RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 LRRC74BQ6ZQY2 392 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 ZDHHC17Q8IUH5 632 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 ZNF276Q8N554 614 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 ZNF671Q8TAW3 534 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 ZNF606Q8WXB4 792 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 GMCL1Q96IK5 515 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 ZDHHC15Q96MV8 337 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 OPTCQ9UBM4 332 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 PDHXO00330 501 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 NKRFO15226 690 aaKnown RBP eCLIP18.68■□□□□ 0.58
SHANK1-202ENST00000359082 GHRP10912 638 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 XRCC4Q13426 336 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 PPM1LQ5SGD2 360 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 NBPF12Q5TAG4 269 aaPredicted RBP18.68■□□□□ 0.58
SHANK1-202ENST00000359082 CSGALNACT1Q8TDX6 532 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 TRHDEQ9UKU6 1024 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 DNPEPQ9ULA0 475 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 SHOC2Q9UQ13 582 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 BCLAF3A2AJT9 711 aaKnown RBP18.67■□□□□ 0.58
SHANK1-202ENST00000359082 NFKB1P19838 968 aa18.67■□□□□ 0.58
SHANK1-202ENST00000359082 S100A3P33764 101 aa18.67■□□□□ 0.58
SHANK1-202ENST00000359082 PKNOX1P55347 436 aa18.67■□□□□ 0.58
SHANK1-202ENST00000359082 GNA13Q14344 377 aa18.67■□□□□ 0.58
SHANK1-202ENST00000359082 RTFDC1Q9BY42 306 aaPredicted RBP18.67■□□□□ 0.58
SHANK1-202ENST00000359082 PRKD2Q9BZL6 878 aa18.67■□□□□ 0.58
SHANK1-202ENST00000359082 POLR1BQ9H9Y6 1135 aa18.67■□□□□ 0.58
SHANK1-202ENST00000359082 VAV3Q9UKW4 847 aa18.67■□□□□ 0.58
SHANK1-202ENST00000359082 NEK3P51956 506 aa18.67■□□□□ 0.58
SHANK1-202ENST00000359082 RAD21L1Q9H4I0 556 aa18.67■□□□□ 0.58
SHANK1-202ENST00000359082 GALNT8Q9NY28 637 aa18.67■□□□□ 0.58
SHANK1-202ENST00000359082 UBA2Q9UBT2 640 aaPredicted RBP18.67■□□□□ 0.58
SHANK1-202ENST00000359082 FRMPD1Q5SYB0 1578 aa18.67■□□□□ 0.58
SHANK1-202ENST00000359082 ZSCAN5CA6NGD5 496 aaPredicted RBP18.67■□□□□ 0.58
SHANK1-202ENST00000359082 FAM153BP0C7A2 387 aa18.67■□□□□ 0.58
SHANK1-202ENST00000359082 MAPKAPK2P49137 400 aa18.67■□□□□ 0.58
SHANK1-202ENST00000359082 RAB27AP51159 221 aa18.67■□□□□ 0.58
SHANK1-202ENST00000359082 PRKAA2P54646 552 aa18.67■□□□□ 0.58
SHANK1-202ENST00000359082 ZNF268Q14587 947 aaPredicted RBP18.67■□□□□ 0.58
SHANK1-202ENST00000359082 FAM153CQ494X1 144 aa18.67■□□□□ 0.58
SHANK1-202ENST00000359082 C9orf131Q5VYM1 1079 aa18.67■□□□□ 0.58
SHANK1-202ENST00000359082 FBXO30Q8TB52 745 aa18.67■□□□□ 0.58
SHANK1-202ENST00000359082 DDTLA6NHG4 134 aaPredicted RBP18.67■□□□□ 0.58
SHANK1-202ENST00000359082 DCXO43602 365 aa18.67■□□□□ 0.58
SHANK1-202ENST00000359082 KIAA0895Q8NCT3 520 aa18.67■□□□□ 0.58
SHANK1-202ENST00000359082 VPS45Q9NRW7 570 aa18.67■□□□□ 0.58
SHANK1-202ENST00000359082 LRRC4BQ9NT99 713 aa18.67■□□□□ 0.58
SHANK1-202ENST00000359082 NUDT5Q9UKK9 219 aa18.67■□□□□ 0.58
SHANK1-202ENST00000359082 TMX2Q9Y320 296 aa18.67■□□□□ 0.58
SHANK1-202ENST00000359082 DIP2AQ14689 1571 aa18.67■□□□□ 0.58
SHANK1-202ENST00000359082 POLR2EP19388 210 aaKnown RBP18.67■□□□□ 0.58
SHANK1-202ENST00000359082 BDNFP23560 247 aa18.67■□□□□ 0.58
SHANK1-202ENST00000359082 POLD2P49005 469 aa18.67■□□□□ 0.58
SHANK1-202ENST00000359082 IFI35P80217 286 aaPredicted RBP18.67■□□□□ 0.58
SHANK1-202ENST00000359082 TAF5Q15542 800 aa18.67■□□□□ 0.58
SHANK1-202ENST00000359082 ZNF75CPQ92670 426 aaPredicted RBP18.67■□□□□ 0.58
SHANK1-202ENST00000359082 NARS2Q96I59 477 aaKnown RBP18.67■□□□□ 0.58
SHANK1-202ENST00000359082 ARL15Q9NXU5 204 aa18.67■□□□□ 0.58
SHANK1-202ENST00000359082 MKL2Q9ULH7 1088 aa18.67■□□□□ 0.58
SHANK1-202ENST00000359082 KCNK1O00180 336 aa18.66■□□□□ 0.58
SHANK1-202ENST00000359082 USP12O75317 370 aa18.66■□□□□ 0.58
SHANK1-202ENST00000359082 RTN3O95197 1032 aaPredicted RBP18.66■□□□□ 0.58
SHANK1-202ENST00000359082 TNFAIP8O95379 198 aa18.66■□□□□ 0.58
SHANK1-202ENST00000359082 MMP13P45452 471 aa18.66■□□□□ 0.58
SHANK1-202ENST00000359082 C16orf46Q6P387 395 aa18.66■□□□□ 0.58
SHANK1-202ENST00000359082 DNERQ8NFT8 737 aa18.66■□□□□ 0.58
SHANK1-202ENST00000359082 DNAJC1Q96KC8 554 aaKnown RBP18.66■□□□□ 0.58
SHANK1-202ENST00000359082 RNF19AQ9NV58 838 aa18.66■□□□□ 0.58
SHANK1-202ENST00000359082 KPNA6O60684 536 aa18.66■□□□□ 0.58
SHANK1-202ENST00000359082 PRKAG1P54619 331 aa18.66■□□□□ 0.58
SHANK1-202ENST00000359082 PPIL2Q13356 520 aa18.66■□□□□ 0.58
SHANK1-202ENST00000359082 TRAPPC5Q8IUR0 188 aa18.66■□□□□ 0.58
SHANK1-202ENST00000359082 IQSEC2Q5JU85 1478 aa18.66■□□□□ 0.58
SHANK1-202ENST00000359082 VIL1P09327 827 aaKnown RBP18.66■□□□□ 0.58
SHANK1-202ENST00000359082 SLC6A3Q01959 620 aa18.66■□□□□ 0.58
SHANK1-202ENST00000359082 CYP2A13Q16696 494 aa18.66■□□□□ 0.58
SHANK1-202ENST00000359082 FIGNQ5HY92 759 aa18.66■□□□□ 0.58
SHANK1-202ENST00000359082 NPNTQ6UXI9 565 aa18.66■□□□□ 0.58
SHANK1-202ENST00000359082 C9orf16Q9BUW7 83 aa18.66■□□□□ 0.58
SHANK1-202ENST00000359082 TRIT1Q9H3H1 467 aaKnown RBP18.66■□□□□ 0.58
SHANK1-202ENST00000359082 FBXL21Q9UKT6 434 aa18.66■□□□□ 0.58
SHANK1-202ENST00000359082 FAM50BQ9Y247 325 aa18.66■□□□□ 0.58
SHANK1-202ENST00000359082 CBX6O95503 412 aa18.66■□□□□ 0.58
SHANK1-202ENST00000359082 RARAP10276 462 aa18.66■□□□□ 0.58
SHANK1-202ENST00000359082 LRPAP1P30533 357 aa18.66■□□□□ 0.58
SHANK1-202ENST00000359082 BTG3Q14201 252 aaPredicted RBP18.66■□□□□ 0.58
SHANK1-202ENST00000359082 ARMC12Q5T9G4 340 aa18.66■□□□□ 0.58
SHANK1-202ENST00000359082 SLC27A1Q6PCB7 646 aa18.66■□□□□ 0.58
SHANK1-202ENST00000359082 TMC3Q7Z5M5 1100 aa18.66■□□□□ 0.58
SHANK1-202ENST00000359082 CENPIQ92674 756 aaPredicted RBP18.66■□□□□ 0.58
SHANK1-202ENST00000359082 COL26A1Q96A83 441 aa18.66■□□□□ 0.58
SHANK1-202ENST00000359082 L2HGDHQ9H9P8 463 aa18.66■□□□□ 0.58
SHANK1-202ENST00000359082 TOR4AQ9NXH8 423 aa18.66■□□□□ 0.58
SHANK1-202ENST00000359082 KPNA3O00505 521 aaPredicted RBP18.66■□□□□ 0.58
SHANK1-202ENST00000359082 NRF1Q16656 503 aa18.66■□□□□ 0.58
SHANK1-202ENST00000359082 SAPCD2Q86UD0 394 aa18.66■□□□□ 0.58
SHANK1-202ENST00000359082 GBA2Q9HCG7 927 aaPredicted RBP18.66■□□□□ 0.58
SHANK1-202ENST00000359082 TMEM39AQ9NV64 488 aa18.66■□□□□ 0.58
SHANK1-202ENST00000359082 LRRC14BA6NHZ5 514 aa18.65■□□□□ 0.58
SHANK1-202ENST00000359082 HACD1B0YJ81 288 aa18.65■□□□□ 0.58
SHANK1-202ENST00000359082 PDE9AO76083 593 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms