RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 GMIPQ9P107 970 aa23.61■■□□□ 1.37
CLPTM1-201ENST00000337392 ATP6V1G2O95670 118 aa23.6■■□□□ 1.37
CLPTM1-201ENST00000337392 MLNP12872 115 aa23.6■■□□□ 1.37
CLPTM1-201ENST00000337392 CCNFP41002 786 aa23.6■■□□□ 1.37
CLPTM1-201ENST00000337392 TUBP50607 506 aa23.6■■□□□ 1.37
CLPTM1-201ENST00000337392 LGSNQ5TDP6 509 aa23.6■■□□□ 1.37
CLPTM1-201ENST00000337392 FAM171A1Q5VUB5 890 aa23.6■■□□□ 1.37
CLPTM1-201ENST00000337392 TEKT5Q96M29 485 aa23.6■■□□□ 1.37
CLPTM1-201ENST00000337392 TRIM55Q9BYV6 548 aa23.6■■□□□ 1.37
CLPTM1-201ENST00000337392 HS3ST4Q9Y661 456 aa23.6■■□□□ 1.37
CLPTM1-201ENST00000337392 MGRN1O60291 552 aa23.6■■□□□ 1.37
CLPTM1-201ENST00000337392 GJB3O75712 270 aa23.6■■□□□ 1.37
CLPTM1-201ENST00000337392 TOMM70O94826 608 aa23.6■■□□□ 1.37
CLPTM1-201ENST00000337392 TROVE2P10155 538 aaKnown RBP eCLIP23.6■■□□□ 1.37
CLPTM1-201ENST00000337392 CST5P28325 142 aaPredicted RBP23.6■■□□□ 1.37
CLPTM1-201ENST00000337392 CHRNA4P43681 627 aa23.6■■□□□ 1.37
CLPTM1-201ENST00000337392 EIF4EBP2Q13542 120 aaPredicted RBP23.6■■□□□ 1.37
CLPTM1-201ENST00000337392 VARS2Q5ST30 1063 aaKnown RBP23.6■■□□□ 1.37
CLPTM1-201ENST00000337392 STRA8Q7Z7C7 330 aa23.6■■□□□ 1.37
CLPTM1-201ENST00000337392 CLNKQ7Z7G1 428 aa23.6■■□□□ 1.37
CLPTM1-201ENST00000337392 CHSY1Q86X52 802 aa23.6■■□□□ 1.37
CLPTM1-201ENST00000337392 DBF4BQ8NFT6 615 aa23.6■■□□□ 1.37
CLPTM1-201ENST00000337392 DPF3Q92784 378 aa23.6■■□□□ 1.37
CLPTM1-201ENST00000337392 E2F7Q96AV8 911 aa23.6■■□□□ 1.37
CLPTM1-201ENST00000337392 EIF2B3Q9NR50 452 aaKnown RBP23.6■■□□□ 1.37
CLPTM1-201ENST00000337392 CHD7Q9P2D1 2997 aa23.59■■□□□ 1.37
CLPTM1-201ENST00000337392 PMPCBO75439 489 aa23.59■■□□□ 1.37
CLPTM1-201ENST00000337392 TADA2AO75478 443 aa23.59■■□□□ 1.37
CLPTM1-201ENST00000337392 PRKCGP05129 697 aa23.59■■□□□ 1.37
CLPTM1-201ENST00000337392 CPA2P48052 419 aa23.59■■□□□ 1.37
CLPTM1-201ENST00000337392 ARFIP2P53365 341 aa23.59■■□□□ 1.37
CLPTM1-201ENST00000337392 MAXP61244 160 aa23.59■■□□□ 1.37
CLPTM1-201ENST00000337392 NKX3-2P78367 333 aa23.59■■□□□ 1.37
CLPTM1-201ENST00000337392 CDK16Q00536 496 aa23.59■■□□□ 1.37
CLPTM1-201ENST00000337392 DSC1Q08554 894 aa23.59■■□□□ 1.37
CLPTM1-201ENST00000337392 EFEMP1Q12805 493 aa23.59■■□□□ 1.37
CLPTM1-201ENST00000337392 GPNMBQ14956 572 aa23.59■■□□□ 1.37
CLPTM1-201ENST00000337392 PIK3R6Q5UE93 754 aa23.59■■□□□ 1.37
CLPTM1-201ENST00000337392 ARHGEF3Q9NR81 526 aa23.59■■□□□ 1.37
CLPTM1-201ENST00000337392 TMEM216Q9P0N5 145 aa23.59■■□□□ 1.37
CLPTM1-201ENST00000337392 KIF1CO43896 1103 aaKnown RBP23.59■■□□□ 1.37
CLPTM1-201ENST00000337392 CNTN5O94779 1100 aa23.59■■□□□ 1.37
CLPTM1-201ENST00000337392 CCNB1P14635 433 aa23.59■■□□□ 1.37
CLPTM1-201ENST00000337392 ARRB2P32121 409 aa23.59■■□□□ 1.37
CLPTM1-201ENST00000337392 PCSK7Q16549 785 aa23.59■■□□□ 1.37
CLPTM1-201ENST00000337392 LHX8Q68G74 356 aa23.59■■□□□ 1.37
CLPTM1-201ENST00000337392 PDZD4Q76G19 769 aaPredicted RBP23.59■■□□□ 1.37
CLPTM1-201ENST00000337392 MARK2Q7KZI7 788 aaKnown RBP23.59■■□□□ 1.37
CLPTM1-201ENST00000337392 DCLK2Q8N568 766 aa23.59■■□□□ 1.37
CLPTM1-201ENST00000337392 SLC7A6OSQ96CW6 309 aaPredicted RBP23.59■■□□□ 1.37
CLPTM1-201ENST00000337392 BRD8Q9H0E9 1235 aa23.59■■□□□ 1.37
CLPTM1-201ENST00000337392 NOD2Q9HC29 1040 aa23.59■■□□□ 1.37
CLPTM1-201ENST00000337392 IARS2Q9NSE4 1012 aaKnown RBP23.59■■□□□ 1.37
CLPTM1-201ENST00000337392 ABCC13Q9NSE7 274 aa23.59■■□□□ 1.37
CLPTM1-201ENST00000337392 ARL8BQ9NVJ2 186 aa23.59■■□□□ 1.37
CLPTM1-201ENST00000337392 MTO1Q9Y2Z2 717 aaKnown RBP23.59■■□□□ 1.37
CLPTM1-201ENST00000337392 CCDC189A1A4V9 331 aa23.58■■□□□ 1.37
CLPTM1-201ENST00000337392 C2CD2LO14523 706 aa23.58■■□□□ 1.37
CLPTM1-201ENST00000337392 NBNO60934 754 aa23.58■■□□□ 1.37
CLPTM1-201ENST00000337392 INHAP05111 366 aa23.58■■□□□ 1.37
CLPTM1-201ENST00000337392 MAP2K2P36507 400 aa23.58■■□□□ 1.37
CLPTM1-201ENST00000337392 PSMD5Q16401 504 aa23.58■■□□□ 1.37
CLPTM1-201ENST00000337392 CTC1Q2NKJ3 1217 aa23.58■■□□□ 1.37
CLPTM1-201ENST00000337392 ANKRD20A4Q4UJ75 823 aa23.58■■□□□ 1.37
CLPTM1-201ENST00000337392 MAP3K21Q5TCX8 1036 aa23.58■■□□□ 1.37
CLPTM1-201ENST00000337392 GBP7Q8N8V2 638 aaPredicted RBP23.58■■□□□ 1.37
CLPTM1-201ENST00000337392 MYEOVQ96EZ4 313 aa23.58■■□□□ 1.37
CLPTM1-201ENST00000337392 CAPNS2Q96L46 248 aa23.58■■□□□ 1.37
CLPTM1-201ENST00000337392 KLHL5Q96PQ7 755 aa23.58■■□□□ 1.37
CLPTM1-201ENST00000337392 EBF4Q9BQW3 602 aa23.58■■□□□ 1.37
CLPTM1-201ENST00000337392 OXCT2Q9BYC2 517 aaPredicted RBP23.58■■□□□ 1.37
CLPTM1-201ENST00000337392 C20orf96Q9NUD7 363 aaPredicted RBP23.58■■□□□ 1.37
CLPTM1-201ENST00000337392 DSEQ9UL01 958 aa23.58■■□□□ 1.37
CLPTM1-201ENST00000337392 NYNRINQ9P2P1 1898 aaKnown RBP23.58■■□□□ 1.37
CLPTM1-201ENST00000337392 DNAJC6O75061 913 aa23.58■■□□□ 1.36
CLPTM1-201ENST00000337392 TYK2P29597 1187 aa23.58■■□□□ 1.36
CLPTM1-201ENST00000337392 CCR1P32246 355 aa23.58■■□□□ 1.36
CLPTM1-201ENST00000337392 CBLBQ13191 982 aa23.58■■□□□ 1.36
CLPTM1-201ENST00000337392 SNCBQ16143 134 aa23.58■■□□□ 1.36
CLPTM1-201ENST00000337392 FAM26DQ5JW98 314 aa23.58■■□□□ 1.36
CLPTM1-201ENST00000337392 TAS1R1Q7RTX1 841 aa23.58■■□□□ 1.36
CLPTM1-201ENST00000337392 ATPAF2Q8N5M1 289 aa23.58■■□□□ 1.36
CLPTM1-201ENST00000337392 IRGQQ8WZA9 623 aa23.58■■□□□ 1.36
CLPTM1-201ENST00000337392 ARHGEF38Q9NXL2 777 aa23.58■■□□□ 1.36
CLPTM1-201ENST00000337392 BFARQ9NZS9 450 aa23.58■■□□□ 1.36
CLPTM1-201ENST00000337392 TXNDC16Q9P2K2 825 aa23.58■■□□□ 1.36
CLPTM1-201ENST00000337392 SLC2A6Q9UGQ3 507 aa23.58■■□□□ 1.36
CLPTM1-201ENST00000337392 MAFKO60675 156 aa23.57■■□□□ 1.36
CLPTM1-201ENST00000337392 ALDH3A1P30838 453 aa23.57■■□□□ 1.36
CLPTM1-201ENST00000337392 CRHR1P34998 444 aa23.57■■□□□ 1.36
CLPTM1-201ENST00000337392 SERPINB6P35237 376 aa23.57■■□□□ 1.36
CLPTM1-201ENST00000337392 AVPR1AP37288 418 aa23.57■■□□□ 1.36
CLPTM1-201ENST00000337392 HCAR3P49019 387 aa23.57■■□□□ 1.36
CLPTM1-201ENST00000337392 AIF1P55008 147 aa23.57■■□□□ 1.36
CLPTM1-201ENST00000337392 ZNF460Q14592 562 aa23.57■■□□□ 1.36
CLPTM1-201ENST00000337392 FASTKD1Q53R41 847 aaKnown RBP23.57■■□□□ 1.36
CLPTM1-201ENST00000337392 ALFQ53S48 1182 aa23.57■■□□□ 1.36
CLPTM1-201ENST00000337392 FSTL4Q6MZW2 842 aa23.57■■□□□ 1.36
CLPTM1-201ENST00000337392 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.57■■□□□ 1.36
CLPTM1-201ENST00000337392 CDKL2Q92772 493 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms