RNA–Protein interactions for RNA: ENST00000346330.6

UBE2A-201, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2A, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-201ENST00000346330 Q6ZVU0 165 aa11.28□□□□□ -0.6
UBE2A-201ENST00000346330 CREBRFQ8IUR6 639 aa11.28□□□□□ -0.6
UBE2A-201ENST00000346330 SHC3Q92529 594 aa11.28□□□□□ -0.6
UBE2A-201ENST00000346330 FAM131CQ96AQ9 280 aa11.28□□□□□ -0.6
UBE2A-201ENST00000346330 SERAC1Q96JX3 654 aa11.28□□□□□ -0.6
UBE2A-201ENST00000346330 PPP1R13BQ96KQ4 1090 aa11.28□□□□□ -0.6
UBE2A-201ENST00000346330 BBC3Q96PG8 261 aaPredicted RBP11.28□□□□□ -0.6
UBE2A-201ENST00000346330 FAM204AQ9H8W3 233 aa11.28□□□□□ -0.6
UBE2A-201ENST00000346330 VANGL2Q9ULK5 521 aa11.28□□□□□ -0.6
UBE2A-201ENST00000346330 FZD4Q9ULV1 537 aa11.28□□□□□ -0.6
UBE2A-201ENST00000346330 SCML1Q9UN30 329 aa11.28□□□□□ -0.6
UBE2A-201ENST00000346330 HS3ST4Q9Y661 456 aa11.28□□□□□ -0.6
UBE2A-201ENST00000346330 TP53BP1Q12888 1972 aaPredicted RBP11.28□□□□□ -0.6
UBE2A-201ENST00000346330 PLXNA2O75051 1894 aa11.27□□□□□ -0.6
UBE2A-201ENST00000346330 CFAP46Q8IYW2 2715 aa11.27□□□□□ -0.61
UBE2A-201ENST00000346330 A0A1B0GVM2 712 aa11.27□□□□□ -0.61
UBE2A-201ENST00000346330 TCAF2A6NFQ2 919 aa11.27□□□□□ -0.61
UBE2A-201ENST00000346330 LRRC72A6NJI9 287 aa11.27□□□□□ -0.61
UBE2A-201ENST00000346330 MED7O43513 233 aa11.27□□□□□ -0.61
UBE2A-201ENST00000346330 SNAP91O60641 907 aa11.27□□□□□ -0.61
UBE2A-201ENST00000346330 RNASEH1O60930 286 aaKnown RBP11.27□□□□□ -0.61
UBE2A-201ENST00000346330 PAGE1O75459 146 aa11.27□□□□□ -0.61
UBE2A-201ENST00000346330 ADCY5O95622 1261 aa11.27□□□□□ -0.61
UBE2A-201ENST00000346330 CTSLP07711 333 aa11.27□□□□□ -0.61
UBE2A-201ENST00000346330 C5AR1P21730 350 aa11.27□□□□□ -0.61
UBE2A-201ENST00000346330 CD38P28907 300 aa11.27□□□□□ -0.61
UBE2A-201ENST00000346330 CLCN1P35523 988 aa11.27□□□□□ -0.61
UBE2A-201ENST00000346330 CCR5P51681 352 aa11.27□□□□□ -0.61
UBE2A-201ENST00000346330 PLK1P53350 603 aa11.27□□□□□ -0.61
UBE2A-201ENST00000346330 NXPH1P58417 271 aa11.27□□□□□ -0.61
UBE2A-201ENST00000346330 TAS2R38P59533 333 aa11.27□□□□□ -0.61
UBE2A-201ENST00000346330 CNTN1Q12860 1018 aa11.27□□□□□ -0.61
UBE2A-201ENST00000346330 ELAVL3Q14576 367 aaKnown RBP11.27□□□□□ -0.61
UBE2A-201ENST00000346330 SUZ12Q15022 739 aaKnown RBP11.27□□□□□ -0.61
UBE2A-201ENST00000346330 MEA1Q16626 185 aa11.27□□□□□ -0.61
UBE2A-201ENST00000346330 ALFQ53S48 1182 aa11.27□□□□□ -0.61
UBE2A-201ENST00000346330 C2CD6Q53TS8 623 aa11.27□□□□□ -0.61
UBE2A-201ENST00000346330 AGBL4Q5VU57 503 aa11.27□□□□□ -0.61
UBE2A-201ENST00000346330 RNF219Q5W0B1 726 aaPredicted RBP11.27□□□□□ -0.61
UBE2A-201ENST00000346330 TRNP1Q6NT89 227 aa11.27□□□□□ -0.61
UBE2A-201ENST00000346330 KANSL1Q7Z3B3 1105 aa11.27□□□□□ -0.61
UBE2A-201ENST00000346330 PDZD3Q86UT5 571 aa11.27□□□□□ -0.61
UBE2A-201ENST00000346330 SLC47A2Q86VL8 602 aa11.27□□□□□ -0.61
UBE2A-201ENST00000346330 ZNF683Q8IZ20 524 aa11.27□□□□□ -0.61
UBE2A-201ENST00000346330 EID2Q8N6I1 236 aa11.27□□□□□ -0.61
UBE2A-201ENST00000346330 ATP6V0D2Q8N8Y2 350 aa11.27□□□□□ -0.61
UBE2A-201ENST00000346330 ZNF557Q8N988 423 aaPredicted RBP11.27□□□□□ -0.61
UBE2A-201ENST00000346330 RPRD1AQ96P16 312 aaPredicted RBP11.27□□□□□ -0.61
UBE2A-201ENST00000346330 PSMB7Q99436 277 aa11.27□□□□□ -0.61
UBE2A-201ENST00000346330 FEM1AQ9BSK4 669 aa11.27□□□□□ -0.61
UBE2A-201ENST00000346330 PIGVQ9NUD9 493 aa11.27□□□□□ -0.61
UBE2A-201ENST00000346330 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.27□□□□□ -0.61
UBE2A-201ENST00000346330 APEX2Q9UBZ4 518 aa11.27□□□□□ -0.61
UBE2A-201ENST00000346330 FTSJ1Q9UET6 329 aa11.27□□□□□ -0.61
UBE2A-201ENST00000346330 TBC1D3DA0A087WVF3 549 aa11.26□□□□□ -0.61
UBE2A-201ENST00000346330 TBC1D3IA0A087WXS9 549 aa11.26□□□□□ -0.61
UBE2A-201ENST00000346330 TBC1D3EA0A087X179 549 aa11.26□□□□□ -0.61
UBE2A-201ENST00000346330 TBC1D3KA0A087X1G2 549 aa11.26□□□□□ -0.61
UBE2A-201ENST00000346330 TBC1D3FA6NER0 549 aaPredicted RBP11.26□□□□□ -0.61
UBE2A-201ENST00000346330 TBC1D3LB9A6J9 549 aa11.26□□□□□ -0.61
UBE2A-201ENST00000346330 FOXN3O00409 490 aaPredicted RBP11.26□□□□□ -0.61
UBE2A-201ENST00000346330 ENC1O14682 589 aa11.26□□□□□ -0.61
UBE2A-201ENST00000346330 ATP9BO43861 1147 aa11.26□□□□□ -0.61
UBE2A-201ENST00000346330 BNIP3LO60238 219 aa11.26□□□□□ -0.61
UBE2A-201ENST00000346330 SDC3O75056 442 aa11.26□□□□□ -0.61
UBE2A-201ENST00000346330 MOCS3O95396 460 aa11.26□□□□□ -0.61
UBE2A-201ENST00000346330 ADH1BP00325 375 aa11.26□□□□□ -0.61
UBE2A-201ENST00000346330 TBC1D3HP0C7X1 549 aa11.26□□□□□ -0.61
UBE2A-201ENST00000346330 EPHA8P29322 1005 aaPredicted RBP11.26□□□□□ -0.61
UBE2A-201ENST00000346330 CCR1P32246 355 aa11.26□□□□□ -0.61
UBE2A-201ENST00000346330 CDK17Q00537 523 aa11.26□□□□□ -0.61
UBE2A-201ENST00000346330 DLG2Q15700 870 aa11.26□□□□□ -0.61
UBE2A-201ENST00000346330 ACCSLQ4AC99 568 aa11.26□□□□□ -0.61
UBE2A-201ENST00000346330 SOWAHCQ53LP3 525 aaPredicted RBP11.26□□□□□ -0.61
UBE2A-201ENST00000346330 RAB6CQ53S08 254 aa11.26□□□□□ -0.61
UBE2A-201ENST00000346330 HSP90AA4PQ58FG1 418 aa11.26□□□□□ -0.61
UBE2A-201ENST00000346330 TBC1D3GQ6DHY5 549 aa11.26□□□□□ -0.61
UBE2A-201ENST00000346330 OR6B2Q6IFH4 312 aa11.26□□□□□ -0.61
UBE2A-201ENST00000346330 TBC1D3CQ6IPX1 549 aa11.26□□□□□ -0.61
UBE2A-201ENST00000346330 SND1Q7KZF4 910 aaKnown RBP eCLIP11.26□□□□□ -0.619e-6■■■■□ 21.9
UBE2A-201ENST00000346330 ENOSF1Q7L5Y1 443 aa11.26□□□□□ -0.61
UBE2A-201ENST00000346330 CCDC117Q8IWD4 279 aaPredicted RBP11.26□□□□□ -0.61
UBE2A-201ENST00000346330 TBC1D3Q8IZP1 549 aaPredicted RBP11.26□□□□□ -0.61
UBE2A-201ENST00000346330 KLK6Q92876 244 aa11.26□□□□□ -0.61
UBE2A-201ENST00000346330 RNF34Q969K3 372 aa11.26□□□□□ -0.61
UBE2A-201ENST00000346330 CNDP2Q96KP4 475 aaKnown RBP11.26□□□□□ -0.61
UBE2A-201ENST00000346330 SPAG5Q96R06 1193 aa11.26□□□□□ -0.61
UBE2A-201ENST00000346330 MYOCQ99972 504 aa11.26□□□□□ -0.61
UBE2A-201ENST00000346330 SIK2Q9H0K1 926 aa11.26□□□□□ -0.61
UBE2A-201ENST00000346330 RAB6CQ9H0N0 254 aa11.26□□□□□ -0.61
UBE2A-201ENST00000346330 KIAA1468Q9P260 1216 aa11.26□□□□□ -0.61
UBE2A-201ENST00000346330 RWDD2AQ9UIY3 292 aa11.26□□□□□ -0.61
UBE2A-201ENST00000346330 PPM1HQ9ULR3 514 aa11.26□□□□□ -0.61
UBE2A-201ENST00000346330 PCDHGC3Q9UN70 934 aa11.26□□□□□ -0.61
UBE2A-201ENST00000346330 NYNRINQ9P2P1 1898 aaKnown RBP11.25□□□□□ -0.61
UBE2A-201ENST00000346330 A0A0D9SEW6 157 aa11.25□□□□□ -0.61
UBE2A-201ENST00000346330 M0QYT0 321 aa11.25□□□□□ -0.61
UBE2A-201ENST00000346330 TLR4O00206 839 aa11.25□□□□□ -0.61
UBE2A-201ENST00000346330 SMAD6O43541 496 aaKnown RBP11.25□□□□□ -0.61
UBE2A-201ENST00000346330 PLRG1O43660 514 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms