RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 GTF2A2P52657 109 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 OCA2Q04671 838 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 EN1Q05925 392 aaPredicted RBP7.78□□□□□ -1.16
BRCA1-201ENST00000352993 FSTL1Q12841 308 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 PRPSAP1Q14558 356 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 INAQ16352 499 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 C15orf59Q2T9L4 293 aaPredicted RBP7.78□□□□□ -1.16
BRCA1-201ENST00000352993 FAM47CQ5HY64 1035 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 DHRS4L2Q6PKH6 230 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 NAPRTQ6XQN6 538 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 KCTD8Q6ZWB6 473 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 CARM1Q86X55 608 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 CBR4Q8N4T8 237 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 CERS5Q8N5B7 392 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 FBXL18Q96ME1 805 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 TARS2Q9BW92 718 aaKnown RBP7.78□□□□□ -1.16
BRCA1-201ENST00000352993 CEP41Q9BYV8 373 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 UNKQ9C0B0 810 aaKnown RBP7.78□□□□□ -1.16
BRCA1-201ENST00000352993 POLR3FQ9H1D9 316 aaPredicted RBP7.78□□□□□ -1.16
BRCA1-201ENST00000352993 ST6GALNAC4Q9H4F1 302 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 CAB39LQ9H9S4 337 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 CTDP1Q9Y5B0 961 aaPredicted RBP7.78□□□□□ -1.16
BRCA1-201ENST00000352993 CORINQ9Y5Q5 1042 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 K7ERI5 159 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 LSM8O95777 96 aaKnown RBP7.78□□□□□ -1.16
BRCA1-201ENST00000352993 TRUB2O95900 331 aaKnown RBP7.78□□□□□ -1.16
BRCA1-201ENST00000352993 PDGFRAP16234 1089 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 MGAT1P26572 445 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 GRIA3P42263 894 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 OSTNP61366 133 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 SPP2Q13103 211 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 RAB39AQ14964 217 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 PLCL1Q15111 1095 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 MAPK11Q15759 364 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 MOGQ16653 247 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 TKFCQ3LXA3 575 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 RAVER1Q8IY67 606 aaKnown RBP7.78□□□□□ -1.16
BRCA1-201ENST00000352993 PLD6Q8N2A8 252 aaKnown RBP7.78□□□□□ -1.16
BRCA1-201ENST00000352993 BPIFB6Q8NFQ5 453 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 TNIP2Q8NFZ5 429 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 ACER1Q8TDN7 264 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 ZC3H15Q8WU90 426 aaKnown RBP7.78□□□□□ -1.16
BRCA1-201ENST00000352993 SIGLEC10Q96LC7 697 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 ZNF597Q96LX8 424 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 HERC2P3Q9BVR0 1158 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 ZFYVE28Q9HCC9 887 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 UTP6Q9NYH9 597 aaKnown RBP7.78□□□□□ -1.16
BRCA1-201ENST00000352993 GTSE1Q9NYZ3 720 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 GNPTGQ9UJJ9 305 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 DGKBQ9Y6T7 804 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 ZNF541Q9H0D2 1346 aa7.78□□□□□ -1.16
BRCA1-201ENST00000352993 CCDC78A2IDD5 438 aa7.77□□□□□ -1.16
BRCA1-201ENST00000352993 KRBA1A5PL33 1030 aa7.77□□□□□ -1.16
BRCA1-201ENST00000352993 IQCA1LA6NCM1 817 aa7.77□□□□□ -1.16
BRCA1-201ENST00000352993 ZBBXA8MT70 800 aa7.77□□□□□ -1.16
BRCA1-201ENST00000352993 ZNF195O14628 629 aa7.77□□□□□ -1.16
BRCA1-201ENST00000352993 HDAC3O15379 428 aa7.77□□□□□ -1.16
BRCA1-201ENST00000352993 GPC4O75487 556 aa7.77□□□□□ -1.16
BRCA1-201ENST00000352993 RAD17O75943 681 aa7.77□□□□□ -1.16
BRCA1-201ENST00000352993 GSRP00390 522 aa7.77□□□□□ -1.16
BRCA1-201ENST00000352993 RAP1GAPP47736 663 aa7.77□□□□□ -1.16
BRCA1-201ENST00000352993 CLCN2P51788 898 aa7.77□□□□□ -1.16
BRCA1-201ENST00000352993 NAGLUP54802 743 aa7.77□□□□□ -1.16
BRCA1-201ENST00000352993 YWHAEP62258 255 aaKnown RBP7.77□□□□□ -1.16
BRCA1-201ENST00000352993 CTBSQ01459 385 aa7.77□□□□□ -1.16
BRCA1-201ENST00000352993 TRIM25Q14258 630 aaKnown RBP7.77□□□□□ -1.16
BRCA1-201ENST00000352993 DLG2Q15700 870 aa7.77□□□□□ -1.16
BRCA1-201ENST00000352993 PGS1Q32NB8 556 aa7.77□□□□□ -1.16
BRCA1-201ENST00000352993 PITRM1Q5JRX3 1037 aa7.77□□□□□ -1.16
BRCA1-201ENST00000352993 LYSMD3Q7Z3D4 306 aa7.77□□□□□ -1.16
BRCA1-201ENST00000352993 NETO2Q8NC67 525 aa7.77□□□□□ -1.16
BRCA1-201ENST00000352993 ACMSDQ8TDX5 336 aa7.77□□□□□ -1.16
BRCA1-201ENST00000352993 CHURC1Q8WUH1 139 aa7.77□□□□□ -1.16
BRCA1-201ENST00000352993 STARD8Q92502 1023 aa7.77□□□□□ -1.16
BRCA1-201ENST00000352993 TMEM143Q96AN5 459 aa7.77□□□□□ -1.16
BRCA1-201ENST00000352993 LRRC39Q96DD0 335 aa7.77□□□□□ -1.16
BRCA1-201ENST00000352993 GATA5Q9BWX5 397 aaPredicted RBP7.77□□□□□ -1.16
BRCA1-201ENST00000352993 MTMR12Q9C0I1 747 aa7.77□□□□□ -1.16
BRCA1-201ENST00000352993 SDCBP2Q9H190 292 aa7.77□□□□□ -1.16
BRCA1-201ENST00000352993 TASP1Q9H6P5 420 aa7.77□□□□□ -1.16
BRCA1-201ENST00000352993 CCDC167Q9P0B6 97 aa7.77□□□□□ -1.16
BRCA1-201ENST00000352993 SFMBT1Q9UHJ3 866 aa7.77□□□□□ -1.16
BRCA1-201ENST00000352993 ZNF229Q9UJW7 825 aa7.77□□□□□ -1.16
BRCA1-201ENST00000352993 CROTQ9UKG9 612 aa7.77□□□□□ -1.16
BRCA1-201ENST00000352993 A0A096LPK6 155 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 HEATR9A2RTY3 570 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 E7ENX8 843 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 SOCS2O14508 198 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 C1QAP02745 245 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 LTFP02788 710 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 CRKP46108 304 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 HARS2P49590 506 aaKnown RBP7.77□□□□□ -1.17
BRCA1-201ENST00000352993 RPL14P50914 215 aaKnown RBP7.77□□□□□ -1.17
BRCA1-201ENST00000352993 STILQ15468 1287 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 DGKDQ16760 1214 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 ANO4Q32M45 955 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 RAB6CQ53S08 254 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 TBCELQ5QJ74 424 aa7.77□□□□□ -1.17
BRCA1-201ENST00000352993 SNRNP48Q6IEG0 339 aaKnown RBP7.77□□□□□ -1.17
BRCA1-201ENST00000352993 CHSY3Q70JA7 882 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms