RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 FAM20AQ96MK3 541 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 POPDC2Q9HBU9 364 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 CYP3A4P08684 503 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 SERPINB1P30740 379 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 OGDHQ02218 1023 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 CHRNEQ04844 493 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 TRIM25Q14258 630 aaKnown RBP13.5□□□□□ -0.25
IFT88-202ENST00000351808 SPCS2Q15005 226 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 KCNT1Q5JUK3 1230 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 FAXCQ5TGI0 409 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 TMEM198Q66K66 360 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 LRRC49Q8IUZ0 686 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 DAW1Q8N136 415 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 LPGAT1Q92604 370 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 APBB2Q92870 758 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 ASB9Q96DX5 294 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 SLC4A9Q96Q91 983 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 CDK5RAP1Q96SZ6 601 aaKnown RBP13.5□□□□□ -0.25
IFT88-202ENST00000351808 SLC39A3Q9BRY0 314 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 EFCAB1Q9HAE3 211 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 MTMR4Q9NYA4 1195 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 CDK2AP1O14519 115 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 DDHD2O94830 711 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 VDRP11473 427 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 NOMO3P69849 1222 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 VPS72Q15906 364 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 CYP4V2Q6ZWL3 525 aaPredicted RBP13.5□□□□□ -0.25
IFT88-202ENST00000351808 HTRA1Q92743 480 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 TP53INP1Q96A56 240 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 MCEEQ96PE7 176 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 CLSTN3Q9BQT9 956 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 RTFDC1Q9BY42 306 aaPredicted RBP13.5□□□□□ -0.25
IFT88-202ENST00000351808 THG1LQ9NWX6 298 aaKnown RBP13.5□□□□□ -0.25
IFT88-202ENST00000351808 PCDHGC3Q9UN70 934 aa13.5□□□□□ -0.25
IFT88-202ENST00000351808 TRDMT1O14717 391 aaKnown RBP13.49□□□□□ -0.25
IFT88-202ENST00000351808 MEIS2O14770 477 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 HSPA4LO95757 839 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 SNHG28P0DPA3 235 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 CDH1P12830 882 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 EEF1B2P24534 225 aaKnown RBP13.49□□□□□ -0.25
IFT88-202ENST00000351808 EPHX2P34913 555 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 KCNJ11Q14654 390 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.49□□□□□ -0.25
IFT88-202ENST00000351808 UNC5AQ6ZN44 842 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 ESX1Q8N693 406 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 CRYGNQ8WXF5 182 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 TRIB2Q92519 343 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 WDR12Q9GZL7 423 aaKnown RBP13.49□□□□□ -0.25
IFT88-202ENST00000351808 AKIP1Q9NQ31 210 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 AASDHPPTQ9NRN7 309 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 WRAP73Q9P2S5 460 aaPredicted RBP13.49□□□□□ -0.25
IFT88-202ENST00000351808 SLC17A6Q9P2U8 582 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 CDY2AQ9Y6F7 541 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 CDY1Q9Y6F8 540 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 TMEM191CA6NGB0 347 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 M0QX08 132 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 B4GAT1O43505 415 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 ASNA1O43681 348 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 SCO2O43819 266 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 KRT3P12035 628 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 SLC7A1P30825 629 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 NUMBP49757 651 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 GTF2IP78347 998 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 RALGDSQ12967 914 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 MOXD1Q6UVY6 613 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 TXNRD3Q86VQ6 643 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 CCDC24Q8N4L8 307 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 RAB2BQ8WUD1 216 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 OSCP1Q8WVF1 389 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 MOCOSQ96EN8 888 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 BEGAINQ9BUH8 593 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 GPN2Q9H9Y4 310 aaPredicted RBP13.49□□□□□ -0.25
IFT88-202ENST00000351808 ACSS2Q9NR19 701 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 RAB6BQ9NRW1 208 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 ZNF358Q9NW07 568 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 TMEM216Q9P0N5 145 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 ZNF652Q9Y2D9 606 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 COQ4Q9Y3A0 265 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 ANGPTL3Q9Y5C1 460 aa13.49□□□□□ -0.25
IFT88-202ENST00000351808 FAM149AA5PLN7 773 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 C6orf229H3BNL8 230 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 PMM2O15305 246 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 ALX3O95076 343 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 PRKCGP05129 697 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 LDHBP07195 334 aaKnown RBP13.48□□□□□ -0.25
IFT88-202ENST00000351808 PTPN7P35236 360 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 KRT6CP48668 564 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 ECT2LQ008S8 904 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 SLC13A2Q13183 592 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 AQP6Q13520 282 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 PLCL1Q15111 1095 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 QRICH1Q2TAL8 776 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 ABRAXAS1Q6UWZ7 409 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 APBA2Q99767 749 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 TUBA1CQ9BQE3 449 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 SOX17Q9H6I2 414 aaPredicted RBP13.48□□□□□ -0.25
IFT88-202ENST00000351808 RETREG1Q9H6L5 497 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 TMEM8AQ9HCN3 771 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 COPG2Q9UBF2 871 aa13.48□□□□□ -0.25
IFT88-202ENST00000351808 AP4E1Q9UPM8 1137 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms