RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 ANKRD49Q8WVL7 239 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 EPB41L4BQ9H329 900 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 PFDN2Q9UHV9 154 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 GNG14A0A1W2PPG7 69 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 CLDN25C9JDP6 229 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 LGR5O75473 907 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 GARTP22102 1010 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 GMFBP60983 142 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 ABATP80404 500 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 CDC42EP1Q00587 391 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 CYP24A1Q07973 514 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 CDH17Q12864 832 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 ATF7IP2Q5U623 682 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 TBCBQ99426 244 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 DUSP9Q99956 384 aaKnown RBP8.91□□□□□ -0.98
COL6A6-201ENST00000358511 GPATCH1Q9BRR8 931 aaKnown RBP8.91□□□□□ -0.98
COL6A6-201ENST00000358511 MUC13Q9H3R2 512 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 SMARCAD1Q9H4L7 1026 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 PNPLA8Q9NP80 782 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 RPS6KA6Q9UK32 745 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 INVSQ9Y283 1065 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 PRLP01236 227 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 SLC2A3P11169 496 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 NPY2RP49146 381 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 IST1P53990 364 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 HSF2Q03933 536 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 PHKG1Q16816 387 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 CBWD1Q9BRT8 395 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 MTMR12Q9C0I1 747 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 ELOVL6Q9H5J4 265 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 ERGIC3Q9Y282 383 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 A0A1W2PRG6 482 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 STARP49675 285 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 RAB27AP51159 221 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 LSM3P62310 102 aaKnown RBP8.91□□□□□ -0.98
COL6A6-201ENST00000358511 CSNK2BP67870 215 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 ALLCQ8N6M5 410 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 URGCPQ8TCY9 931 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 PCDHA11Q9Y5I1 949 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 TGDSO95455 350 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 C5orf22Q49AR2 442 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 ECHDC2Q86YB7 292 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 KRT78Q8N1N4 520 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 DEPDC4Q8N2C3 294 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 FAM84BQ96KN1 310 aaPredicted RBP8.91□□□□□ -0.98
COL6A6-201ENST00000358511 KIAA1257Q9ULG3 409 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 TMED5Q9Y3A6 229 aa8.91□□□□□ -0.98
COL6A6-201ENST00000358511 PTPRMP28827 1452 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 UBE2QL1A1L167 161 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 ZMPSTE24O75844 475 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 GJB6O95452 261 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 GH1P01241 217 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 CACNB3P54284 484 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 IL31Q6EBC2 164 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 CAMKK2Q96RR4 588 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 SH3BP4Q9P0V3 963 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 ADAM28Q9UKQ2 775 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 GMPPBQ9Y5P6 360 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 A0A0B4J269 797 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 PAICSP22234 425 aaKnown RBP8.9□□□□□ -0.98
COL6A6-201ENST00000358511 ERICH5Q6P6B1 374 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 POMKQ9H5K3 350 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 DOLKQ9UPQ8 538 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 PCDHGA10Q9Y5H3 936 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 GLP2RO95838 553 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 DBTP11182 482 aaKnown RBP8.9□□□□□ -0.98
COL6A6-201ENST00000358511 RCVRNP35243 200 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 AQP4P55087 323 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 GCNT1Q02742 428 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 ZIK1Q3SY52 487 aaPredicted RBP8.9□□□□□ -0.98
COL6A6-201ENST00000358511 TMEM139Q8IV31 216 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 SYNE4Q8N205 404 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 RBM15BQ8NDT2 890 aaKnown RBP8.9□□□□□ -0.98
COL6A6-201ENST00000358511 DCPSQ96C86 337 aaKnown RBP8.9□□□□□ -0.98
COL6A6-201ENST00000358511 MBOAT7Q96N66 472 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 INPP4AQ96PE3 977 aaPredicted RBP8.9□□□□□ -0.98
COL6A6-201ENST00000358511 PRKD2Q9BZL6 878 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 BCL2L14Q9BZR8 327 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 NOL11Q9H8H0 719 aaKnown RBP8.9□□□□□ -0.98
COL6A6-201ENST00000358511 ERI2A8K979 691 aaKnown RBP8.9□□□□□ -0.98
COL6A6-201ENST00000358511 UBE2Q2LH0YL09 131 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 MSH4O15457 936 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 PIGNO95427 931 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 PABPC1P11940 636 aaKnown RBP8.9□□□□□ -0.98
COL6A6-201ENST00000358511 BMP6P22004 513 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 SLC5A3P53794 718 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 HIST2H2ACQ16777 129 aaPredicted RBP8.9□□□□□ -0.98
COL6A6-201ENST00000358511 SV2CQ496J9 727 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 TNFAIP8L3Q5GJ75 292 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 HIST2H2AA3Q6FI13 130 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 FBXO39Q8N4B4 442 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 COLGALT1Q8NBJ5 622 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 CLN6Q9NWW5 311 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 KIF13AQ9H1H9 1805 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 TSPAN4O14817 238 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 PCSK1P29120 753 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 LTKP29376 864 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 HIPK1Q86Z02 1210 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 CBWD2Q8IUF1 395 aa8.9□□□□□ -0.98
COL6A6-201ENST00000358511 UBA3Q8TBC4 463 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms