RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 MAPRE2Q15555 327 aa13.96□□□□□ -0.17
SMC6-201ENST00000351948 CCDC185Q8N715 623 aa13.96□□□□□ -0.17
SMC6-201ENST00000351948 MED8Q96G25 268 aa13.96□□□□□ -0.17
SMC6-201ENST00000351948 GDF3Q9NR23 364 aa13.96□□□□□ -0.17
SMC6-201ENST00000351948 CORO1AP31146 461 aaKnown RBP13.96□□□□□ -0.17
SMC6-201ENST00000351948 WASP42768 502 aa13.96□□□□□ -0.17
SMC6-201ENST00000351948 LINGO4Q6UY18 593 aa13.96□□□□□ -0.17
SMC6-201ENST00000351948 ZCCHC9Q8N567 271 aaKnown RBP13.96□□□□□ -0.17
SMC6-201ENST00000351948 P2RY11Q96G91 374 aa13.96□□□□□ -0.17
SMC6-201ENST00000351948 MAF1Q9H063 256 aa13.96□□□□□ -0.17
SMC6-201ENST00000351948 TMPRSS4Q9NRS4 437 aa13.96□□□□□ -0.17
SMC6-201ENST00000351948 SLC24A2Q9UI40 661 aa13.96□□□□□ -0.17
SMC6-201ENST00000351948 TDRKHQ9Y2W6 561 aaKnown RBP13.96□□□□□ -0.17
SMC6-201ENST00000351948 YJEFN3A6XGL0 299 aa13.96□□□□□ -0.18
SMC6-201ENST00000351948 E7ENQ6 273 aa13.96□□□□□ -0.18
SMC6-201ENST00000351948 TARSP26639 723 aaKnown RBP13.96□□□□□ -0.18
SMC6-201ENST00000351948 SOAT1P35610 550 aa13.96□□□□□ -0.18
SMC6-201ENST00000351948 AQP5P55064 265 aa13.96□□□□□ -0.18
SMC6-201ENST00000351948 APBB2Q92870 758 aa13.96□□□□□ -0.18
SMC6-201ENST00000351948 MTBPQ96DY7 904 aa13.96□□□□□ -0.18
SMC6-201ENST00000351948 FBXO6Q9NRD1 293 aaPredicted RBP13.96□□□□□ -0.18
SMC6-201ENST00000351948 NOCTQ9UK39 431 aaKnown RBP13.96□□□□□ -0.18
SMC6-201ENST00000351948 C9IYK1 514 aa13.95□□□□□ -0.18
SMC6-201ENST00000351948 CCNT2O60583 730 aaKnown RBP13.95□□□□□ -0.18
SMC6-201ENST00000351948 HALP42357 657 aa13.95□□□□□ -0.18
SMC6-201ENST00000351948 GJA9P57773 515 aa13.95□□□□□ -0.18
SMC6-201ENST00000351948 PFKPQ01813 784 aa13.95□□□□□ -0.18
SMC6-201ENST00000351948 NEPROQ6NW34 567 aa13.95□□□□□ -0.18
SMC6-201ENST00000351948 CSPG4P5Q96PW8 444 aa13.95□□□□□ -0.18
SMC6-201ENST00000351948 ACOX2Q99424 681 aa13.95□□□□□ -0.18
SMC6-201ENST00000351948 VAT1Q99536 393 aa13.95□□□□□ -0.18
SMC6-201ENST00000351948 TTYH3Q9C0H2 523 aa13.95□□□□□ -0.18
SMC6-201ENST00000351948 ABCG8Q9H221 673 aa13.95□□□□□ -0.18
SMC6-201ENST00000351948 IL1RAPL1Q9NZN1 696 aa13.95□□□□□ -0.18
SMC6-201ENST00000351948 PCDHB9Q9Y5E1 797 aa13.95□□□□□ -0.18
SMC6-201ENST00000351948 A0A1W2PQ45 241 aaPredicted RBP13.95□□□□□ -0.18
SMC6-201ENST00000351948 A0A1W2PQY0 241 aa13.95□□□□□ -0.18
SMC6-201ENST00000351948 NRP1O14786 923 aa13.95□□□□□ -0.18
SMC6-201ENST00000351948 TBX18O95935 607 aa13.95□□□□□ -0.18
SMC6-201ENST00000351948 FAM107AO95990 144 aa13.95□□□□□ -0.18
SMC6-201ENST00000351948 HOXD13P35453 343 aa13.95□□□□□ -0.18
SMC6-201ENST00000351948 NPY2RP49146 381 aa13.95□□□□□ -0.18
SMC6-201ENST00000351948 GATMP50440 423 aa13.95□□□□□ -0.18
SMC6-201ENST00000351948 TRIM60Q495X7 471 aa13.95□□□□□ -0.18
SMC6-201ENST00000351948 TAPT1Q6NXT6 567 aa13.95□□□□□ -0.18
SMC6-201ENST00000351948 VSTM1Q6UX27 236 aa13.95□□□□□ -0.18
SMC6-201ENST00000351948 KDM7AQ6ZMT4 941 aa13.95□□□□□ -0.18
SMC6-201ENST00000351948 CTU1Q7Z7A3 348 aaKnown RBP13.95□□□□□ -0.18
SMC6-201ENST00000351948 LONP2Q86WA8 852 aa13.95□□□□□ -0.18
SMC6-201ENST00000351948 CHPFQ8IZ52 775 aa13.95□□□□□ -0.18
SMC6-201ENST00000351948 MCRS1Q96EZ8 462 aa13.95□□□□□ -0.18
SMC6-201ENST00000351948 MAGEB16A2A368 324 aa13.95□□□□□ -0.18
SMC6-201ENST00000351948 GJA5P36382 358 aa13.95□□□□□ -0.18
SMC6-201ENST00000351948 KIAA1324Q6UXG2 1013 aaKnown RBP13.95□□□□□ -0.18
SMC6-201ENST00000351948 POLNQ7Z5Q5 900 aa13.95□□□□□ -0.18
SMC6-201ENST00000351948 ARL14EPQ8N8R7 260 aaPredicted RBP13.95□□□□□ -0.18
SMC6-201ENST00000351948 PLEKHO2Q8TD55 490 aa13.95□□□□□ -0.18
SMC6-201ENST00000351948 NDNQ99608 321 aa13.95□□□□□ -0.18
SMC6-201ENST00000351948 ACBD6Q9BR61 282 aa13.95□□□□□ -0.18
SMC6-201ENST00000351948 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.95□□□□□ -0.18
SMC6-201ENST00000351948 TULP2O00295 520 aa13.95□□□□□ -0.18
SMC6-201ENST00000351948 SLC10A3P09131 477 aa13.95□□□□□ -0.18
SMC6-201ENST00000351948 PPIGQ13427 754 aaKnown RBP eCLIP13.95□□□□□ -0.182e-6■■□□□ 13.4
SMC6-201ENST00000351948 TRAPPC5Q8IUR0 188 aa13.95□□□□□ -0.18
SMC6-201ENST00000351948 SYTL1Q8IYJ3 562 aa13.95□□□□□ -0.18
SMC6-201ENST00000351948 FBXO22Q8NEZ5 403 aa13.95□□□□□ -0.18
SMC6-201ENST00000351948 AENQ8WTP8 325 aaKnown RBP13.95□□□□□ -0.18
SMC6-201ENST00000351948 SYTL2Q9HCH5 934 aa13.95□□□□□ -0.18
SMC6-201ENST00000351948 FUT11Q495W5 492 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 UNC5AQ6ZN44 842 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 ZNF513Q8N8E2 541 aaPredicted RBP13.94□□□□□ -0.18
SMC6-201ENST00000351948 ICA1LQ8NDH6 482 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 SRPK1Q96SB4 655 aaKnown RBP13.94□□□□□ -0.18
SMC6-201ENST00000351948 FBXO10Q9UK96 956 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 MYADML2A6NDP7 307 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 MFSD11O43934 449 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 STAU1O95793 577 aaKnown RBP13.94□□□□□ -0.18
SMC6-201ENST00000351948 RFX3P48380 749 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 PRMT2P55345 433 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 CAMK2GQ13555 558 aaPredicted RBP13.94□□□□□ -0.18
SMC6-201ENST00000351948 TAC4Q86UU9 113 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 SPATA6LQ8N4H0 392 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 MIPOL1Q8TD10 442 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 TMEM159Q96B96 161 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 ASPSCR1Q9BZE9 553 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 ACTR8Q9H981 624 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 MTO1Q9Y2Z2 717 aaKnown RBP13.94□□□□□ -0.18
SMC6-201ENST00000351948 FSCN2O14926 492 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 PHEXP78562 749 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 KCTD15Q96SI1 283 aaPredicted RBP13.94□□□□□ -0.18
SMC6-201ENST00000351948 MLPHQ9BV36 600 aaPredicted RBP13.94□□□□□ -0.18
SMC6-201ENST00000351948 C11orf49Q9H6J7 331 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 RIC8BQ9NVN3 520 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.94□□□□□ -0.18
SMC6-201ENST00000351948 RAB21Q9UL25 225 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 BTNL10A8MVZ5 291 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 BTN3A1O00481 513 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 C1RP00736 705 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 APOA4P06727 396 aa13.94□□□□□ -0.18
SMC6-201ENST00000351948 ZNF7P17097 686 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms