RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 APOC4-APOC2K7ER74 178 aa15.25■□□□□ 0.03
UBE3B-202ENST00000342494 APOC2P02655 101 aa15.25■□□□□ 0.03
UBE3B-202ENST00000342494 SERPINE1P05121 402 aa15.25■□□□□ 0.03
UBE3B-202ENST00000342494 RBL1P28749 1068 aa15.25■□□□□ 0.03
UBE3B-202ENST00000342494 VHLP40337 213 aa15.25■□□□□ 0.03
UBE3B-202ENST00000342494 RASA2Q15283 850 aa15.25■□□□□ 0.03
UBE3B-202ENST00000342494 FAM126BQ8IXS8 530 aa15.25■□□□□ 0.03
UBE3B-202ENST00000342494 HJURPQ8NCD3 748 aaPredicted RBP15.25■□□□□ 0.03
UBE3B-202ENST00000342494 PURBQ96QR8 312 aaKnown RBP15.25■□□□□ 0.03
UBE3B-202ENST00000342494 PRDM16Q9HAZ2 1276 aa15.25■□□□□ 0.03
UBE3B-202ENST00000342494 RPRD1BQ9NQG5 326 aaKnown RBP15.25■□□□□ 0.03
UBE3B-202ENST00000342494 LRRC4BQ9NT99 713 aa15.25■□□□□ 0.03
UBE3B-202ENST00000342494 PCDHGA4Q9Y5G9 962 aa15.25■□□□□ 0.03
UBE3B-202ENST00000342494 SLC1A6P48664 564 aa15.25■□□□□ 0.03
UBE3B-202ENST00000342494 PRKAA2P54646 552 aa15.25■□□□□ 0.03
UBE3B-202ENST00000342494 CNGA2Q16280 664 aa15.25■□□□□ 0.03
UBE3B-202ENST00000342494 FAM46CQ5VWP2 391 aa15.25■□□□□ 0.03
UBE3B-202ENST00000342494 FBXW10Q5XX13 1052 aa15.25■□□□□ 0.03
UBE3B-202ENST00000342494 DCLRE1AQ6PJP8 1040 aa15.25■□□□□ 0.03
UBE3B-202ENST00000342494 MACC1Q6ZN28 852 aa15.25■□□□□ 0.03
UBE3B-202ENST00000342494 MTERF3Q96E29 417 aa15.25■□□□□ 0.03
UBE3B-202ENST00000342494 ADI1Q9BV57 179 aa15.25■□□□□ 0.03
UBE3B-202ENST00000342494 EXO5Q9H790 373 aa15.25■□□□□ 0.03
UBE3B-202ENST00000342494 RGS14O43566 566 aa15.25■□□□□ 0.03
UBE3B-202ENST00000342494 TBC1D12O60347 775 aa15.25■□□□□ 0.03
UBE3B-202ENST00000342494 GLUD1P00367 558 aa15.25■□□□□ 0.03
UBE3B-202ENST00000342494 C1DQ13901 141 aaKnown RBP15.25■□□□□ 0.03
UBE3B-202ENST00000342494 PARP6Q2NL67 630 aa15.25■□□□□ 0.03
UBE3B-202ENST00000342494 DET1Q7L5Y6 550 aa15.25■□□□□ 0.03
UBE3B-202ENST00000342494 SYT12Q8IV01 421 aa15.25■□□□□ 0.03
UBE3B-202ENST00000342494 STARD8Q92502 1023 aa15.25■□□□□ 0.03
UBE3B-202ENST00000342494 HGH1Q9BTY7 390 aa15.25■□□□□ 0.03
UBE3B-202ENST00000342494 F8VP50 259 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 CES2O00748 559 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 ZNF862O60290 1169 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 FCGR1AP12314 374 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 NTSP30990 170 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 CD86P42081 329 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 SMAD3P84022 425 aaKnown RBP15.24■□□□□ 0.03
UBE3B-202ENST00000342494 GATAD2AQ86YP4 633 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 IFNLR1Q8IU57 520 aaPredicted RBP15.24■□□□□ 0.03
UBE3B-202ENST00000342494 ZYG11BQ9C0D3 744 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 CDT1Q9H211 546 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 VTI1BQ9UEU0 232 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 PSME2Q9UL46 239 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 GIT1Q9Y2X7 761 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 NDUFAF1Q9Y375 327 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 UBIAD1Q9Y5Z9 338 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 TYW3Q6IPR3 259 aaKnown RBP15.24■□□□□ 0.03
UBE3B-202ENST00000342494 C1orf186Q6ZWK4 172 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 HNRNPLLQ8WVV9 542 aaKnown RBP15.24■□□□□ 0.03
UBE3B-202ENST00000342494 SEMA4DQ92854 862 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 RSPH9Q9H1X1 276 aaPredicted RBP15.24■□□□□ 0.03
UBE3B-202ENST00000342494 SLC24A3Q9HC58 644 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 BLOC1S4Q9NUP1 217 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 NAALADL1Q9UQQ1 740 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 PSMD10O75832 226 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 PECAM1P16284 738 aaPredicted RBP15.24■□□□□ 0.03
UBE3B-202ENST00000342494 SOX6P35712 828 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 IRF8Q02556 426 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 RCN1Q15293 331 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 SCARA3Q6AZY7 606 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 DNAJC14Q6Y2X3 702 aaPredicted RBP15.24■□□□□ 0.03
UBE3B-202ENST00000342494 TMBIM4Q9HC24 238 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 ARHGAP28Q9P2N2 729 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 MEI4A8MW99 385 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 UQCRBP14927 111 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 RHBDL3P58872 404 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.24■□□□□ 0.03
UBE3B-202ENST00000342494 TRIM71Q2Q1W2 868 aaKnown RBP15.24■□□□□ 0.03
UBE3B-202ENST00000342494 C15orf59Q2T9L4 293 aaPredicted RBP15.24■□□□□ 0.03
UBE3B-202ENST00000342494 FAM98BQ52LJ0 330 aaKnown RBP15.24■□□□□ 0.03
UBE3B-202ENST00000342494 FAM45BPQ6NSW5 357 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 PIGZQ86VD9 579 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 FAM228AQ86W67 206 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 TPD52L3Q96J77 140 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 NSMCE2Q96MF7 247 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 DNPEPQ9ULA0 475 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 SLIT1O75093 1534 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 CCDC154A6NI56 674 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 ANXA5P08758 320 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 CALB2P22676 271 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 CXCR2P25025 360 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 RRP1BQ14684 758 aaKnown RBP15.24■□□□□ 0.03
UBE3B-202ENST00000342494 CEP78Q5JTW2 689 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 PLPP4Q5VZY2 271 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 NEPROQ6NW34 567 aa15.24■□□□□ 0.03
UBE3B-202ENST00000342494 MTDHQ86UE4 582 aaKnown RBP15.24■□□□□ 0.03
UBE3B-202ENST00000342494 DSG1Q02413 1049 aa15.23■□□□□ 0.03
UBE3B-202ENST00000342494 C15orf52Q6ZUT6 534 aaKnown RBP15.23■□□□□ 0.03
UBE3B-202ENST00000342494 METTL3Q86U44 580 aaKnown RBP15.23■□□□□ 0.03
UBE3B-202ENST00000342494 UBE2E3Q969T4 207 aa15.23■□□□□ 0.03
UBE3B-202ENST00000342494 COL26A1Q96A83 441 aa15.23■□□□□ 0.03
UBE3B-202ENST00000342494 PXDNQ92626 1479 aa15.23■□□□□ 0.03
UBE3B-202ENST00000342494 TRDMT1O14717 391 aaKnown RBP15.23■□□□□ 0.03
UBE3B-202ENST00000342494 SSTR1P30872 391 aa15.23■□□□□ 0.03
UBE3B-202ENST00000342494 SARSP49591 514 aaKnown RBP15.23■□□□□ 0.03
UBE3B-202ENST00000342494 PLK1P53350 603 aa15.23■□□□□ 0.03
UBE3B-202ENST00000342494 FGD3Q5JSP0 725 aa15.23■□□□□ 0.03
UBE3B-202ENST00000342494 FOXR1Q6PIV2 292 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms