RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 CSE1LP55060 971 aaKnown RBP12.4□□□□□ -0.42
SMAD9-201ENST00000350148 MRPS15P82914 257 aaKnown RBP12.4□□□□□ -0.42
SMAD9-201ENST00000350148 SYTL3Q4VX76 610 aa12.4□□□□□ -0.42
SMAD9-201ENST00000350148 SERINC5Q86VE9 423 aa12.4□□□□□ -0.42
SMAD9-201ENST00000350148 RNF135Q8IUD6 432 aa12.4□□□□□ -0.42
SMAD9-201ENST00000350148 QKIQ96PU8 341 aaKnown RBP eCLIP12.4□□□□□ -0.42
SMAD9-201ENST00000350148 CSPG4P5Q96PW8 444 aa12.4□□□□□ -0.42
SMAD9-201ENST00000350148 COQ7Q99807 217 aa12.4□□□□□ -0.42
SMAD9-201ENST00000350148 PNPLA8Q9NP80 782 aa12.4□□□□□ -0.42
SMAD9-201ENST00000350148 ADGRA2Q96PE1 1338 aa12.4□□□□□ -0.42
SMAD9-201ENST00000350148 FLT3P36888 993 aa12.4□□□□□ -0.42
SMAD9-201ENST00000350148 TM4SF4P48230 202 aa12.4□□□□□ -0.42
SMAD9-201ENST00000350148 INPP1P49441 399 aa12.4□□□□□ -0.42
SMAD9-201ENST00000350148 ZNF132P52740 706 aa12.4□□□□□ -0.42
SMAD9-201ENST00000350148 YBEYP58557 167 aaPredicted RBP12.4□□□□□ -0.42
SMAD9-201ENST00000350148 TSTA3Q13630 321 aaPredicted RBP12.4□□□□□ -0.42
SMAD9-201ENST00000350148 KCNMB4Q86W47 210 aa12.4□□□□□ -0.42
SMAD9-201ENST00000350148 TSEN2Q8NCE0 465 aaKnown RBP12.4□□□□□ -0.42
SMAD9-201ENST00000350148 VPS45Q9NRW7 570 aa12.4□□□□□ -0.42
SMAD9-201ENST00000350148 CNTN6Q9UQ52 1028 aa12.4□□□□□ -0.42
SMAD9-201ENST00000350148 ZNF623O75123 536 aa12.4□□□□□ -0.42
SMAD9-201ENST00000350148 MAP3K6O95382 1288 aa12.4□□□□□ -0.42
SMAD9-201ENST00000350148 MGAT1P26572 445 aa12.4□□□□□ -0.42
SMAD9-201ENST00000350148 GABRB2P47870 512 aa12.4□□□□□ -0.42
SMAD9-201ENST00000350148 MTFR1Q15390 333 aa12.4□□□□□ -0.42
SMAD9-201ENST00000350148 CHI3L2Q15782 390 aa12.4□□□□□ -0.42
SMAD9-201ENST00000350148 RBBP7Q16576 425 aa12.4□□□□□ -0.42
SMAD9-201ENST00000350148 NANOGNBQ7Z5D8 188 aa12.4□□□□□ -0.42
SMAD9-201ENST00000350148 ILKAPQ9H0C8 392 aaPredicted RBP12.4□□□□□ -0.42
SMAD9-201ENST00000350148 PRDM12Q9H4Q4 367 aa12.4□□□□□ -0.42
SMAD9-201ENST00000350148 ASAH2Q9NR71 780 aa12.4□□□□□ -0.42
SMAD9-201ENST00000350148 TMCO1Q9UM00 188 aa12.4□□□□□ -0.42
SMAD9-201ENST00000350148 CDYLQ9Y232 598 aa12.4□□□□□ -0.42
SMAD9-201ENST00000350148 GOT1P17174 413 aa12.4□□□□□ -0.42
SMAD9-201ENST00000350148 SLC12A1Q13621 1099 aa12.4□□□□□ -0.42
SMAD9-201ENST00000350148 PARP15Q460N3 678 aa12.4□□□□□ -0.42
SMAD9-201ENST00000350148 CMTM5Q96DZ9 223 aa12.4□□□□□ -0.42
SMAD9-201ENST00000350148 PTPRHQ9HD43 1115 aa12.4□□□□□ -0.42
SMAD9-201ENST00000350148 RIC8BQ9NVN3 520 aa12.4□□□□□ -0.42
SMAD9-201ENST00000350148 AKT1P31749 480 aa12.4□□□□□ -0.43
SMAD9-201ENST00000350148 GJA5P36382 358 aa12.4□□□□□ -0.43
SMAD9-201ENST00000350148 SERPINH1P50454 418 aaKnown RBP12.4□□□□□ -0.43
SMAD9-201ENST00000350148 INAQ16352 499 aa12.4□□□□□ -0.43
SMAD9-201ENST00000350148 TPGS2Q68CL5 300 aa12.4□□□□□ -0.43
SMAD9-201ENST00000350148 TBC1D19Q8N5T2 526 aa12.4□□□□□ -0.43
SMAD9-201ENST00000350148 PTCD2Q8WV60 388 aaKnown RBP12.4□□□□□ -0.43
SMAD9-201ENST00000350148 FAM111AQ96PZ2 611 aa12.4□□□□□ -0.43
SMAD9-201ENST00000350148 SGIP1Q9BQI5 828 aa12.4□□□□□ -0.43
SMAD9-201ENST00000350148 ZMYM5Q9UJ78 669 aa12.4□□□□□ -0.43
SMAD9-201ENST00000350148 C5orf60A6NFR6 353 aa12.39□□□□□ -0.43
SMAD9-201ENST00000350148 CBX4O00257 560 aa12.39□□□□□ -0.43
SMAD9-201ENST00000350148 PIRO00625 290 aa12.39□□□□□ -0.43
SMAD9-201ENST00000350148 SRP72O76094 671 aaKnown RBP12.39□□□□□ -0.43
SMAD9-201ENST00000350148 PFKMP08237 780 aa12.39□□□□□ -0.43
SMAD9-201ENST00000350148 KITP10721 976 aa12.39□□□□□ -0.43
SMAD9-201ENST00000350148 RHOQP17081 205 aa12.39□□□□□ -0.43
SMAD9-201ENST00000350148 KBTBD12Q3ZCT8 623 aa12.39□□□□□ -0.43
SMAD9-201ENST00000350148 STK40Q8N2I9 435 aa12.39□□□□□ -0.43
SMAD9-201ENST00000350148 ACSS3Q9H6R3 686 aa12.39□□□□□ -0.43
SMAD9-201ENST00000350148 CCNB1P14635 433 aa12.39□□□□□ -0.43
SMAD9-201ENST00000350148 HCAR3P49019 387 aa12.39□□□□□ -0.43
SMAD9-201ENST00000350148 DCLK2Q8N568 766 aa12.39□□□□□ -0.43
SMAD9-201ENST00000350148 PPP1R13LQ8WUF5 828 aa12.39□□□□□ -0.43
SMAD9-201ENST00000350148 PCED1BQ96HM7 432 aa12.39□□□□□ -0.43
SMAD9-201ENST00000350148 A0A087X1B8 175 aa12.39□□□□□ -0.43
SMAD9-201ENST00000350148 WDR27A2RRH5 827 aa12.39□□□□□ -0.43
SMAD9-201ENST00000350148 GSTA4O15217 222 aa12.39□□□□□ -0.43
SMAD9-201ENST00000350148 PAPSS1O43252 624 aaPredicted RBP12.39□□□□□ -0.43
SMAD9-201ENST00000350148 EDIL3O43854 480 aa12.39□□□□□ -0.43
SMAD9-201ENST00000350148 ZNF618Q5T7W0 954 aa12.39□□□□□ -0.43
SMAD9-201ENST00000350148 POTEHQ6S545 545 aa12.39□□□□□ -0.43
SMAD9-201ENST00000350148 LRRC34Q8IZ02 419 aa12.39□□□□□ -0.43
SMAD9-201ENST00000350148 PBXIP1Q96AQ6 731 aa12.39□□□□□ -0.43
SMAD9-201ENST00000350148 EBNA1BP2Q99848 306 aaKnown RBP12.39□□□□□ -0.43
SMAD9-201ENST00000350148 ELAC1Q9H777 363 aaKnown RBP12.39□□□□□ -0.43
SMAD9-201ENST00000350148 PHTF1Q9UMS5 762 aa12.39□□□□□ -0.43
SMAD9-201ENST00000350148 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.39□□□□□ -0.43
SMAD9-201ENST00000350148 H0Y3Z8 333 aa12.39□□□□□ -0.43
SMAD9-201ENST00000350148 FANCGO15287 622 aa12.39□□□□□ -0.43
SMAD9-201ENST00000350148 HMOX2P30519 316 aa12.39□□□□□ -0.43
SMAD9-201ENST00000350148 CNKSR3Q6P9H4 555 aa12.39□□□□□ -0.43
SMAD9-201ENST00000350148 NPNTQ6UXI9 565 aa12.39□□□□□ -0.43
SMAD9-201ENST00000350148 SNRNP27Q8WVK2 155 aaKnown RBP12.39□□□□□ -0.43
SMAD9-201ENST00000350148 KCNN1Q92952 543 aa12.39□□□□□ -0.43
SMAD9-201ENST00000350148 FAM84AQ96KN4 292 aa12.39□□□□□ -0.43
SMAD9-201ENST00000350148 NPHS2Q9NP85 383 aa12.39□□□□□ -0.43
SMAD9-201ENST00000350148 TRMT13Q9NUP7 481 aaKnown RBP12.39□□□□□ -0.43
SMAD9-201ENST00000350148 ABHD14A-ACY1A0A1B0GW23 586 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 MBLAC1A4D2B0 266 aaPredicted RBP12.38□□□□□ -0.43
SMAD9-201ENST00000350148 CLDN11O75508 207 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 GCATO75600 419 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 CYP2A6P11509 494 aaPredicted RBP12.38□□□□□ -0.43
SMAD9-201ENST00000350148 SLC5A3P53794 718 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 POLR2LP62875 67 aaKnown RBP12.38□□□□□ -0.43
SMAD9-201ENST00000350148 PLD5Q8N7P1 536 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 DDX1Q92499 740 aaKnown RBP12.38□□□□□ -0.43
SMAD9-201ENST00000350148 H3BMM5 538 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 DNM1LO00429 736 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 TLR5O60602 858 aa12.38□□□□□ -0.43
SMAD9-201ENST00000350148 RNASEH1O60930 286 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms