RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 VAT1Q99536 393 aa21.69■■□□□ 1.06
VRK2-201ENST00000340157 FRMD8Q9BZ67 464 aaPredicted RBP21.69■■□□□ 1.06
VRK2-201ENST00000340157 GBA3Q9H227 469 aa21.69■■□□□ 1.06
VRK2-201ENST00000340157 AGO1Q9UL18 857 aaKnown RBP21.69■■□□□ 1.06
VRK2-201ENST00000340157 TLDC2A0PJX2 215 aa21.69■■□□□ 1.06
VRK2-201ENST00000340157 F5H5T6 163 aa21.69■■□□□ 1.06
VRK2-201ENST00000340157 RASGRF2O14827 1237 aa21.69■■□□□ 1.06
VRK2-201ENST00000340157 GREM1O60565 184 aa21.69■■□□□ 1.06
VRK2-201ENST00000340157 TCEA3O75764 348 aa21.69■■□□□ 1.06
VRK2-201ENST00000340157 PEX11BO96011 259 aa21.69■■□□□ 1.06
VRK2-201ENST00000340157 CCNB1P14635 433 aa21.69■■□□□ 1.06
VRK2-201ENST00000340157 SLC11A2P49281 568 aa21.69■■□□□ 1.06
VRK2-201ENST00000340157 ARL14EPQ8N8R7 260 aaPredicted RBP21.69■■□□□ 1.06
VRK2-201ENST00000340157 USP33Q8TEY7 942 aa21.69■■□□□ 1.06
VRK2-201ENST00000340157 AZIN2Q96A70 460 aa21.69■■□□□ 1.06
VRK2-201ENST00000340157 PGM2Q96G03 612 aa21.69■■□□□ 1.06
VRK2-201ENST00000340157 IL12RB2Q99665 862 aa21.69■■□□□ 1.06
VRK2-201ENST00000340157 PLAC1Q9HBJ0 212 aa21.69■■□□□ 1.06
VRK2-201ENST00000340157 TRHDEQ9UKU6 1024 aa21.69■■□□□ 1.06
VRK2-201ENST00000340157 HELZP42694 1942 aaKnown RBP21.68■■□□□ 1.06
VRK2-201ENST00000340157 RASA4BC9J798 803 aa21.68■■□□□ 1.06
VRK2-201ENST00000340157 TRDMT1O14717 391 aaKnown RBP21.68■■□□□ 1.06
VRK2-201ENST00000340157 MATN3O15232 486 aa21.68■■□□□ 1.06
VRK2-201ENST00000340157 RASA4O43374 803 aa21.68■■□□□ 1.06
VRK2-201ENST00000340157 MBL2P11226 248 aaPredicted RBP21.68■■□□□ 1.06
VRK2-201ENST00000340157 NFKB1P19838 968 aa21.68■■□□□ 1.06
VRK2-201ENST00000340157 SGSHP51688 502 aa21.68■■□□□ 1.06
VRK2-201ENST00000340157 OLIG2Q13516 323 aa21.68■■□□□ 1.06
VRK2-201ENST00000340157 PABPC1LQ4VXU2 614 aaKnown RBP21.68■■□□□ 1.06
VRK2-201ENST00000340157 CCDC38Q502W7 563 aa21.68■■□□□ 1.06
VRK2-201ENST00000340157 TNFAIP8L3Q5GJ75 292 aa21.68■■□□□ 1.06
VRK2-201ENST00000340157 TLCD1Q96CP7 247 aa21.68■■□□□ 1.06
VRK2-201ENST00000340157 MLPHQ9BV36 600 aaPredicted RBP21.68■■□□□ 1.06
VRK2-201ENST00000340157 ROPN1BQ9BZX4 212 aaPredicted RBP21.68■■□□□ 1.06
VRK2-201ENST00000340157 VPS37BQ9H9H4 285 aa21.68■■□□□ 1.06
VRK2-201ENST00000340157 ROPN1Q9HAT0 212 aaPredicted RBP21.68■■□□□ 1.06
VRK2-201ENST00000340157 BCCIPQ9P287 314 aaKnown RBP eCLIP21.68■■□□□ 1.06
VRK2-201ENST00000340157 CTNNAL1Q9UBT7 734 aa21.68■■□□□ 1.06
VRK2-201ENST00000340157 RSPH14Q9UHP6 348 aa21.68■■□□□ 1.06
VRK2-201ENST00000340157 IPO11Q9UI26 975 aaKnown RBP21.68■■□□□ 1.06
VRK2-201ENST00000340157 ADAM21Q9UKJ8 722 aa21.68■■□□□ 1.06
VRK2-201ENST00000340157 A0A087WUV0 522 aaPredicted RBP21.67■■□□□ 1.06
VRK2-201ENST00000340157 H3BNC9 293 aa21.67■■□□□ 1.06
VRK2-201ENST00000340157 CCL16O15467 120 aa21.67■■□□□ 1.06
VRK2-201ENST00000340157 CACNG3O60359 315 aa21.67■■□□□ 1.06
VRK2-201ENST00000340157 GCAP28676 217 aa21.67■■□□□ 1.06
VRK2-201ENST00000340157 MAGEA10P43363 369 aaPredicted RBP21.67■■□□□ 1.06
VRK2-201ENST00000340157 RPS24P62847 133 aaKnown RBP21.67■■□□□ 1.06
VRK2-201ENST00000340157 CDK16Q00536 496 aa21.67■■□□□ 1.06
VRK2-201ENST00000340157 KCTD11Q693B1 232 aa21.67■■□□□ 1.06
VRK2-201ENST00000340157 MPP5Q8N3R9 675 aa21.67■■□□□ 1.06
VRK2-201ENST00000340157 ATP11CQ8NB49 1132 aa21.67■■□□□ 1.06
VRK2-201ENST00000340157 MAML1Q92585 1016 aa21.67■■□□□ 1.06
VRK2-201ENST00000340157 HCFC1R1Q9NWW0 138 aa21.67■■□□□ 1.06
VRK2-201ENST00000340157 NOVA2Q9UNW9 492 aaKnown RBP21.67■■□□□ 1.06
VRK2-201ENST00000340157 RB1P06400 928 aa21.66■■□□□ 1.06
VRK2-201ENST00000340157 GJA1P17302 382 aa21.66■■□□□ 1.06
VRK2-201ENST00000340157 SPARCL1Q14515 664 aa21.66■■□□□ 1.06
VRK2-201ENST00000340157 STXBP5Q5T5C0 1151 aa21.66■■□□□ 1.06
VRK2-201ENST00000340157 OTOP3Q7RTS5 596 aa21.66■■□□□ 1.06
VRK2-201ENST00000340157 SIGLEC10Q96LC7 697 aa21.66■■□□□ 1.06
VRK2-201ENST00000340157 EURLQ9NYK6 297 aa21.66■■□□□ 1.06
VRK2-201ENST00000340157 ZFP37Q9Y6Q3 630 aaPredicted RBP21.66■■□□□ 1.06
VRK2-201ENST00000340157 ARHGAP42A6NI28 874 aa21.66■■□□□ 1.06
VRK2-201ENST00000340157 J3KR12 359 aa21.66■■□□□ 1.06
VRK2-201ENST00000340157 SCAMP3O14828 347 aaKnown RBP21.66■■□□□ 1.06
VRK2-201ENST00000340157 RFPL2O75678 378 aa21.66■■□□□ 1.06
VRK2-201ENST00000340157 HDCP19113 662 aa21.66■■□□□ 1.06
VRK2-201ENST00000340157 OR1E1P30953 314 aa21.66■■□□□ 1.06
VRK2-201ENST00000340157 CCR2P41597 374 aa21.66■■□□□ 1.06
VRK2-201ENST00000340157 MAPKAPK2P49137 400 aa21.66■■□□□ 1.06
VRK2-201ENST00000340157 SMAD3P84022 425 aaKnown RBP21.66■■□□□ 1.06
VRK2-201ENST00000340157 STAT4Q14765 748 aa21.66■■□□□ 1.06
VRK2-201ENST00000340157 C6orf118Q5T5N4 469 aa21.66■■□□□ 1.06
VRK2-201ENST00000340157 LRRC49Q8IUZ0 686 aa21.66■■□□□ 1.06
VRK2-201ENST00000340157 KLHDC8BQ8IXV7 354 aa21.66■■□□□ 1.06
VRK2-201ENST00000340157 OR52K2Q8NGK3 314 aa21.66■■□□□ 1.06
VRK2-201ENST00000340157 FAM76AQ8TAV0 307 aa21.66■■□□□ 1.06
VRK2-201ENST00000340157 MICAL1Q8TDZ2 1067 aa21.66■■□□□ 1.06
VRK2-201ENST00000340157 XAB2Q9HCS7 855 aaKnown RBP21.66■■□□□ 1.06
VRK2-201ENST00000340157 MAN1C1Q9NR34 630 aa21.66■■□□□ 1.06
VRK2-201ENST00000340157 PIH1D1Q9NWS0 290 aaKnown RBP21.66■■□□□ 1.06
VRK2-201ENST00000340157 RABGEF1Q9UJ41 708 aa21.66■■□□□ 1.06
VRK2-201ENST00000340157 STOML2Q9UJZ1 356 aa21.66■■□□□ 1.06
VRK2-201ENST00000340157 YBX2Q9Y2T7 364 aaKnown RBP21.66■■□□□ 1.06
VRK2-201ENST00000340157 CPQQ9Y646 472 aa21.66■■□□□ 1.06
VRK2-201ENST00000340157 A0A1W2PRU2 124 aa21.65■■□□□ 1.06
VRK2-201ENST00000340157 EPCAMP16422 314 aa21.65■■□□□ 1.06
VRK2-201ENST00000340157 LMAN1P49257 510 aa21.65■■□□□ 1.06
VRK2-201ENST00000340157 SKIDA1Q1XH10 827 aa21.65■■□□□ 1.06
VRK2-201ENST00000340157 DNAJC21Q5F1R6 531 aaKnown RBP21.65■■□□□ 1.06
VRK2-201ENST00000340157 ADGRF1Q5T601 910 aa21.65■■□□□ 1.06
VRK2-201ENST00000340157 ITPRIPL1Q6GPH6 555 aa21.65■■□□□ 1.06
VRK2-201ENST00000340157 TIGD7Q6NT04 549 aaPredicted RBP21.65■■□□□ 1.06
VRK2-201ENST00000340157 LRRC8BQ6P9F7 803 aa21.65■■□□□ 1.06
VRK2-201ENST00000340157 C3orf62Q6ZUJ4 267 aa21.65■■□□□ 1.06
VRK2-201ENST00000340157 MAB21L3Q8N8X9 362 aa21.65■■□□□ 1.06
VRK2-201ENST00000340157 OXNAD1Q96HP4 312 aaPredicted RBP21.65■■□□□ 1.06
VRK2-201ENST00000340157 CORO1BQ9BR76 489 aa21.65■■□□□ 1.06
VRK2-201ENST00000340157 TRIM56Q9BRZ2 755 aaKnown RBP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms