RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 TLR1Q15399 786 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 CCDC153Q494R4 210 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 GRTP1Q5TC63 336 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 TRNP1Q6NT89 227 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 RPS27LQ71UM5 84 aaKnown RBP6.7□□□□□ -1.34
CSDE1-203ENST00000358528 TTC30AQ86WT1 665 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 CATSPER1Q8NEC5 780 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 VPS39Q96JC1 886 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 CNDP1Q96KN2 507 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 ZNF670Q9BS34 389 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 PLEKHA5Q9HAU0 1116 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 NDUFA13Q9P0J0 144 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 SMIM31A0A1B0GVY4 71 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 C19orf81C9J6K1 198 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 H3BSA7 217 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 HDAC3O15379 428 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 SPATA31D3P0C874 917 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 MAP3K7CLP57077 242 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 PHEXP78562 749 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 TTLL4Q14679 1199 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 SLC10A6Q3KNW5 377 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 TEX44Q53QW1 395 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 MTX3Q5HYI7 312 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 TTC33Q6PID6 262 aaPredicted RBP6.7□□□□□ -1.34
CSDE1-203ENST00000358528 SPATA31D4Q6ZUB0 917 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 EXOC8Q8IYI6 725 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 UBR7Q8N806 425 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 MAPK15Q8TD08 544 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 ACTRT2Q8TDY3 377 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 ZFAND2BQ8WV99 257 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 ERLEC1Q96DZ1 483 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 PCYT2Q99447 389 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 CPNE1Q99829 537 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 RNF39Q9H2S5 420 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 GOLGA2P5Q9HBQ8 144 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 XPR1Q9UBH6 696 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 CNTN6Q9UQ52 1028 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 PIN4Q9Y237 131 aaKnown RBP6.7□□□□□ -1.34
CSDE1-203ENST00000358528 TDRKHQ9Y2W6 561 aaKnown RBP6.7□□□□□ -1.34
CSDE1-203ENST00000358528 ACOT9Q9Y305 439 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 SNX10Q9Y5X0 201 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 SBF2Q86WG5 1849 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 KIF13BQ9NQT8 1826 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 NEMP2A6NFY4 417 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 KCNU1A8MYU2 1149 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 DNAJA2O60884 412 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 SUPT7LO94864 414 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 PIGRP01833 764 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 NFKB1P19838 968 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 CDH15P55291 814 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 IL1RL1Q01638 556 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 SOWAHAQ2M3V2 549 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 FUT11Q495W5 492 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 HSF5Q4G112 596 aaPredicted RBP6.7□□□□□ -1.34
CSDE1-203ENST00000358528 C16orf87Q6PH81 154 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 KLHDC10Q6PID8 442 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 C4orf22Q6V702 233 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 RNF168Q8IYW5 571 aaPredicted RBP6.7□□□□□ -1.34
CSDE1-203ENST00000358528 CHST13Q8NET6 341 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 APPL2Q8NEU8 664 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 TSPAN14Q8NG11 270 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 ZNF778Q96MU6 729 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 ERAP1Q9NZ08 941 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 TUBGCP4Q9UGJ1 667 aa6.7□□□□□ -1.34
CSDE1-203ENST00000358528 ADGRA2Q96PE1 1338 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 TCRBV5S1A1TA0A578 114 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 TIMM44O43615 452 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 STRNO43815 780 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 ARIH2O95376 493 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 HSPA8P11142 646 aaKnown RBP6.69□□□□□ -1.34
CSDE1-203ENST00000358528 HDCP19113 662 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 TFEBP19484 476 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 L1CAMP32004 1257 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 PITX1P78337 314 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-203ENST00000358528 GRM3Q14832 879 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 CCDC142Q17RM4 750 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 C11orf91Q3C1V1 193 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 TREML2Q5T2D2 321 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 FKBP1CQ5VVH2 108 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 SLC9A4Q6AI14 798 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 ITPRIPL1Q6GPH6 555 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 LCLAT1Q6UWP7 414 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 CATSPERGQ6ZRH7 1159 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 ARMCX2Q7L311 632 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 SPNS2Q8IVW8 549 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 ZNF567Q8N184 647 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 REPS2Q8NFH8 660 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 APBB2Q92870 758 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 OSMRQ99650 979 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 PKP2Q99959 881 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 NAT9Q9BTE0 207 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 NIFKQ9BYG3 293 aaKnown RBP6.69□□□□□ -1.34
CSDE1-203ENST00000358528 SPATC1LQ9H0A9 340 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 MRPL46Q9H2W6 279 aaKnown RBP6.69□□□□□ -1.34
CSDE1-203ENST00000358528 PIM2Q9P1W9 311 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 WARS2Q9UGM6 360 aaKnown RBP6.69□□□□□ -1.34
CSDE1-203ENST00000358528 ATAD5Q96QE3 1844 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 EP400Q96L91 3159 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 FAM149AA5PLN7 773 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 ZBBXA8MT70 800 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms