RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 IGSF21Q96ID5 467 aa12.95□□□□□ -0.34
GGPS1-202ENST00000358966 XPO6Q96QU8 1125 aaKnown RBP12.95□□□□□ -0.34
GGPS1-202ENST00000358966 TMEM109Q9BVC6 243 aa12.95□□□□□ -0.34
GGPS1-202ENST00000358966 UGT1A7Q9HAW7 530 aa12.95□□□□□ -0.34
GGPS1-202ENST00000358966 UGT1A10Q9HAW8 530 aa12.95□□□□□ -0.34
GGPS1-202ENST00000358966 UGT1A8Q9HAW9 530 aa12.95□□□□□ -0.34
GGPS1-202ENST00000358966 KCNK9Q9NPC2 374 aa12.95□□□□□ -0.34
GGPS1-202ENST00000358966 KLHL8Q9P2G9 620 aaPredicted RBP12.95□□□□□ -0.34
GGPS1-202ENST00000358966 SCML2Q9UQR0 700 aa12.95□□□□□ -0.34
GGPS1-202ENST00000358966 TEX264Q9Y6I9 313 aa12.95□□□□□ -0.34
GGPS1-202ENST00000358966 TRANK1O15050 2925 aa12.94□□□□□ -0.34
GGPS1-202ENST00000358966 TMEM120BA0PK00 339 aa12.94□□□□□ -0.34
GGPS1-202ENST00000358966 CCDC78A2IDD5 438 aa12.94□□□□□ -0.34
GGPS1-202ENST00000358966 CFAP69A5D8W1 941 aa12.94□□□□□ -0.34
GGPS1-202ENST00000358966 AGTP01019 485 aa12.94□□□□□ -0.34
GGPS1-202ENST00000358966 PTPN3P26045 913 aa12.94□□□□□ -0.34
GGPS1-202ENST00000358966 CA8P35219 290 aa12.94□□□□□ -0.34
GGPS1-202ENST00000358966 KBTBD12Q3ZCT8 623 aa12.94□□□□□ -0.34
GGPS1-202ENST00000358966 MFSD5Q6N075 450 aa12.94□□□□□ -0.34
GGPS1-202ENST00000358966 TAX1BP1Q86VP1 789 aa12.94□□□□□ -0.34
GGPS1-202ENST00000358966 MON1AQ86VX9 555 aa12.94□□□□□ -0.34
GGPS1-202ENST00000358966 GDAP1Q8TB36 358 aa12.94□□□□□ -0.34
GGPS1-202ENST00000358966 C8orf48Q96LL4 319 aa12.94□□□□□ -0.34
GGPS1-202ENST00000358966 EURLQ9NYK6 297 aa12.94□□□□□ -0.34
GGPS1-202ENST00000358966 ZMYND8Q9ULU4 1186 aaPredicted RBP12.94□□□□□ -0.34
GGPS1-202ENST00000358966 COL4A4P53420 1690 aaPredicted RBP12.94□□□□□ -0.34
GGPS1-202ENST00000358966 C5orf60A6NFR6 353 aa12.94□□□□□ -0.34
GGPS1-202ENST00000358966 OR6C75A6NL08 312 aa12.94□□□□□ -0.34
GGPS1-202ENST00000358966 CXorf49A8MYA2 514 aaPredicted RBP12.94□□□□□ -0.34
GGPS1-202ENST00000358966 RASA4BC9J798 803 aa12.94□□□□□ -0.34
GGPS1-202ENST00000358966 ZBTB24O43167 697 aaPredicted RBP12.94□□□□□ -0.34
GGPS1-202ENST00000358966 RASA4O43374 803 aa12.94□□□□□ -0.34
GGPS1-202ENST00000358966 CNTN5O94779 1100 aa12.94□□□□□ -0.34
GGPS1-202ENST00000358966 MMP13P45452 471 aa12.94□□□□□ -0.34
GGPS1-202ENST00000358966 DYNC1I2Q13409 638 aaKnown RBP12.94□□□□□ -0.34
GGPS1-202ENST00000358966 RIPK1Q13546 671 aa12.94□□□□□ -0.34
GGPS1-202ENST00000358966 PDK1Q15118 436 aa12.94□□□□□ -0.34
GGPS1-202ENST00000358966 PABPC1LQ4VXU2 614 aaKnown RBP12.94□□□□□ -0.34
GGPS1-202ENST00000358966 TRIM68Q6AZZ1 485 aa12.94□□□□□ -0.34
GGPS1-202ENST00000358966 ATP11CQ8NB49 1132 aa12.94□□□□□ -0.34
GGPS1-202ENST00000358966 TOX2Q96NM4 488 aa12.94□□□□□ -0.34
GGPS1-202ENST00000358966 PRMT1Q99873 361 aaKnown RBP12.94□□□□□ -0.34
GGPS1-202ENST00000358966 CLSTN3Q9BQT9 956 aa12.94□□□□□ -0.34
GGPS1-202ENST00000358966 ARHGEF38Q9NXL2 777 aa12.94□□□□□ -0.34
GGPS1-202ENST00000358966 NYNRINQ9P2P1 1898 aaKnown RBP12.93□□□□□ -0.34
GGPS1-202ENST00000358966 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.93□□□□□ -0.34
GGPS1-202ENST00000358966 HOXA2O43364 376 aa12.93□□□□□ -0.34
GGPS1-202ENST00000358966 CDH16O75309 829 aa12.93□□□□□ -0.34
GGPS1-202ENST00000358966 CD68P34810 354 aaPredicted RBP12.93□□□□□ -0.34
GGPS1-202ENST00000358966 KCNQ1P51787 676 aa12.93□□□□□ -0.34
GGPS1-202ENST00000358966 STAT4Q14765 748 aa12.93□□□□□ -0.34
GGPS1-202ENST00000358966 QPCTQ16769 361 aa12.93□□□□□ -0.34
GGPS1-202ENST00000358966 ALFQ53S48 1182 aa12.93□□□□□ -0.34
GGPS1-202ENST00000358966 CASC4Q6P4E1 433 aa12.93□□□□□ -0.34
GGPS1-202ENST00000358966 CNKSR3Q6P9H4 555 aa12.93□□□□□ -0.34
GGPS1-202ENST00000358966 SLC35B4Q969S0 331 aa12.93□□□□□ -0.34
GGPS1-202ENST00000358966 PAFAH2Q99487 392 aa12.93□□□□□ -0.34
GGPS1-202ENST00000358966 E9PAM4 449 aa12.93□□□□□ -0.34
GGPS1-202ENST00000358966 TRDMT1O14717 391 aaKnown RBP12.93□□□□□ -0.34
GGPS1-202ENST00000358966 JCHAINP01591 159 aa12.93□□□□□ -0.34
GGPS1-202ENST00000358966 HAPLN1P10915 354 aaPredicted RBP12.93□□□□□ -0.34
GGPS1-202ENST00000358966 BRAFP15056 766 aa12.93□□□□□ -0.34
GGPS1-202ENST00000358966 KRT15P19012 456 aa12.93□□□□□ -0.34
GGPS1-202ENST00000358966 GARSP41250 739 aaKnown RBP12.93□□□□□ -0.34
GGPS1-202ENST00000358966 BTG3Q14201 252 aaPredicted RBP12.93□□□□□ -0.34
GGPS1-202ENST00000358966 ANKS3Q6ZW76 656 aa12.93□□□□□ -0.34
GGPS1-202ENST00000358966 OTOP3Q7RTS5 596 aa12.93□□□□□ -0.34
GGPS1-202ENST00000358966 KDELC2Q7Z4H8 507 aa12.93□□□□□ -0.34
GGPS1-202ENST00000358966 MAML1Q92585 1016 aa12.93□□□□□ -0.34
GGPS1-202ENST00000358966 TOP1MTQ969P6 601 aa12.93□□□□□ -0.34
GGPS1-202ENST00000358966 ROPN1BQ9BZX4 212 aaPredicted RBP12.93□□□□□ -0.34
GGPS1-202ENST00000358966 ROPN1Q9HAT0 212 aaPredicted RBP12.93□□□□□ -0.34
GGPS1-202ENST00000358966 SMYD2Q9NRG4 433 aa12.93□□□□□ -0.34
GGPS1-202ENST00000358966 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.93□□□□□ -0.34
GGPS1-202ENST00000358966 RRN3Q9NYV6 651 aa12.93□□□□□ -0.34
GGPS1-202ENST00000358966 ZC3H7BQ9UGR2 993 aaKnown RBP12.93□□□□□ -0.34
GGPS1-202ENST00000358966 TMEM98Q9Y2Y6 226 aa12.93□□□□□ -0.34
GGPS1-202ENST00000358966 PLXNA3P51805 1871 aa12.93□□□□□ -0.34
GGPS1-202ENST00000358966 SLC12A8A0AV02 714 aa12.92□□□□□ -0.34
GGPS1-202ENST00000358966 E2F6O75461 281 aa12.92□□□□□ -0.34
GGPS1-202ENST00000358966 GJB5O95377 273 aa12.92□□□□□ -0.34
GGPS1-202ENST00000358966 ABHD2P08910 425 aa12.92□□□□□ -0.34
GGPS1-202ENST00000358966 RAG1P15918 1043 aa12.92□□□□□ -0.34
GGPS1-202ENST00000358966 TBX4P57082 545 aa12.92□□□□□ -0.34
GGPS1-202ENST00000358966 WDR5P61964 334 aaKnown RBP12.92□□□□□ -0.34
GGPS1-202ENST00000358966 USP41Q3LFD5 358 aa12.92□□□□□ -0.34
GGPS1-202ENST00000358966 RAP1GAP2Q684P5 730 aa12.92□□□□□ -0.34
GGPS1-202ENST00000358966 ARHGAP12Q8IWW6 846 aa12.92□□□□□ -0.34
GGPS1-202ENST00000358966 KCNV2Q8TDN2 545 aa12.92□□□□□ -0.34
GGPS1-202ENST00000358966 SEC16BQ96JE7 1060 aa12.92□□□□□ -0.34
GGPS1-202ENST00000358966 TTC25Q96NG3 672 aa12.92□□□□□ -0.34
GGPS1-202ENST00000358966 FOXP3Q9BZS1 431 aa12.92□□□□□ -0.34
GGPS1-202ENST00000358966 FBXO44Q9H4M3 255 aa12.92□□□□□ -0.34
GGPS1-202ENST00000358966 C11orf49Q9H6J7 331 aa12.92□□□□□ -0.34
GGPS1-202ENST00000358966 MARCH2Q9P0N8 246 aa12.92□□□□□ -0.34
GGPS1-202ENST00000358966 TTC24A2A3L6 582 aaPredicted RBP12.92□□□□□ -0.34
GGPS1-202ENST00000358966 ZBBXA8MT70 800 aa12.92□□□□□ -0.34
GGPS1-202ENST00000358966 KCNU1A8MYU2 1149 aa12.92□□□□□ -0.34
GGPS1-202ENST00000358966 TLR5O60602 858 aa12.92□□□□□ -0.34
GGPS1-202ENST00000358966 NFKB1P19838 968 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms