21.23■□□□□ 0.99
CCDC88B-203ENST00000359902 HAPLN3Q96S86 360 aa21.23■□□□□ 0.99
CCDC88B-203ENST00000359902 ARHGAP39Q9C0H5 1083 aa21.23■□□□□ 0.99
CCDC88B-203ENST00000359902 CAB39LQ9H9S4 337 aa21.23■□□□□ 0.99
CCDC88B-203ENST00000359902 TAGLN3Q9UI15 199 aa21.23■□□□□ 0.99
CCDC88B-203ENST00000359902 DFFAO00273 331 aa21.23■□□□□ 0.99
CCDC88B-203ENST00000359902 LMNAP02545 664 aaKnown RBP21.23■□□□□ 0.99
CCDC88B-203ENST00000359902 CCNCP24863 283 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms