RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 PRPF39Q86UA1 669 aaKnown RBP10.98□□□□□ -0.65
CAPN3-202ENST00000337571 ZDHHC17Q8IUH5 632 aa10.98□□□□□ -0.65
CAPN3-202ENST00000337571 GALNT15Q8N3T1 639 aa10.98□□□□□ -0.65
CAPN3-202ENST00000337571 PTPRN2Q92932 1015 aa10.98□□□□□ -0.65
CAPN3-202ENST00000337571 SLC2A13Q96QE2 648 aa10.98□□□□□ -0.65
CAPN3-202ENST00000337571 SPAG5Q96R06 1193 aa10.98□□□□□ -0.65
CAPN3-202ENST00000337571 FAM129BQ96TA1 746 aa10.98□□□□□ -0.65
CAPN3-202ENST00000337571 PRMT1Q99873 361 aaKnown RBP10.98□□□□□ -0.65
CAPN3-202ENST00000337571 SIK2Q9H0K1 926 aa10.98□□□□□ -0.65
CAPN3-202ENST00000337571 WDCPQ9H6R7 721 aa10.98□□□□□ -0.65
CAPN3-202ENST00000337571 TMEM51Q9NW97 253 aa10.98□□□□□ -0.65
CAPN3-202ENST00000337571 RRN3Q9NYV6 651 aa10.98□□□□□ -0.65
CAPN3-202ENST00000337571 ADAMTS1Q9UHI8 967 aa10.98□□□□□ -0.65
CAPN3-202ENST00000337571 VANGL2Q9ULK5 521 aa10.98□□□□□ -0.65
CAPN3-202ENST00000337571 ITIH6Q6UXX5 1313 aa10.98□□□□□ -0.65
CAPN3-202ENST00000337571 NBEAQ8NFP9 2946 aa10.97□□□□□ -0.65
CAPN3-202ENST00000337571 H0Y8X5 98 aa10.97□□□□□ -0.65
CAPN3-202ENST00000337571 FOXN3O00409 490 aaPredicted RBP10.97□□□□□ -0.65
CAPN3-202ENST00000337571 TNFSF14O43557 240 aa10.97□□□□□ -0.65
CAPN3-202ENST00000337571 PCDHGA12O60330 932 aa10.97□□□□□ -0.65
CAPN3-202ENST00000337571 CLDN11O75508 207 aa10.97□□□□□ -0.65
CAPN3-202ENST00000337571 F9P00740 461 aa10.97□□□□□ -0.65
CAPN3-202ENST00000337571 ITGAVP06756 1048 aa10.97□□□□□ -0.65
CAPN3-202ENST00000337571 ATXN1LP0C7T5 689 aaKnown RBP10.97□□□□□ -0.65
CAPN3-202ENST00000337571 MZF1P28698 734 aaPredicted RBP10.97□□□□□ -0.65
CAPN3-202ENST00000337571 CTSKP43235 329 aa10.97□□□□□ -0.65
CAPN3-202ENST00000337571 NUMBP49757 651 aa10.97□□□□□ -0.65
CAPN3-202ENST00000337571 STK19P49842 368 aaPredicted RBP10.97□□□□□ -0.65
CAPN3-202ENST00000337571 CCR5P51681 352 aa10.97□□□□□ -0.65
CAPN3-202ENST00000337571 RNASE9P60153 205 aaKnown RBP10.97□□□□□ -0.65
CAPN3-202ENST00000337571 PITX1P78337 314 aaPredicted RBP10.97□□□□□ -0.65
CAPN3-202ENST00000337571 KRT83P78385 493 aa10.97□□□□□ -0.65
CAPN3-202ENST00000337571 APBA1Q02410 837 aa10.97□□□□□ -0.65
CAPN3-202ENST00000337571 CCDC15Q0P6D6 951 aa10.97□□□□□ -0.65
CAPN3-202ENST00000337571 SCAPQ12770 1279 aa10.97□□□□□ -0.65
CAPN3-202ENST00000337571 EIF4EBP2Q13542 120 aaPredicted RBP10.97□□□□□ -0.65
CAPN3-202ENST00000337571 VWA3BQ502W6 1294 aa10.97□□□□□ -0.65
CAPN3-202ENST00000337571 CCDC157Q569K6 752 aa10.97□□□□□ -0.65
CAPN3-202ENST00000337571 LAYNQ6UX15 382 aa10.97□□□□□ -0.65
CAPN3-202ENST00000337571 LRRC31Q6UY01 552 aa10.97□□□□□ -0.65
CAPN3-202ENST00000337571 CCNI2Q6ZMN8 369 aaPredicted RBP10.97□□□□□ -0.65
CAPN3-202ENST00000337571 SLC47A2Q86VL8 602 aa10.97□□□□□ -0.65
CAPN3-202ENST00000337571 CIR1Q86X95 450 aaPredicted RBP10.97□□□□□ -0.65
CAPN3-202ENST00000337571 IRF2BP1Q8IU81 584 aa10.97□□□□□ -0.65
CAPN3-202ENST00000337571 TMEM35BQ8NCS4 154 aa10.97□□□□□ -0.65
CAPN3-202ENST00000337571 MSANTD4Q8NCY6 345 aa10.97□□□□□ -0.65
CAPN3-202ENST00000337571 C1orf131Q8NDD1 294 aaKnown RBP10.97□□□□□ -0.65
CAPN3-202ENST00000337571 OR8D1Q8WZ84 308 aa10.97□□□□□ -0.65
CAPN3-202ENST00000337571 SERAC1Q96JX3 654 aa10.97□□□□□ -0.65
CAPN3-202ENST00000337571 SLC6A18Q96N87 628 aa10.97□□□□□ -0.65
CAPN3-202ENST00000337571 FEM1AQ9BSK4 669 aa10.97□□□□□ -0.65
CAPN3-202ENST00000337571 MUC3BQ9H195 1237 aa10.97□□□□□ -0.65
CAPN3-202ENST00000337571 KDM4CQ9H3R0 1056 aa10.97□□□□□ -0.65
CAPN3-202ENST00000337571 NDST4Q9H3R1 872 aa10.97□□□□□ -0.65
CAPN3-202ENST00000337571 CCDC86Q9H6F5 360 aaKnown RBP10.97□□□□□ -0.65
CAPN3-202ENST00000337571 GDF3Q9NR23 364 aa10.97□□□□□ -0.65
CAPN3-202ENST00000337571 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.97□□□□□ -0.65
CAPN3-202ENST00000337571 FTSJ1Q9UET6 329 aa10.97□□□□□ -0.65
CAPN3-202ENST00000337571 SERGEFQ9UGK8 458 aa10.97□□□□□ -0.65
CAPN3-202ENST00000337571 VPS28Q9UK41 221 aa10.97□□□□□ -0.65
CAPN3-202ENST00000337571 STAP1Q9ULZ2 295 aa10.97□□□□□ -0.65
CAPN3-202ENST00000337571 SLCO1B1Q9Y6L6 691 aa10.97□□□□□ -0.65
CAPN3-202ENST00000337571 NUMA1Q14980 2115 aa10.97□□□□□ -0.65
CAPN3-202ENST00000337571 FREM2Q5SZK8 3169 aa10.97□□□□□ -0.65
CAPN3-202ENST00000337571 PLXNA2O75051 1894 aa10.96□□□□□ -0.65
CAPN3-202ENST00000337571 C1QTNF3-AMACRE9PGA6 284 aa10.96□□□□□ -0.65
CAPN3-202ENST00000337571 BNIP3LO60238 219 aa10.96□□□□□ -0.65
CAPN3-202ENST00000337571 MAGEC1O60732 1142 aa10.96□□□□□ -0.65
CAPN3-202ENST00000337571 PAGE1O75459 146 aa10.96□□□□□ -0.65
CAPN3-202ENST00000337571 ERBB2P04626 1255 aa10.96□□□□□ -0.65
CAPN3-202ENST00000337571 CLCN1P35523 988 aa10.96□□□□□ -0.65
CAPN3-202ENST00000337571 NUDT1P36639 197 aa10.96□□□□□ -0.65
CAPN3-202ENST00000337571 ARRB1P49407 418 aaPredicted RBP10.96□□□□□ -0.65
CAPN3-202ENST00000337571 ADPRHP54922 357 aa10.96□□□□□ -0.65
CAPN3-202ENST00000337571 CDH4P55283 916 aa10.96□□□□□ -0.65
CAPN3-202ENST00000337571 IL9RQ01113 521 aa10.96□□□□□ -0.65
CAPN3-202ENST00000337571 RAPGEF1Q13905 1077 aa10.96□□□□□ -0.65
CAPN3-202ENST00000337571 DLG2Q15700 870 aa10.96□□□□□ -0.65
CAPN3-202ENST00000337571 ACBD5Q5T8D3 534 aaPredicted RBP10.96□□□□□ -0.65
CAPN3-202ENST00000337571 OLFML1Q6UWY5 402 aa10.96□□□□□ -0.65
CAPN3-202ENST00000337571 SLC26A9Q7LBE3 791 aa10.96□□□□□ -0.65
CAPN3-202ENST00000337571 TMPRSS7Q7RTY8 843 aa10.96□□□□□ -0.65
CAPN3-202ENST00000337571 ERICH1Q86X53 443 aa10.96□□□□□ -0.65
CAPN3-202ENST00000337571 AADATQ8N5Z0 425 aa10.96□□□□□ -0.65
CAPN3-202ENST00000337571 BAHD1Q8TBE0 780 aaPredicted RBP10.96□□□□□ -0.65
CAPN3-202ENST00000337571 C18orf8Q96DM3 657 aa10.96□□□□□ -0.65
CAPN3-202ENST00000337571 CCDC114Q96M63 670 aa10.96□□□□□ -0.65
CAPN3-202ENST00000337571 ELF4Q99607 663 aaPredicted RBP10.96□□□□□ -0.65
CAPN3-202ENST00000337571 TUBGCP2Q9BSJ2 902 aa10.96□□□□□ -0.65
CAPN3-202ENST00000337571 PLCB1Q9NQ66 1216 aa10.96□□□□□ -0.65
CAPN3-202ENST00000337571 CHMP5Q9NZZ3 219 aa10.96□□□□□ -0.65
CAPN3-202ENST00000337571 BTBD3Q9Y2F9 522 aa10.96□□□□□ -0.65
CAPN3-202ENST00000337571 HS3ST4Q9Y661 456 aa10.96□□□□□ -0.65
CAPN3-202ENST00000337571 A0A1B0GTQ1 180 aa10.95□□□□□ -0.66
CAPN3-202ENST00000337571 TLR4O00206 839 aa10.95□□□□□ -0.66
CAPN3-202ENST00000337571 MCF2LO15068 1137 aa10.95□□□□□ -0.66
CAPN3-202ENST00000337571 YKT6O15498 198 aa10.95□□□□□ -0.66
CAPN3-202ENST00000337571 SLC7A4O43246 635 aa10.95□□□□□ -0.66
CAPN3-202ENST00000337571 ATP9BO43861 1147 aa10.95□□□□□ -0.66
CAPN3-202ENST00000337571 DAB1O75553 588 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms