RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 ATP6V1HQ9UI12 483 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 XPO1O14980 1071 aaKnown RBP11.46□□□□□ -0.57
FN1-204ENST00000356005 FAXCQ5TGI0 409 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 LUZP2Q86TE4 346 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 IFNEQ86WN2 208 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 TEX9Q8N6V9 391 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 SPATA20Q8TB22 786 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 ACTRT1Q8TDG2 376 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 MAML3Q96JK9 1138 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 ATAD3AQ9NVI7 634 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 INSL6Q9Y581 213 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 COPG1Q9Y678 874 aaKnown RBP11.46□□□□□ -0.57
FN1-204ENST00000356005 PRLRP16471 622 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 CASP7P55210 303 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 COPZ1P61923 177 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 PLD3Q8IV08 490 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 SHOC2Q9UQ13 582 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 MRPS33Q9Y291 106 aaKnown RBP11.46□□□□□ -0.57
FN1-204ENST00000356005 RRP15Q9Y3B9 282 aaKnown RBP11.46□□□□□ -0.57
FN1-204ENST00000356005 LAMB4A4D0S4 1761 aa11.46□□□□□ -0.57
FN1-204ENST00000356005 WLSQ5T9L3 541 aa11.46□□□□□ -0.58
FN1-204ENST00000356005 SAMD11Q96NU1 681 aa11.46□□□□□ -0.58
FN1-204ENST00000356005 OPTCQ9UBM4 332 aa11.46□□□□□ -0.58
FN1-204ENST00000356005 FAM220BPB1ANY3 271 aa11.46□□□□□ -0.58
FN1-204ENST00000356005 CCNT2O60583 730 aaKnown RBP11.46□□□□□ -0.58
FN1-204ENST00000356005 SLC35G4P0C7Q5 338 aa11.46□□□□□ -0.58
FN1-204ENST00000356005 BLKP51451 505 aa11.46□□□□□ -0.58
FN1-204ENST00000356005 NLRP14Q86W24 1093 aa11.46□□□□□ -0.58
FN1-204ENST00000356005 KRT73Q86Y46 540 aa11.46□□□□□ -0.58
FN1-204ENST00000356005 ARNTL2Q8WYA1 636 aa11.46□□□□□ -0.58
FN1-204ENST00000356005 MYLPFQ96A32 169 aa11.46□□□□□ -0.58
FN1-204ENST00000356005 CNDP1Q96KN2 507 aa11.46□□□□□ -0.58
FN1-204ENST00000356005 TCF25Q9BQ70 676 aa11.46□□□□□ -0.58
FN1-204ENST00000356005 ZCCHC17Q9NP64 241 aaKnown RBP11.46□□□□□ -0.58
FN1-204ENST00000356005 SUCOQ9UBS9 1254 aaKnown RBP11.46□□□□□ -0.58
FN1-204ENST00000356005 SNX6Q9UNH7 406 aa11.46□□□□□ -0.58
FN1-204ENST00000356005 ERVW-1Q9UQF0 538 aa11.46□□□□□ -0.58
FN1-204ENST00000356005 ALBP02768 609 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 PGAM1P18669 254 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 SOX10P56693 466 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 GPR135Q8IZ08 494 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 CYGBQ8WWM9 190 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 ZC4H2Q9NQZ6 224 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 KLHL3Q9UH77 587 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 SLC24A2Q9UI40 661 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 A0A1B0GW55 424 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 SNUPNO95149 360 aaKnown RBP11.45□□□□□ -0.58
FN1-204ENST00000356005 DUX4L2P0CJ85 424 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 DUX4L3P0CJ86 424 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 DUX4L4P0CJ87 422 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 DUX4L5P0CJ88 424 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 DUX4L6P0CJ89 424 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 DUX4L7P0CJ90 424 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 PTPN2P17706 415 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 GLRA2P23416 452 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 DDX6P26196 483 aaKnown RBP eCLIP11.45□□□□□ -0.581e-11■■■■□ 22.1
FN1-204ENST00000356005 HTR7P34969 479 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 SKIV2L2P42285 1042 aaKnown RBP11.45□□□□□ -0.58
FN1-204ENST00000356005 KCNJ1P48048 391 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 CHRNB3Q05901 458 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 MAB21L3Q8N8X9 362 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 TMEM121Q9BTD3 319 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 CEP44Q9C0F1 390 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 DUX4Q9UBX2 424 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 GGT7Q9UJ14 662 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 POLR1DQ9Y2S0 133 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 COL3A1P02461 1466 aaPredicted RBP11.45□□□□□ -0.58
FN1-204ENST00000356005 RNF103O00237 685 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 GPD2P43304 727 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 PSMC6P62333 389 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 BNC1Q01954 994 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 TMEM132CQ8N3T6 1108 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 USE1Q9NZ43 259 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 FZD1Q9UP38 647 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 THRAP10827 490 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 DUSP4Q13115 394 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 C9orf57Q5W0N0 161 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 RIN3Q8TB24 985 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 SEMA6BQ9H3T3 888 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 CCDC134Q9H6E4 229 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 PHPT1Q9NRX4 125 aaPredicted RBP11.45□□□□□ -0.58
FN1-204ENST00000356005 ARL15Q9NXU5 204 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 A0A087X0T9 212 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 H3BNH8 94 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 TRDMT1O14717 391 aaKnown RBP11.45□□□□□ -0.58
FN1-204ENST00000356005 RAD51CO43502 376 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 KRT33AO76009 404 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 FAM228BP0C875 321 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 CYP3A5P20815 502 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 GTF2BQ00403 316 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 CACUL1Q86Y37 369 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 PEX5LQ8IYB4 626 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 C4orf33Q8N1A6 199 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 MARCOQ9UEW3 520 aaPredicted RBP11.45□□□□□ -0.58
FN1-204ENST00000356005 ZBTB39O15060 712 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 SLC25A12O75746 678 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 COPAP53621 1224 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 RHBDL3P58872 404 aa11.45□□□□□ -0.58
FN1-204ENST00000356005 AGGF1Q8N302 714 aaeCLIP11.45□□□□□ -0.58
FN1-204ENST00000356005 CCDC185Q8N715 623 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms