RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 DRICH1Q6PGQ1 229 aaPredicted RBP12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 CCDC81Q6ZN84 652 aa12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 SPATA2LQ8IUW3 424 aaPredicted RBP12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 RMND5BQ96G75 393 aaPredicted RBP12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 PDGFDQ9GZP0 370 aaPredicted RBP12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 SDCBP2Q9H190 292 aa12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 MINDY3Q9H8M7 445 aa12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 NDUFA13Q9P0J0 144 aa12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 OR12D3Q9UGF7 316 aa12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 LRRC42Q9Y546 428 aa12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 RGSL1A5PLK6 1076 aa12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 ADM5C9JUS6 153 aa12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 APOA4P06727 396 aa12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 DLDP09622 509 aaKnown RBP12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 CCR1P32246 355 aa12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 ARL13AQ5H913 290 aaPredicted RBP12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 GK5Q6ZS86 529 aa12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 UTS2BQ765I0 119 aa12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 ASRGL1Q7L266 308 aa12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 PSTKQ8IV42 348 aaKnown RBP12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 PHTF2Q8N3S3 785 aa12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 FBXW8Q8N3Y1 598 aa12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 AP4S1Q9Y587 144 aa12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 SNX10Q9Y5X0 201 aa12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 FAM95CA0A1B0GW59 222 aa12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 CCL22O00626 93 aa12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 TGDSO95455 350 aa12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 PSMA4P25789 261 aaKnown RBP12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 MAXP61244 160 aa12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 DLG1Q12959 904 aa12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 GRIK4Q16099 956 aa12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 ZIK1Q3SY52 487 aaPredicted RBP12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 PITRM1Q5JRX3 1037 aa12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 DPY19L2P1Q6NXN4 242 aa12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 GIPC2Q8TF65 315 aa12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 ZBTB18Q99592 522 aa12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 ZNF670Q9BS34 389 aa12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 THUMPD3Q9BV44 507 aaKnown RBP12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 LHX5Q9H2C1 402 aa12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 TBC1D23Q9NUY8 699 aa12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 CD274Q9NZQ7 290 aa12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 MFHAS1Q9Y4C4 1052 aa12.65□□□□□ -0.38
SNRNP48-201ENST00000342415 SLIT2O94813 1529 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 MYOCOSA0A1B0GUC4 107 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 C2CD4BA6NLJ0 364 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 STRNO43815 780 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 MAGEC1O60732 1142 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 RHOBTB1O94844 696 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 SLC25A27O95847 323 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 GPD2P43304 727 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 ASPAP45381 313 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 CD151P48509 253 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 GALK1P51570 392 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 ADARP55265 1226 aaKnown RBP12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 KCNK10P57789 538 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 NFYCQ13952 458 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 VGLL4Q14135 290 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 ZNF484Q5JVG2 852 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 PPM1LQ5SGD2 360 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 FKBP1CQ5VVH2 108 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 TSHZ1Q6ZSZ6 1077 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 DENND1AQ8TEH3 1009 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 DCUN1D1Q96GG9 259 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 NR1H4Q96RI1 486 aaPredicted RBP12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 ALG9Q9H6U8 611 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 CROTQ9UKG9 612 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 RPL26L1Q9UNX3 145 aaKnown RBP12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 GNEQ9Y223 722 aaKnown RBP12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 ANXA9O76027 345 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 POMCP01189 267 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 ALBP02768 609 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 LGALS2P05162 132 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 CCDC166P0CW27 439 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 ACTR3P61158 418 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 GSTA3Q16772 222 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 SLC44A4Q53GD3 710 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 MTX3Q5HYI7 312 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 SPANXN3Q5MJ09 141 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 SCARA3Q6AZY7 606 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 LINC00523Q86TU6 105 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 LDB1Q86U70 411 aaPredicted RBP12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 CHSY1Q86X52 802 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 DHFR2Q86XF0 187 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 DNAJB14Q8TBM8 379 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 GATA5Q9BWX5 397 aaPredicted RBP12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 NXF3Q9H4D5 531 aaKnown RBP12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 ZNF214Q9UL59 606 aaPredicted RBP12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 EFR3BQ9Y2G0 817 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 ATP8B3O60423 1300 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 FAM149AA5PLN7 773 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 MYO1GB0I1T2 1018 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 PSMD12O00232 456 aaPredicted RBP12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 LIN7AO14910 233 aaPredicted RBP12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 MTSS1O43312 755 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 MSCO60682 206 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 NDUFV1P49821 464 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 IDH3AP50213 366 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 CELF3Q5SZQ8 465 aaKnown RBP12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 DSELQ8IZU8 1212 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 OR52K2Q8NGK3 314 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms