RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 UBP1Q9NZI7 540 aa20.55■□□□□ 0.88
SPG7-202ENST00000341316 HBS1LQ9Y450 684 aaKnown RBP20.55■□□□□ 0.88
SPG7-202ENST00000341316 ZCWPW2A0A1B0GU75 182 aa20.55■□□□□ 0.88
SPG7-202ENST00000341316 ITM2AO43736 263 aa20.55■□□□□ 0.88
SPG7-202ENST00000341316 PLIN3O60664 434 aa20.55■□□□□ 0.88
SPG7-202ENST00000341316 TUBP50607 506 aa20.55■□□□□ 0.88
SPG7-202ENST00000341316 NAB1Q13506 487 aa20.55■□□□□ 0.88
SPG7-202ENST00000341316 SNX30Q5VWJ9 437 aa20.55■□□□□ 0.88
SPG7-202ENST00000341316 MBLAC2Q68D91 279 aa20.55■□□□□ 0.88
SPG7-202ENST00000341316 ATG14Q6ZNE5 492 aa20.55■□□□□ 0.88
SPG7-202ENST00000341316 TMEM135Q86UB9 458 aa20.55■□□□□ 0.88
SPG7-202ENST00000341316 DNAAF3Q8N9W5 541 aa20.55■□□□□ 0.88
SPG7-202ENST00000341316 RAB3IL1Q8TBN0 382 aa20.55■□□□□ 0.88
SPG7-202ENST00000341316 NRG4Q8WWG1 115 aa20.55■□□□□ 0.88
SPG7-202ENST00000341316 YIPF3Q9GZM5 350 aa20.55■□□□□ 0.88
SPG7-202ENST00000341316 NEU3Q9UQ49 428 aa20.55■□□□□ 0.88
SPG7-202ENST00000341316 COL4A4P53420 1690 aaPredicted RBP20.55■□□□□ 0.88
SPG7-202ENST00000341316 ADAMTS4O75173 837 aa20.54■□□□□ 0.88
SPG7-202ENST00000341316 LYPLA1O75608 230 aaPredicted RBP20.54■□□□□ 0.88
SPG7-202ENST00000341316 PSMG1O95456 288 aa20.54■□□□□ 0.88
SPG7-202ENST00000341316 CYP11A1P05108 521 aa20.54■□□□□ 0.88
SPG7-202ENST00000341316 ASGR1P07306 291 aa20.54■□□□□ 0.88
SPG7-202ENST00000341316 KCNA4P22459 653 aa20.54■□□□□ 0.88
SPG7-202ENST00000341316 YY1P25490 414 aa20.54■□□□□ 0.88
SPG7-202ENST00000341316 MRPS35P82673 323 aaKnown RBP20.54■□□□□ 0.88
SPG7-202ENST00000341316 PDE1BQ01064 536 aa20.54■□□□□ 0.88
SPG7-202ENST00000341316 LPIN1Q14693 890 aa20.54■□□□□ 0.88
SPG7-202ENST00000341316 CMC1Q7Z7K0 106 aa20.54■□□□□ 0.88
SPG7-202ENST00000341316 SMC1BQ8NDV3 1235 aa20.54■□□□□ 0.88
SPG7-202ENST00000341316 IRGQQ8WZA9 623 aa20.54■□□□□ 0.88
SPG7-202ENST00000341316 MFSD3Q96ES6 412 aa20.54■□□□□ 0.88
SPG7-202ENST00000341316 ATXN7L3BQ96GX2 97 aa20.54■□□□□ 0.88
SPG7-202ENST00000341316 ADAM2Q99965 735 aa20.54■□□□□ 0.88
SPG7-202ENST00000341316 LRRC40Q9H9A6 602 aa20.54■□□□□ 0.88
SPG7-202ENST00000341316 DMAP1Q9NPF5 467 aaPredicted RBP20.54■□□□□ 0.88
SPG7-202ENST00000341316 MRPL42Q9Y6G3 142 aaKnown RBP20.54■□□□□ 0.88
SPG7-202ENST00000341316 A0A0U1RQF3 1178 aa20.53■□□□□ 0.88
SPG7-202ENST00000341316 GLRA3O75311 464 aa20.53■□□□□ 0.88
SPG7-202ENST00000341316 JCHAINP01591 159 aa20.53■□□□□ 0.88
SPG7-202ENST00000341316 SRGAP2BP0DMP2 458 aa20.53■□□□□ 0.88
SPG7-202ENST00000341316 FGF3P11487 239 aaPredicted RBP20.53■□□□□ 0.88
SPG7-202ENST00000341316 GP5P40197 560 aa20.53■□□□□ 0.88
SPG7-202ENST00000341316 CPA2P48052 419 aa20.53■□□□□ 0.88
SPG7-202ENST00000341316 AQP5P55064 265 aa20.53■□□□□ 0.88
SPG7-202ENST00000341316 STXBP5Q5T5C0 1151 aa20.53■□□□□ 0.88
SPG7-202ENST00000341316 ARHGAP36Q6ZRI8 547 aa20.53■□□□□ 0.88
SPG7-202ENST00000341316 EP400NLQ6ZTU2 488 aa20.53■□□□□ 0.88
SPG7-202ENST00000341316 CRLF3Q8IUI8 442 aa20.53■□□□□ 0.88
SPG7-202ENST00000341316 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.53■□□□□ 0.88
SPG7-202ENST00000341316 ZNF778Q96MU6 729 aa20.53■□□□□ 0.88
SPG7-202ENST00000341316 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.53■□□□□ 0.885e-11■□□□□ 8.8
SPG7-202ENST00000341316 ZNF358Q9NW07 568 aa20.53■□□□□ 0.88
SPG7-202ENST00000341316 M0QZQ0 153 aa20.53■□□□□ 0.88
SPG7-202ENST00000341316 ATP9BO43861 1147 aa20.53■□□□□ 0.88
SPG7-202ENST00000341316 TPH1P17752 444 aa20.53■□□□□ 0.88
SPG7-202ENST00000341316 MX2P20592 715 aa20.53■□□□□ 0.88
SPG7-202ENST00000341316 ABCG1P45844 678 aa20.53■□□□□ 0.88
SPG7-202ENST00000341316 PCLAFQ15004 111 aa20.53■□□□□ 0.88
SPG7-202ENST00000341316 ANKRD20A4Q4UJ75 823 aa20.53■□□□□ 0.88
SPG7-202ENST00000341316 METTL23Q86XA0 190 aa20.53■□□□□ 0.88
SPG7-202ENST00000341316 TREML1Q86YW5 311 aa20.53■□□□□ 0.88
SPG7-202ENST00000341316 CNTD1Q8N815 330 aa20.53■□□□□ 0.88
SPG7-202ENST00000341316 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.53■□□□□ 0.88
SPG7-202ENST00000341316 DTX3LQ8TDB6 740 aa20.53■□□□□ 0.88
SPG7-202ENST00000341316 RSPH1Q8WYR4 309 aa20.53■□□□□ 0.88
SPG7-202ENST00000341316 RNF34Q969K3 372 aa20.53■□□□□ 0.88
SPG7-202ENST00000341316 TEKT5Q96M29 485 aa20.53■□□□□ 0.88
SPG7-202ENST00000341316 SIK2Q9H0K1 926 aa20.53■□□□□ 0.88
SPG7-202ENST00000341316 BFARQ9NZS9 450 aa20.53■□□□□ 0.88
SPG7-202ENST00000341316 TMEM216Q9P0N5 145 aa20.53■□□□□ 0.88
SPG7-202ENST00000341316 IGLV3-25P01717 112 aa20.52■□□□□ 0.88
SPG7-202ENST00000341316 SLC10A3P09131 477 aa20.52■□□□□ 0.88
SPG7-202ENST00000341316 KLC1Q07866 573 aa20.52■□□□□ 0.88
SPG7-202ENST00000341316 EIF4EBP2Q13542 120 aaPredicted RBP20.52■□□□□ 0.88
SPG7-202ENST00000341316 KCNA10Q16322 511 aa20.52■□□□□ 0.88
SPG7-202ENST00000341316 TEDDM1Q5T9Z0 273 aa20.52■□□□□ 0.88
SPG7-202ENST00000341316 MFSD14CQ5VZR4 134 aa20.52■□□□□ 0.88
SPG7-202ENST00000341316 DCLRE1AQ6PJP8 1040 aa20.52■□□□□ 0.88
SPG7-202ENST00000341316 OTOP3Q7RTS5 596 aa20.52■□□□□ 0.88
SPG7-202ENST00000341316 DCLK2Q8N568 766 aa20.52■□□□□ 0.88
SPG7-202ENST00000341316 CFAP61Q8NHU2 1237 aa20.52■□□□□ 0.88
SPG7-202ENST00000341316 ZNF419Q96HQ0 510 aaPredicted RBP20.52■□□□□ 0.88
SPG7-202ENST00000341316 CPNE1Q99829 537 aa20.52■□□□□ 0.88
SPG7-202ENST00000341316 EBF4Q9BQW3 602 aa20.52■□□□□ 0.88
SPG7-202ENST00000341316 BRD8Q9H0E9 1235 aa20.52■□□□□ 0.88
SPG7-202ENST00000341316 CHRAC1Q9NRG0 131 aa20.52■□□□□ 0.88
SPG7-202ENST00000341316 THAP1Q9NVV9 213 aa20.52■□□□□ 0.88
SPG7-202ENST00000341316 TXNDC16Q9P2K2 825 aa20.52■□□□□ 0.88
SPG7-202ENST00000341316 TRHDEQ9UKU6 1024 aa20.52■□□□□ 0.88
SPG7-202ENST00000341316 NUP205Q92621 2012 aa20.52■□□□□ 0.88
SPG7-202ENST00000341316 ARHGAP42A6NI28 874 aa20.52■□□□□ 0.88
SPG7-202ENST00000341316 TBX10O75333 385 aa20.52■□□□□ 0.88
SPG7-202ENST00000341316 PROCP04070 461 aa20.52■□□□□ 0.88
SPG7-202ENST00000341316 TYK2P29597 1187 aa20.52■□□□□ 0.88
SPG7-202ENST00000341316 SERPINB6P35237 376 aa20.52■□□□□ 0.88
SPG7-202ENST00000341316 FLT3LGP49771 235 aa20.52■□□□□ 0.88
SPG7-202ENST00000341316 SLC34A1Q06495 639 aa20.52■□□□□ 0.88
SPG7-202ENST00000341316 ARTNQ5T4W7 220 aa20.52■□□□□ 0.88
SPG7-202ENST00000341316 OVOS1Q6IE37 1185 aa20.52■□□□□ 0.88
SPG7-202ENST00000341316 RWDD4Q6NW29 188 aaKnown RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms