RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 KCNMB4Q86W47 210 aa18.09■□□□□ 0.49
LRCH3-201ENST00000334859 DNAJC9Q8WXX5 260 aa18.09■□□□□ 0.49
LRCH3-201ENST00000334859 UPF1Q92900 1129 aaKnown RBP eCLIP18.09■□□□□ 0.49
LRCH3-201ENST00000334859 SORT1Q99523 831 aa18.09■□□□□ 0.49
LRCH3-201ENST00000334859 NMRK1Q9NWW6 199 aa18.09■□□□□ 0.49
LRCH3-201ENST00000334859 RRN3Q9NYV6 651 aa18.09■□□□□ 0.49
LRCH3-201ENST00000334859 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.08■□□□□ 0.48
LRCH3-201ENST00000334859 CCDC78A2IDD5 438 aa18.08■□□□□ 0.48
LRCH3-201ENST00000334859 ARRB2P32121 409 aa18.08■□□□□ 0.48
LRCH3-201ENST00000334859 VHLP40337 213 aa18.08■□□□□ 0.48
LRCH3-201ENST00000334859 ERFP50548 548 aa18.08■□□□□ 0.48
LRCH3-201ENST00000334859 RAP1GDS1P52306 607 aa18.08■□□□□ 0.48
LRCH3-201ENST00000334859 PPP2R5DQ14738 602 aa18.08■□□□□ 0.48
LRCH3-201ENST00000334859 TAF1CQ15572 869 aaPredicted RBP18.08■□□□□ 0.48
LRCH3-201ENST00000334859 DLG2Q15700 870 aa18.08■□□□□ 0.48
LRCH3-201ENST00000334859 CCDC153Q494R4 210 aa18.08■□□□□ 0.48
LRCH3-201ENST00000334859 RWDD4Q6NW29 188 aaKnown RBP18.08■□□□□ 0.48
LRCH3-201ENST00000334859 BHLHA9Q7RTU4 235 aa18.08■□□□□ 0.48
LRCH3-201ENST00000334859 RSPH3Q86UC2 560 aa18.08■□□□□ 0.48
LRCH3-201ENST00000334859 SCUBE1Q8IWY4 988 aa18.08■□□□□ 0.48
LRCH3-201ENST00000334859 ULK2Q8IYT8 1036 aa18.08■□□□□ 0.48
LRCH3-201ENST00000334859 PLD6Q8N2A8 252 aaKnown RBP18.08■□□□□ 0.48
LRCH3-201ENST00000334859 STN1Q9H668 368 aaKnown RBP18.08■□□□□ 0.48
LRCH3-201ENST00000334859 CHRAC1Q9NRG0 131 aa18.08■□□□□ 0.48
LRCH3-201ENST00000334859 CEP350Q5VT06 3117 aa18.08■□□□□ 0.48
LRCH3-201ENST00000334859 A0A096LPK6 155 aa18.07■□□□□ 0.48
LRCH3-201ENST00000334859 GOLGA8TH3BQL2 631 aa18.07■□□□□ 0.48
LRCH3-201ENST00000334859 SRGAP2BP0DMP2 458 aa18.07■□□□□ 0.48
LRCH3-201ENST00000334859 ATP6V1C1P21283 382 aa18.07■□□□□ 0.48
LRCH3-201ENST00000334859 BDNFP23560 247 aa18.07■□□□□ 0.48
LRCH3-201ENST00000334859 CXCR3P49682 368 aa18.07■□□□□ 0.48
LRCH3-201ENST00000334859 ABCE1P61221 599 aaKnown RBP18.07■□□□□ 0.48
LRCH3-201ENST00000334859 IRF9Q00978 393 aa18.07■□□□□ 0.48
LRCH3-201ENST00000334859 MPP3Q13368 585 aa18.07■□□□□ 0.48
LRCH3-201ENST00000334859 TUBB3Q13509 450 aa18.07■□□□□ 0.48
LRCH3-201ENST00000334859 TIGD5Q53EQ6 642 aa18.07■□□□□ 0.48
LRCH3-201ENST00000334859 INTS6LQ5JSJ4 861 aaKnown RBP18.07■□□□□ 0.48
LRCH3-201ENST00000334859 C6orf163Q5TEZ5 329 aa18.07■□□□□ 0.48
LRCH3-201ENST00000334859 SNX30Q5VWJ9 437 aa18.07■□□□□ 0.48
LRCH3-201ENST00000334859 ATG14Q6ZNE5 492 aa18.07■□□□□ 0.48
LRCH3-201ENST00000334859 MAVSQ7Z434 540 aa18.07■□□□□ 0.48
LRCH3-201ENST00000334859 USP33Q8TEY7 942 aa18.07■□□□□ 0.48
LRCH3-201ENST00000334859 TBX10O75333 385 aa18.07■□□□□ 0.48
LRCH3-201ENST00000334859 TM7SF2O76062 418 aa18.07■□□□□ 0.48
LRCH3-201ENST00000334859 ODC1P11926 461 aa18.07■□□□□ 0.48
LRCH3-201ENST00000334859 AOC1P19801 751 aa18.07■□□□□ 0.48
LRCH3-201ENST00000334859 RGS2P41220 211 aa18.07■□□□□ 0.48
LRCH3-201ENST00000334859 SLC34A1Q06495 639 aa18.07■□□□□ 0.48
LRCH3-201ENST00000334859 VWA5B1Q5TIE3 1220 aa18.07■□□□□ 0.48
LRCH3-201ENST00000334859 HASPINQ8TF76 798 aa18.07■□□□□ 0.48
LRCH3-201ENST00000334859 ISL2Q96A47 359 aa18.07■□□□□ 0.48
LRCH3-201ENST00000334859 MIEF2Q96C03 454 aa18.07■□□□□ 0.48
LRCH3-201ENST00000334859 VAT1Q99536 393 aa18.07■□□□□ 0.48
LRCH3-201ENST00000334859 IL22Q9GZX6 179 aa18.07■□□□□ 0.48
LRCH3-201ENST00000334859 SIK2Q9H0K1 926 aa18.07■□□□□ 0.48
LRCH3-201ENST00000334859 IARS2Q9NSE4 1012 aaKnown RBP18.07■□□□□ 0.48
LRCH3-201ENST00000334859 PLA2G4CQ9UP65 541 aa18.07■□□□□ 0.48
LRCH3-201ENST00000334859 SORCS3Q9UPU3 1222 aa18.07■□□□□ 0.48
LRCH3-201ENST00000334859 Q9Y3F1 56 aa18.07■□□□□ 0.48
LRCH3-201ENST00000334859 DFFAO00273 331 aa18.06■□□□□ 0.48
LRCH3-201ENST00000334859 SIN3BO75182 1162 aa18.06■□□□□ 0.48
LRCH3-201ENST00000334859 ABL2P42684 1182 aa18.06■□□□□ 0.48
LRCH3-201ENST00000334859 MAGEA12P43365 314 aa18.06■□□□□ 0.48
LRCH3-201ENST00000334859 IDH3AP50213 366 aa18.06■□□□□ 0.48
LRCH3-201ENST00000334859 PRPSAP1Q14558 356 aa18.06■□□□□ 0.48
LRCH3-201ENST00000334859 GNASQ5JWF2 1037 aa18.06■□□□□ 0.48
LRCH3-201ENST00000334859 RABGAP1LQ5R372 815 aa18.06■□□□□ 0.48
LRCH3-201ENST00000334859 CXCL17Q6UXB2 119 aa18.06■□□□□ 0.48
LRCH3-201ENST00000334859 AGMOQ6ZNB7 445 aa18.06■□□□□ 0.48
LRCH3-201ENST00000334859 POU5F2Q8N7G0 328 aa18.06■□□□□ 0.48
LRCH3-201ENST00000334859 TEKT5Q96M29 485 aa18.06■□□□□ 0.48
LRCH3-201ENST00000334859 APBA2Q99767 749 aa18.06■□□□□ 0.48
LRCH3-201ENST00000334859 TIMM44O43615 452 aa18.06■□□□□ 0.48
LRCH3-201ENST00000334859 B3GAT3O94766 335 aa18.06■□□□□ 0.48
LRCH3-201ENST00000334859 HSPA4LO95757 839 aa18.06■□□□□ 0.48
LRCH3-201ENST00000334859 UPP1Q16831 310 aa18.06■□□□□ 0.48
LRCH3-201ENST00000334859 LRRC74BQ6ZQY2 392 aa18.06■□□□□ 0.48
LRCH3-201ENST00000334859 RIPOR1Q6ZS17 1223 aa18.06■□□□□ 0.48
LRCH3-201ENST00000334859 CFAP61Q8NHU2 1237 aa18.06■□□□□ 0.48
LRCH3-201ENST00000334859 URGCPQ8TCY9 931 aa18.06■□□□□ 0.48
LRCH3-201ENST00000334859 MICAL1Q8TDZ2 1067 aa18.06■□□□□ 0.48
LRCH3-201ENST00000334859 DQX1Q8TE96 717 aaKnown RBP18.06■□□□□ 0.48
LRCH3-201ENST00000334859 NRG4Q8WWG1 115 aa18.06■□□□□ 0.48
LRCH3-201ENST00000334859 VPS39Q96JC1 886 aa18.06■□□□□ 0.48
LRCH3-201ENST00000334859 FAM96AQ9H5X1 160 aa18.06■□□□□ 0.48
LRCH3-201ENST00000334859 STX18Q9P2W9 335 aaKnown RBP18.06■□□□□ 0.48
LRCH3-201ENST00000334859 SOX13Q9UN79 622 aa18.06■□□□□ 0.48
LRCH3-201ENST00000334859 POMCP01189 267 aa18.05■□□□□ 0.48
LRCH3-201ENST00000334859 MPOP05164 745 aa18.05■□□□□ 0.48
LRCH3-201ENST00000334859 SAT1P21673 171 aa18.05■□□□□ 0.48
LRCH3-201ENST00000334859 NMBRP28336 390 aa18.05■□□□□ 0.48
LRCH3-201ENST00000334859 NPY2RP49146 381 aa18.05■□□□□ 0.48
LRCH3-201ENST00000334859 CDK7P50613 346 aa18.05■□□□□ 0.48
LRCH3-201ENST00000334859 ZNF135P52742 658 aaPredicted RBP18.05■□□□□ 0.48
LRCH3-201ENST00000334859 CDH17Q12864 832 aa18.05■□□□□ 0.48
LRCH3-201ENST00000334859 TRMT5Q32P41 509 aaKnown RBP18.05■□□□□ 0.48
LRCH3-201ENST00000334859 CFAP157Q5JU67 520 aa18.05■□□□□ 0.48
LRCH3-201ENST00000334859 C1orf146Q5VVC0 180 aa18.05■□□□□ 0.48
LRCH3-201ENST00000334859 NAPEPLDQ6IQ20 393 aa18.05■□□□□ 0.48
LRCH3-201ENST00000334859 GDF6Q6KF10 455 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms