RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 IPO11Q9UI26 975 aaKnown RBP15.04■□□□□ -0
CBX3-201ENST00000337620 STOML2Q9UJZ1 356 aa15.04■□□□□ -0
CBX3-201ENST00000337620 PDE4DIPQ5VU43 2346 aa15.04■□□□□ -0
CBX3-201ENST00000337620 CHADO15335 359 aa15.04■□□□□ -0
CBX3-201ENST00000337620 CCNB1P14635 433 aa15.04■□□□□ -0
CBX3-201ENST00000337620 KCNJ11Q14654 390 aa15.04■□□□□ -0
CBX3-201ENST00000337620 TEX44Q53QW1 395 aa15.04■□□□□ -0
CBX3-201ENST00000337620 LRRC49Q8IUZ0 686 aa15.04■□□□□ -0
CBX3-201ENST00000337620 VN1R2Q8NFZ6 395 aa15.04■□□□□ -0
CBX3-201ENST00000337620 SH3RF2Q8TEC5 729 aa15.04■□□□□ -0
CBX3-201ENST00000337620 ING5Q8WYH8 240 aa15.04■□□□□ -0
CBX3-201ENST00000337620 FOXP3Q9BZS1 431 aa15.04■□□□□ -0
CBX3-201ENST00000337620 ACBD3Q9H3P7 528 aa15.04■□□□□ -0
CBX3-201ENST00000337620 CCL26Q9Y258 94 aa15.04■□□□□ -0
CBX3-201ENST00000337620 ATG2AQ2TAZ0 1938 aa15.03■□□□□ -0
CBX3-201ENST00000337620 GOLGA6BA6NDN3 693 aa15.03■□□□□ -0
CBX3-201ENST00000337620 SMAPO00193 183 aa15.03■□□□□ -0
CBX3-201ENST00000337620 ZNF197O14709 1029 aa15.03■□□□□ -0
CBX3-201ENST00000337620 MATN3O15232 486 aa15.03■□□□□ -0
CBX3-201ENST00000337620 ZBTB24O43167 697 aaPredicted RBP15.03■□□□□ -0
CBX3-201ENST00000337620 CLDN11O75508 207 aa15.03■□□□□ -0
CBX3-201ENST00000337620 PSMB4P28070 264 aa15.03■□□□□ -0
CBX3-201ENST00000337620 FDFT1P37268 417 aa15.03■□□□□ -0
CBX3-201ENST00000337620 LMAN1P49257 510 aa15.03■□□□□ -0
CBX3-201ENST00000337620 HIF1AQ16665 826 aa15.03■□□□□ -0
CBX3-201ENST00000337620 PRSS36Q5K4E3 855 aa15.03■□□□□ -0
CBX3-201ENST00000337620 TIGD7Q6NT04 549 aaPredicted RBP15.03■□□□□ -0
CBX3-201ENST00000337620 HTR3DQ70Z44 454 aa15.03■□□□□ -0
CBX3-201ENST00000337620 PPP2R3CQ969Q6 453 aa15.03■□□□□ -0
CBX3-201ENST00000337620 SAYSD1Q9NPB0 183 aa15.03■□□□□ -0
CBX3-201ENST00000337620 ARHGAP26Q9UNA1 814 aa15.03■□□□□ -0
CBX3-201ENST00000337620 ZNF510Q9Y2H8 683 aa15.03■□□□□ -0
CBX3-201ENST00000337620 MRPS23Q9Y3D9 190 aaKnown RBP15.03■□□□□ -0
CBX3-201ENST00000337620 MYO18AQ92614 2054 aaKnown RBP15.03■□□□□ -0
CBX3-201ENST00000337620 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.02■□□□□ -0
CBX3-201ENST00000337620 TBL1XO60907 577 aa15.02■□□□□ -0
CBX3-201ENST00000337620 ACVRL1P37023 503 aa15.02■□□□□ -0
CBX3-201ENST00000337620 ARL4CP56559 192 aa15.02■□□□□ -0
CBX3-201ENST00000337620 ZNF177Q13360 481 aaPredicted RBP15.02■□□□□ -0
CBX3-201ENST00000337620 MTM1Q13496 603 aa15.02■□□□□ -0
CBX3-201ENST00000337620 CBX2Q14781 532 aaPredicted RBP15.02■□□□□ -0
CBX3-201ENST00000337620 PARP6Q2NL67 630 aa15.02■□□□□ -0
CBX3-201ENST00000337620 PARP15Q460N3 678 aa15.02■□□□□ -0
CBX3-201ENST00000337620 HP1BP3Q5SSJ5 553 aaPredicted RBP15.02■□□□□ -0
CBX3-201ENST00000337620 ALS2CLQ60I27 953 aa15.02■□□□□ -0
CBX3-201ENST00000337620 CENPUQ71F23 418 aa15.02■□□□□ -0
CBX3-201ENST00000337620 BBS7Q8IWZ6 715 aa15.02■□□□□ -0
CBX3-201ENST00000337620 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.02■□□□□ -0
CBX3-201ENST00000337620 BHMTQ93088 406 aa15.02■□□□□ -0
CBX3-201ENST00000337620 EXOC4Q96A65 974 aa15.02■□□□□ -0
CBX3-201ENST00000337620 TMA16Q96EY4 203 aaKnown RBP15.02■□□□□ -0
CBX3-201ENST00000337620 ZIM3Q96PE6 472 aa15.02■□□□□ -0
CBX3-201ENST00000337620 VAT1Q99536 393 aa15.02■□□□□ -0
CBX3-201ENST00000337620 CDCA3Q99618 268 aaPredicted RBP15.02■□□□□ -0
CBX3-201ENST00000337620 PABPC3Q9H361 631 aaKnown RBP15.02■□□□□ -0
CBX3-201ENST00000337620 CDC42EP4Q9H3Q1 356 aaKnown RBP15.02■□□□□ -0
CBX3-201ENST00000337620 RSPH14Q9UHP6 348 aa15.02■□□□□ -0
CBX3-201ENST00000337620 TRHDEQ9UKU6 1024 aa15.02■□□□□ -0
CBX3-201ENST00000337620 PLAAQ9Y263 795 aa15.02■□□□□ -0
CBX3-201ENST00000337620 TTLL3Q9Y4R7 772 aa15.02■□□□□ -0
CBX3-201ENST00000337620 NOTCH4Q99466 2003 aa15.02■□□□□ -0
CBX3-201ENST00000337620 NYNRINQ9P2P1 1898 aaKnown RBP15.02□□□□□ -0.01
CBX3-201ENST00000337620 A0A1B0GVM2 712 aa15.02□□□□□ -0.01
CBX3-201ENST00000337620 TCAF2A6NFQ2 919 aa15.02□□□□□ -0.01
CBX3-201ENST00000337620 J3KR12 359 aa15.02□□□□□ -0.01
CBX3-201ENST00000337620 NEBLO76041 1014 aa15.02□□□□□ -0.01
CBX3-201ENST00000337620 POU2F2P09086 479 aa15.02□□□□□ -0.01
CBX3-201ENST00000337620 CEBPBP17676 345 aa15.02□□□□□ -0.01
CBX3-201ENST00000337620 YBEYP58557 167 aaPredicted RBP15.02□□□□□ -0.01
CBX3-201ENST00000337620 SEMA5AQ13591 1074 aa15.02□□□□□ -0.01
CBX3-201ENST00000337620 FNBP1LQ5T0N5 605 aa15.02□□□□□ -0.01
CBX3-201ENST00000337620 C6orf118Q5T5N4 469 aa15.02□□□□□ -0.01
CBX3-201ENST00000337620 CHRDL2Q6WN34 429 aa15.02□□□□□ -0.01
CBX3-201ENST00000337620 CEP128Q6ZU80 1094 aa15.02□□□□□ -0.01
CBX3-201ENST00000337620 IQCKQ8N0W5 287 aa15.02□□□□□ -0.01
CBX3-201ENST00000337620 ZSCAN18Q8TBC5 510 aaPredicted RBP15.02□□□□□ -0.01
CBX3-201ENST00000337620 USP13Q92995 863 aaPredicted RBP15.02□□□□□ -0.01
CBX3-201ENST00000337620 TEKT5Q96M29 485 aa15.02□□□□□ -0.01
CBX3-201ENST00000337620 ZSWIM3Q96MP5 696 aa15.02□□□□□ -0.01
CBX3-201ENST00000337620 RUFY1Q96T51 708 aa15.02□□□□□ -0.01
CBX3-201ENST00000337620 APOL5Q9BWW9 433 aa15.02□□□□□ -0.01
CBX3-201ENST00000337620 RETREG1Q9H6L5 497 aa15.02□□□□□ -0.01
CBX3-201ENST00000337620 SFXN1Q9H9B4 322 aa15.02□□□□□ -0.01
CBX3-201ENST00000337620 SP110Q9HB58 689 aa15.02□□□□□ -0.01
CBX3-201ENST00000337620 TDP1Q9NUW8 608 aa15.02□□□□□ -0.01
CBX3-201ENST00000337620 A0A0D9SEW6 157 aa15.01□□□□□ -0.01
CBX3-201ENST00000337620 TYW5A2RUC4 315 aaKnown RBP15.01□□□□□ -0.01
CBX3-201ENST00000337620 BANF1O75531 89 aa15.01□□□□□ -0.01
CBX3-201ENST00000337620 MAGEA4P43358 317 aa15.01□□□□□ -0.01
CBX3-201ENST00000337620 PDIA2Q13087 525 aaKnown RBP15.01□□□□□ -0.01
CBX3-201ENST00000337620 SERINC3Q13530 473 aa15.01□□□□□ -0.01
CBX3-201ENST00000337620 KCNC3Q14003 757 aa15.01□□□□□ -0.01
CBX3-201ENST00000337620 KYNUQ16719 465 aa15.01□□□□□ -0.01
CBX3-201ENST00000337620 RARS2Q5T160 578 aaKnown RBP15.01□□□□□ -0.01
CBX3-201ENST00000337620 UBAP2Q5T6F2 1119 aaKnown RBP15.01□□□□□ -0.01
CBX3-201ENST00000337620 TTC39BQ5VTQ0 682 aaPredicted RBP15.01□□□□□ -0.01
CBX3-201ENST00000337620 ITPRIPL1Q6GPH6 555 aa15.01□□□□□ -0.01
CBX3-201ENST00000337620 TRMT10CQ7L0Y3 403 aaKnown RBP15.01□□□□□ -0.01
CBX3-201ENST00000337620 CHST9Q7L1S5 443 aa15.01□□□□□ -0.01
CBX3-201ENST00000337620 PDIK1LQ8N165 341 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms