RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 C5AR1P21730 350 aa20.71■□□□□ 0.91
SYNE2-201ENST00000341472 CD27P26842 260 aa20.71■□□□□ 0.91
SYNE2-201ENST00000341472 PSMD8P48556 350 aa20.71■□□□□ 0.91
SYNE2-201ENST00000341472 GALCP54803 685 aa20.71■□□□□ 0.91
SYNE2-201ENST00000341472 KRT83P78385 493 aa20.71■□□□□ 0.91
SYNE2-201ENST00000341472 ELAVL3Q14576 367 aaKnown RBP20.71■□□□□ 0.91
SYNE2-201ENST00000341472 DLG2Q15700 870 aa20.71■□□□□ 0.91
SYNE2-201ENST00000341472 ALFQ53S48 1182 aa20.71■□□□□ 0.91
SYNE2-201ENST00000341472 KIAA0895LQ68EN5 471 aa20.71■□□□□ 0.91
SYNE2-201ENST00000341472 IL27RAQ6UWB1 636 aa20.71■□□□□ 0.91
SYNE2-201ENST00000341472 APTXQ7Z2E3 356 aaKnown RBP20.71■□□□□ 0.91
SYNE2-201ENST00000341472 BNIPLQ7Z465 357 aa20.71■□□□□ 0.91
SYNE2-201ENST00000341472 AOPEPQ8N6M6 819 aa20.71■□□□□ 0.91
SYNE2-201ENST00000341472 EMC1Q8N766 993 aa20.71■□□□□ 0.91
SYNE2-201ENST00000341472 FRS2Q8WU20 508 aa20.71■□□□□ 0.91
SYNE2-201ENST00000341472 RXFP2Q8WXD0 754 aa20.71■□□□□ 0.91
SYNE2-201ENST00000341472 C11orf70Q9BRQ4 267 aa20.71■□□□□ 0.91
SYNE2-201ENST00000341472 HSD3B7Q9H2F3 369 aa20.71■□□□□ 0.91
SYNE2-201ENST00000341472 OSGEPQ9NPF4 335 aa20.71■□□□□ 0.91
SYNE2-201ENST00000341472 METTL5Q9NRN9 209 aaKnown RBP20.71■□□□□ 0.91
SYNE2-201ENST00000341472 TMPRSS4Q9NRS4 437 aa20.71■□□□□ 0.91
SYNE2-201ENST00000341472 TMEM63CQ9P1W3 806 aa20.71■□□□□ 0.91
SYNE2-201ENST00000341472 LRRC72A6NJI9 287 aa20.7■□□□□ 0.9
SYNE2-201ENST00000341472 ADH1BP00325 375 aa20.7■□□□□ 0.9
SYNE2-201ENST00000341472 UNGP13051 313 aaPredicted RBP20.7■□□□□ 0.9
SYNE2-201ENST00000341472 PTMSP20962 102 aa20.7■□□□□ 0.9
SYNE2-201ENST00000341472 SDC4P31431 198 aa20.7■□□□□ 0.9
SYNE2-201ENST00000341472 CSNK1EP49674 416 aaKnown RBP20.7■□□□□ 0.9
SYNE2-201ENST00000341472 AFF3P51826 1226 aaKnown RBP20.7■□□□□ 0.9
SYNE2-201ENST00000341472 SHC2P98077 582 aa20.7■□□□□ 0.9
SYNE2-201ENST00000341472 ATP11AP98196 1134 aa20.7■□□□□ 0.9
SYNE2-201ENST00000341472 TEAD4Q15561 434 aa20.7■□□□□ 0.9
SYNE2-201ENST00000341472 ANO6Q4KMQ2 910 aa20.7■□□□□ 0.9
SYNE2-201ENST00000341472 DSG4Q86SJ6 1040 aa20.7■□□□□ 0.9
SYNE2-201ENST00000341472 SETD3Q86TU7 594 aaPredicted RBP20.7■□□□□ 0.9
SYNE2-201ENST00000341472 FAM131BQ86XD5 332 aa20.7■□□□□ 0.9
SYNE2-201ENST00000341472 MPP6Q9NZW5 540 aa20.7■□□□□ 0.9
SYNE2-201ENST00000341472 ADAM22Q9P0K1 906 aa20.7■□□□□ 0.9
SYNE2-201ENST00000341472 SERGEFQ9UGK8 458 aa20.7■□□□□ 0.9
SYNE2-201ENST00000341472 ADAMTS1Q9UHI8 967 aa20.7■□□□□ 0.9
SYNE2-201ENST00000341472 FZD4Q9ULV1 537 aa20.7■□□□□ 0.9
SYNE2-201ENST00000341472 PLXND1Q9Y4D7 1925 aa20.7■□□□□ 0.9
SYNE2-201ENST00000341472 A0A1B0GVT2 93 aa20.69■□□□□ 0.9
SYNE2-201ENST00000341472 SMTNL1A8MU46 457 aa20.69■□□□□ 0.9
SYNE2-201ENST00000341472 E9PAM4 449 aa20.69■□□□□ 0.9
SYNE2-201ENST00000341472 GJB3O75712 270 aa20.69■□□□□ 0.9
SYNE2-201ENST00000341472 ATP1A3P13637 1013 aa20.69■□□□□ 0.9
SYNE2-201ENST00000341472 NSFP46459 744 aaKnown RBP20.69■□□□□ 0.9
SYNE2-201ENST00000341472 BNC1Q01954 994 aa20.69■□□□□ 0.9
SYNE2-201ENST00000341472 HNRNPDQ14103 355 aaKnown RBP20.69■□□□□ 0.9
SYNE2-201ENST00000341472 CLEC16AQ2KHT3 1053 aa20.69■□□□□ 0.9
SYNE2-201ENST00000341472 CCDC14Q49A88 953 aa20.69■□□□□ 0.9
SYNE2-201ENST00000341472 C6orf118Q5T5N4 469 aa20.69■□□□□ 0.9
SYNE2-201ENST00000341472 FAM46CQ5VWP2 391 aa20.69■□□□□ 0.9
SYNE2-201ENST00000341472 NCEH1Q6PIU2 408 aa20.69■□□□□ 0.9
SYNE2-201ENST00000341472 OR2T34Q8NGX1 318 aa20.69■□□□□ 0.9
SYNE2-201ENST00000341472 OR8D1Q8WZ84 308 aa20.69■□□□□ 0.9
SYNE2-201ENST00000341472 AGPAT1Q99943 283 aa20.69■□□□□ 0.9
SYNE2-201ENST00000341472 C2orf49Q9BVC5 232 aaPredicted RBP20.69■□□□□ 0.9
SYNE2-201ENST00000341472 GAREM1Q9H706 876 aa20.69■□□□□ 0.9
SYNE2-201ENST00000341472 TM9SF3Q9HD45 589 aa20.69■□□□□ 0.9
SYNE2-201ENST00000341472 SEPT11Q9NVA2 429 aaKnown RBP20.69■□□□□ 0.9
SYNE2-201ENST00000341472 PI4KAP42356 2102 aa20.68■□□□□ 0.9
SYNE2-201ENST00000341472 IGLV3-10A0A075B6K4 115 aa20.68■□□□□ 0.9
SYNE2-201ENST00000341472 SH3BP5O60239 455 aa20.68■□□□□ 0.9
SYNE2-201ENST00000341472 IGHV4-34P06331 123 aa20.68■□□□□ 0.9
SYNE2-201ENST00000341472 CCDC172P0C7W6 258 aa20.68■□□□□ 0.9
SYNE2-201ENST00000341472 KRT3P12035 628 aa20.68■□□□□ 0.9
SYNE2-201ENST00000341472 OR1E1P30953 314 aa20.68■□□□□ 0.9
SYNE2-201ENST00000341472 ADRA1BP35368 520 aa20.68■□□□□ 0.9
SYNE2-201ENST00000341472 PTP4A2Q12974 167 aa20.68■□□□□ 0.9
SYNE2-201ENST00000341472 HLA-BQ31612 363 aa20.68■□□□□ 0.9
SYNE2-201ENST00000341472 ARL13BQ3SXY8 428 aa20.68■□□□□ 0.9
SYNE2-201ENST00000341472 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.68■□□□□ 0.9
SYNE2-201ENST00000341472 TFAP2DQ7Z6R9 452 aa20.68■□□□□ 0.9
SYNE2-201ENST00000341472 PHF13Q86YI8 300 aaPredicted RBP20.68■□□□□ 0.9
SYNE2-201ENST00000341472 SH2D3CQ8N5H7 860 aa20.68■□□□□ 0.9
SYNE2-201ENST00000341472 AADATQ8N5Z0 425 aa20.68■□□□□ 0.9
SYNE2-201ENST00000341472 OR14C36Q8NHC7 312 aa20.68■□□□□ 0.9
SYNE2-201ENST00000341472 BPIFA3Q9BQP9 254 aa20.68■□□□□ 0.9
SYNE2-201ENST00000341472 SLCO1B1Q9Y6L6 691 aa20.68■□□□□ 0.9
SYNE2-201ENST00000341472 CHD8Q9HCK8 2581 aa20.68■□□□□ 0.9
SYNE2-201ENST00000341472 ASCC3Q8N3C0 2202 aaKnown RBP20.68■□□□□ 0.9
SYNE2-201ENST00000341472 CACNA1EQ15878 2313 aa20.67■□□□□ 0.9
SYNE2-201ENST00000341472 CKAP5Q14008 2032 aa20.67■□□□□ 0.9
SYNE2-201ENST00000341472 SPAARA0A1B0GVQ0 90 aa20.67■□□□□ 0.9
SYNE2-201ENST00000341472 C2CD4BA6NLJ0 364 aa20.67■□□□□ 0.9
SYNE2-201ENST00000341472 MCF2LO15068 1137 aa20.67■□□□□ 0.9
SYNE2-201ENST00000341472 SNAP91O60641 907 aa20.67■□□□□ 0.9
SYNE2-201ENST00000341472 CER1O95813 267 aa20.67■□□□□ 0.9
SYNE2-201ENST00000341472 MT-CO1P00395 513 aa20.67■□□□□ 0.9
SYNE2-201ENST00000341472 CALB1P05937 261 aa20.67■□□□□ 0.9
SYNE2-201ENST00000341472 SIM1P81133 766 aaPredicted RBP20.67■□□□□ 0.9
SYNE2-201ENST00000341472 FOXC1Q12948 553 aa20.67■□□□□ 0.9
SYNE2-201ENST00000341472 CDO1Q16878 200 aa20.67■□□□□ 0.9
SYNE2-201ENST00000341472 C15orf59Q2T9L4 293 aaPredicted RBP20.67■□□□□ 0.9
SYNE2-201ENST00000341472 KIF19Q2TAC6 998 aa20.67■□□□□ 0.9
SYNE2-201ENST00000341472 ATP11CQ8NB49 1132 aa20.67■□□□□ 0.9
SYNE2-201ENST00000341472 JOSD2Q8TAC2 188 aa20.67■□□□□ 0.9
SYNE2-201ENST00000341472 PSMB7Q99436 277 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms