RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 ADAM23O75077 832 aa17.15■□□□□ 0.34
SFN-201ENST00000339276 ATG13O75143 517 aa17.15■□□□□ 0.34
SFN-201ENST00000339276 PALMO75781 387 aa17.15■□□□□ 0.34
SFN-201ENST00000339276 KRT1P04264 644 aa17.15■□□□□ 0.34
SFN-201ENST00000339276 ATP5BP06576 529 aaKnown RBP17.15■□□□□ 0.34
SFN-201ENST00000339276 DLDP09622 509 aaKnown RBP17.15■□□□□ 0.34
SFN-201ENST00000339276 AMPD1P23109 780 aa17.15■□□□□ 0.34
SFN-201ENST00000339276 IL4RP24394 825 aa17.15■□□□□ 0.34
SFN-201ENST00000339276 ACVRL1P37023 503 aa17.15■□□□□ 0.34
SFN-201ENST00000339276 IL12RB1P42701 662 aa17.15■□□□□ 0.34
SFN-201ENST00000339276 SATB1Q01826 763 aa17.15■□□□□ 0.34
SFN-201ENST00000339276 PDK2Q15119 407 aa17.15■□□□□ 0.34
SFN-201ENST00000339276 ZNF783Q6ZMS7 281 aa17.15■□□□□ 0.34
SFN-201ENST00000339276 ZNF662Q6ZS27 426 aa17.15■□□□□ 0.34
SFN-201ENST00000339276 CHPFQ8IZ52 775 aa17.15■□□□□ 0.34
SFN-201ENST00000339276 KIAA1524Q8TCG1 905 aa17.15■□□□□ 0.34
SFN-201ENST00000339276 KCNV2Q8TDN2 545 aa17.15■□□□□ 0.34
SFN-201ENST00000339276 ACDQ96AP0 544 aa17.15■□□□□ 0.34
SFN-201ENST00000339276 ETNK2Q9NVF9 386 aa17.15■□□□□ 0.34
SFN-201ENST00000339276 RCOR3Q9P2K3 495 aaPredicted RBP17.15■□□□□ 0.34
SFN-201ENST00000339276 MMP17Q9ULZ9 603 aa17.15■□□□□ 0.34
SFN-201ENST00000339276 MFHAS1Q9Y4C4 1052 aa17.15■□□□□ 0.34
SFN-201ENST00000339276 WASH3PC4AMC7 463 aa17.14■□□□□ 0.33
SFN-201ENST00000339276 DCLK1O15075 740 aa17.14■□□□□ 0.33
SFN-201ENST00000339276 ASLP04424 464 aa17.14■□□□□ 0.33
SFN-201ENST00000339276 GLDCP23378 1020 aa17.14■□□□□ 0.33
SFN-201ENST00000339276 KDELR1P24390 212 aa17.14■□□□□ 0.33
SFN-201ENST00000339276 PRKCHP24723 683 aa17.14■□□□□ 0.33
SFN-201ENST00000339276 NTSR1P30989 418 aa17.14■□□□□ 0.33
SFN-201ENST00000339276 STK19P49842 368 aaPredicted RBP17.14■□□□□ 0.33
SFN-201ENST00000339276 ECT2LQ008S8 904 aa17.14■□□□□ 0.33
SFN-201ENST00000339276 HSF5Q4G112 596 aaPredicted RBP17.14■□□□□ 0.33
SFN-201ENST00000339276 FNDC3BQ53EP0 1204 aaKnown RBP17.14■□□□□ 0.33
SFN-201ENST00000339276 TRMT11Q7Z4G4 463 aaKnown RBP17.14■□□□□ 0.33
SFN-201ENST00000339276 UMODL1-AS1Q8N2C9 162 aa17.14■□□□□ 0.33
SFN-201ENST00000339276 RNF10Q8N5U6 811 aaKnown RBP17.14■□□□□ 0.33
SFN-201ENST00000339276 NPWQ8N729 165 aa17.14■□□□□ 0.33
SFN-201ENST00000339276 DCAF4L2Q8NA75 395 aa17.14■□□□□ 0.33
SFN-201ENST00000339276 NETO2Q8NC67 525 aa17.14■□□□□ 0.33
SFN-201ENST00000339276 KRT35Q92764 455 aa17.14■□□□□ 0.33
SFN-201ENST00000339276 ARHGEF2Q92974 986 aaKnown RBP17.14■□□□□ 0.33
SFN-201ENST00000339276 ERLEC1Q96DZ1 483 aa17.14■□□□□ 0.33
SFN-201ENST00000339276 MYO19Q96H55 970 aa17.14■□□□□ 0.33
SFN-201ENST00000339276 CELF6Q96J87 481 aaKnown RBP17.14■□□□□ 0.33
SFN-201ENST00000339276 RPL10LQ96L21 214 aaKnown RBP17.14■□□□□ 0.33
SFN-201ENST00000339276 MRGPRX3Q96LB0 322 aa17.14■□□□□ 0.33
SFN-201ENST00000339276 ZNF670Q9BS34 389 aa17.14■□□□□ 0.33
SFN-201ENST00000339276 SPON2Q9BUD6 331 aa17.14■□□□□ 0.33
SFN-201ENST00000339276 KLC2Q9H0B6 622 aa17.14■□□□□ 0.33
SFN-201ENST00000339276 ATP13A1Q9HD20 1204 aa17.14■□□□□ 0.33
SFN-201ENST00000339276 DDX56Q9NY93 547 aaKnown RBP17.14■□□□□ 0.33
SFN-201ENST00000339276 VPS51Q9UID3 782 aa17.14■□□□□ 0.33
SFN-201ENST00000339276 ERVW-1Q9UQF0 538 aa17.14■□□□□ 0.33
SFN-201ENST00000339276 STON1Q9Y6Q2 735 aa17.14■□□□□ 0.33
SFN-201ENST00000339276 C3orf70A6NLC5 250 aaPredicted RBP17.13■□□□□ 0.33
SFN-201ENST00000339276 RASA4BC9J798 803 aa17.13■□□□□ 0.33
SFN-201ENST00000339276 RASA4O43374 803 aa17.13■□□□□ 0.33
SFN-201ENST00000339276 FTCDO95954 541 aa17.13■□□□□ 0.33
SFN-201ENST00000339276 HLA-EP13747 358 aa17.13■□□□□ 0.33
SFN-201ENST00000339276 HOXB2P14652 356 aa17.13■□□□□ 0.33
SFN-201ENST00000339276 CCR3P51677 355 aa17.13■□□□□ 0.33
SFN-201ENST00000339276 ENPP2Q13822 863 aa17.13■□□□□ 0.33
SFN-201ENST00000339276 POLD3Q15054 466 aaPredicted RBP17.13■□□□□ 0.33
SFN-201ENST00000339276 ANKRD20A8PQ5CZ79 823 aa17.13■□□□□ 0.33
SFN-201ENST00000339276 EOGTQ5NDL2 527 aa17.13■□□□□ 0.33
SFN-201ENST00000339276 IL31Q6EBC2 164 aa17.13■□□□□ 0.33
SFN-201ENST00000339276 SERPINA13PQ6UXR4 307 aa17.13■□□□□ 0.33
SFN-201ENST00000339276 TMEM92Q6UXU6 159 aa17.13■□□□□ 0.33
SFN-201ENST00000339276 SYT13Q7L8C5 426 aa17.13■□□□□ 0.33
SFN-201ENST00000339276 NT5DC3Q86UY8 548 aa17.13■□□□□ 0.33
SFN-201ENST00000339276 C1orf210Q8IVY1 113 aa17.13■□□□□ 0.33
SFN-201ENST00000339276 MAP7D3Q8IWC1 876 aa17.13■□□□□ 0.33
SFN-201ENST00000339276 ZNF366Q8N895 744 aa17.13■□□□□ 0.33
SFN-201ENST00000339276 RNF25Q96BH1 459 aaPredicted RBP17.13■□□□□ 0.33
SFN-201ENST00000339276 FAF2Q96CS3 445 aa17.13■□□□□ 0.33
SFN-201ENST00000339276 HMCESQ96FZ2 354 aa17.13■□□□□ 0.33
SFN-201ENST00000339276 C2orf49Q9BVC5 232 aaPredicted RBP17.13■□□□□ 0.33
SFN-201ENST00000339276 MAGEH1Q9H213 219 aa17.13■□□□□ 0.33
SFN-201ENST00000339276 LRRC19Q9H756 370 aa17.13■□□□□ 0.33
SFN-201ENST00000339276 PLA2G4CQ9UP65 541 aa17.13■□□□□ 0.33
SFN-201ENST00000339276 RAD54BQ9Y620 910 aa17.13■□□□□ 0.33
SFN-201ENST00000339276 NYNRINQ9P2P1 1898 aaKnown RBP17.12■□□□□ 0.33
SFN-201ENST00000339276 CBX4O00257 560 aa17.12■□□□□ 0.33
SFN-201ENST00000339276 NPC1O15118 1278 aa17.12■□□□□ 0.33
SFN-201ENST00000339276 LAMTOR5O43504 91 aa17.12■□□□□ 0.33
SFN-201ENST00000339276 COL9A1P20849 921 aa17.12■□□□□ 0.33
SFN-201ENST00000339276 CTNNA2P26232 953 aa17.12■□□□□ 0.33
SFN-201ENST00000339276 CTNNA1P35221 906 aaKnown RBP17.12■□□□□ 0.33
SFN-201ENST00000339276 ETFBP38117 255 aa17.12■□□□□ 0.33
SFN-201ENST00000339276 CXCL12P48061 93 aa17.12■□□□□ 0.33
SFN-201ENST00000339276 SULT2A1Q06520 285 aa17.12■□□□□ 0.33
SFN-201ENST00000339276 CRY1Q16526 586 aa17.12■□□□□ 0.33
SFN-201ENST00000339276 SDE2Q6IQ49 451 aa17.12■□□□□ 0.33
SFN-201ENST00000339276 TSSK4Q6SA08 328 aa17.12■□□□□ 0.33
SFN-201ENST00000339276 TMCO3Q6UWJ1 677 aa17.12■□□□□ 0.33
SFN-201ENST00000339276 LINGO4Q6UY18 593 aa17.12■□□□□ 0.33
SFN-201ENST00000339276 MAMSTRQ6ZN01 415 aa17.12■□□□□ 0.33
SFN-201ENST00000339276 TP53INP2Q8IXH6 220 aa17.12■□□□□ 0.33
SFN-201ENST00000339276 MAML2Q8IZL2 1156 aaPredicted RBP17.12■□□□□ 0.33
SFN-201ENST00000339276 SYCE1Q8N0S2 351 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms