RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 AMHR2Q16671 573 aa13.48□□□□□ -0.25
COL2A1-201ENST00000337299 CRTC3Q6UUV7 619 aa13.48□□□□□ -0.25
COL2A1-201ENST00000337299 CHST15Q7LFX5 561 aaPredicted RBP13.48□□□□□ -0.25
COL2A1-201ENST00000337299 LRRC71Q8N4P6 559 aa13.48□□□□□ -0.25
COL2A1-201ENST00000337299 JOSD2Q8TAC2 188 aa13.48□□□□□ -0.25
COL2A1-201ENST00000337299 MTERF3Q96E29 417 aa13.48□□□□□ -0.25
COL2A1-201ENST00000337299 FANCEQ9HB96 536 aa13.48□□□□□ -0.25
COL2A1-201ENST00000337299 JPH1Q9HDC5 661 aaPredicted RBP13.48□□□□□ -0.25
COL2A1-201ENST00000337299 PRELID1Q9Y255 219 aa13.48□□□□□ -0.25
COL2A1-201ENST00000337299 ANKRD26Q9UPS8 1709 aa13.48□□□□□ -0.25
COL2A1-201ENST00000337299 DHRS12A0PJE2 317 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 K7EPI3 171 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 TRAFD1O14545 582 aaPredicted RBP13.47□□□□□ -0.25
COL2A1-201ENST00000337299 F7P08709 466 aaPredicted RBP13.47□□□□□ -0.25
COL2A1-201ENST00000337299 GMPSP49915 693 aaPredicted RBP13.47□□□□□ -0.25
COL2A1-201ENST00000337299 COPZ1P61923 177 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 IL23RQ5VWK5 629 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 PAGE2Q7Z2X7 111 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 SLC4A11Q8NBS3 891 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 FIG4Q92562 907 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 ACE2Q9BYF1 805 aaPredicted RBP13.47□□□□□ -0.25
COL2A1-201ENST00000337299 CDH19Q9H159 772 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 SPAG4Q9NPE6 437 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 GGA3Q9NZ52 723 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 FEM1BQ9UK73 627 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 STAP1Q9ULZ2 295 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 IPPQ9Y573 584 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 NCF1BA6NI72 391 aaPredicted RBP13.47□□□□□ -0.25
COL2A1-201ENST00000337299 NCF1CA8MVU1 366 aaPredicted RBP13.47□□□□□ -0.25
COL2A1-201ENST00000337299 VWA5AO00534 786 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 CCNKO75909 580 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 ITGB3P05106 788 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 NCF1P14598 390 aaPredicted RBP13.47□□□□□ -0.25
COL2A1-201ENST00000337299 BAATQ14032 418 aaPredicted RBP13.47□□□□□ -0.25
COL2A1-201ENST00000337299 KCTD8Q6ZWB6 473 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 DSEQ9UL01 958 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 ST14Q9Y5Y6 855 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 CDK4P11802 303 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 TMEM62Q0P6H9 643 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 POU6F1Q14863 301 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 GOLGA7BQ2TAP0 167 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 SCARA3Q6AZY7 606 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 SLC7A5P1Q8MH63 180 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 FAM151AQ8WW52 585 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 TMIGD2Q96BF3 282 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 TAAR1Q96RJ0 339 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 EBNA1BP2Q99848 306 aaKnown RBP13.47□□□□□ -0.25
COL2A1-201ENST00000337299 NAT9Q9BTE0 207 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 SLC25A23Q9BV35 468 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 CACNA2D2Q9NY47 1150 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 NDUFAF1Q9Y375 327 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 MYH7P12883 1935 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 SUPT3HB4E1H0 165 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 ZNF182P17025 639 aaPredicted RBP13.47□□□□□ -0.25
COL2A1-201ENST00000337299 IQSEC1Q6DN90 963 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 TXNRD3NBQ6F5E7 133 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 SPPL2CQ8IUH8 684 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 SHCBP1Q8NEM2 672 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 PPHLN1Q8NEY8 458 aaKnown RBP13.47□□□□□ -0.25
COL2A1-201ENST00000337299 SUN5Q8TC36 379 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 APBB2Q92870 758 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 VANGL2Q9ULK5 521 aa13.47□□□□□ -0.25
COL2A1-201ENST00000337299 EEF2KO00418 725 aaKnown RBP13.46□□□□□ -0.25
COL2A1-201ENST00000337299 DNAJA2O60884 412 aa13.46□□□□□ -0.25
COL2A1-201ENST00000337299 CSH1P0DML2 217 aa13.46□□□□□ -0.25
COL2A1-201ENST00000337299 CSH2P0DML3 217 aa13.46□□□□□ -0.25
COL2A1-201ENST00000337299 FCGR1AP12314 374 aa13.46□□□□□ -0.25
COL2A1-201ENST00000337299 ACAT1P24752 427 aaKnown RBP13.46□□□□□ -0.25
COL2A1-201ENST00000337299 ADSSP30520 456 aa13.46□□□□□ -0.25
COL2A1-201ENST00000337299 TRAF3Q13114 568 aa13.46□□□□□ -0.25
COL2A1-201ENST00000337299 ULK4Q96C45 1275 aa13.46□□□□□ -0.25
COL2A1-201ENST00000337299 KIF12Q96FN5 646 aa13.46□□□□□ -0.25
COL2A1-201ENST00000337299 TMEM216Q9P0N5 145 aa13.46□□□□□ -0.25
COL2A1-201ENST00000337299 VPS51Q9UID3 782 aa13.46□□□□□ -0.25
COL2A1-201ENST00000337299 BTBD3Q9Y2F9 522 aa13.46□□□□□ -0.25
COL2A1-201ENST00000337299 CARD8Q9Y2G2 431 aa13.46□□□□□ -0.25
COL2A1-201ENST00000337299 SNCAIPQ9Y6H5 919 aa13.46□□□□□ -0.25
COL2A1-201ENST00000337299 CACNA1FO60840 1977 aa13.46□□□□□ -0.25
COL2A1-201ENST00000337299 IFT172Q9UG01 1749 aa13.46□□□□□ -0.25
COL2A1-201ENST00000337299 NID2Q14112 1375 aa13.46□□□□□ -0.25
COL2A1-201ENST00000337299 ANKRD33BA6NCL7 494 aa13.46□□□□□ -0.25
COL2A1-201ENST00000337299 CENPXA8MT69 81 aa13.46□□□□□ -0.25
COL2A1-201ENST00000337299 CXorf49A8MYA2 514 aaPredicted RBP13.46□□□□□ -0.25
COL2A1-201ENST00000337299 E5RJQ4 531 aa13.46□□□□□ -0.25
COL2A1-201ENST00000337299 CHADO15335 359 aa13.46□□□□□ -0.25
COL2A1-201ENST00000337299 MED26O95402 600 aa13.46□□□□□ -0.25
COL2A1-201ENST00000337299 BCAP31P51572 246 aa13.46□□□□□ -0.25
COL2A1-201ENST00000337299 DNASE1L3Q13609 305 aa13.46□□□□□ -0.25
COL2A1-201ENST00000337299 CDH24Q86UP0 819 aa13.46□□□□□ -0.25
COL2A1-201ENST00000337299 TTC30AQ86WT1 665 aa13.46□□□□□ -0.25
COL2A1-201ENST00000337299 ZDHHC13Q8IUH4 622 aa13.46□□□□□ -0.25
COL2A1-201ENST00000337299 C8orf59Q8N0T1 100 aaPredicted RBP13.46□□□□□ -0.25
COL2A1-201ENST00000337299 DCAKDQ8WVC6 231 aa13.46□□□□□ -0.25
COL2A1-201ENST00000337299 SNX15Q9NRS6 342 aa13.46□□□□□ -0.25
COL2A1-201ENST00000337299 DPP3Q9NY33 737 aa13.46□□□□□ -0.25
COL2A1-201ENST00000337299 POLIQ9UNA4 740 aa13.46□□□□□ -0.25
COL2A1-201ENST00000337299 SNX8Q9Y5X2 465 aa13.46□□□□□ -0.25
COL2A1-201ENST00000337299 GON4LQ3T8J9 2241 aa13.46□□□□□ -0.26
COL2A1-201ENST00000337299 ENTPD3O75355 529 aa13.46□□□□□ -0.26
COL2A1-201ENST00000337299 MYO1DO94832 1006 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms