RNA–Protein interactions for RNA: ENST00000334464.6

PDZD8-201, Transcript of PDZ domain containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD8, Length 9,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-201ENST00000334464 TUT1Q9H6E5 874 aaKnown RBP16.91■□□□□ 0.3
PDZD8-201ENST00000334464 KLHL1Q9NR64 748 aa16.91■□□□□ 0.3
PDZD8-201ENST00000334464 MLYCDO95822 493 aa16.91■□□□□ 0.3
PDZD8-201ENST00000334464 ETS1P14921 441 aa16.91■□□□□ 0.3
PDZD8-201ENST00000334464 HNRNPH1P31943 449 aaKnown RBP16.91■□□□□ 0.3
PDZD8-201ENST00000334464 FAM131BQ86XD5 332 aa16.91■□□□□ 0.3
PDZD8-201ENST00000334464 SPG21Q9NZD8 308 aa16.91■□□□□ 0.3
PDZD8-201ENST00000334464 LBPP18428 481 aa16.91■□□□□ 0.3
PDZD8-201ENST00000334464 TRAF3Q13114 568 aa16.91■□□□□ 0.3
PDZD8-201ENST00000334464 ZNF184Q99676 751 aaPredicted RBP16.91■□□□□ 0.3
PDZD8-201ENST00000334464 ZSCAN5CA6NGD5 496 aaPredicted RBP16.91■□□□□ 0.3
PDZD8-201ENST00000334464 URADA6NGE7 173 aa16.91■□□□□ 0.3
PDZD8-201ENST00000334464 S100A3P33764 101 aa16.91■□□□□ 0.3
PDZD8-201ENST00000334464 ARMC12Q5T9G4 340 aa16.91■□□□□ 0.3
PDZD8-201ENST00000334464 ZCCHC9Q8N567 271 aaKnown RBP16.91■□□□□ 0.3
PDZD8-201ENST00000334464 CSGALNACT1Q8TDX6 532 aa16.91■□□□□ 0.3
PDZD8-201ENST00000334464 IRGMA1A4Y4 181 aa16.9■□□□□ 0.3
PDZD8-201ENST00000334464 SEC22BO75396 215 aa16.9■□□□□ 0.3
PDZD8-201ENST00000334464 EN1Q05925 392 aaPredicted RBP16.9■□□□□ 0.3
PDZD8-201ENST00000334464 GRB10Q13322 594 aa16.9■□□□□ 0.3
PDZD8-201ENST00000334464 POLR1EQ9GZS1 481 aaKnown RBP16.9■□□□□ 0.3
PDZD8-201ENST00000334464 TUBP50607 506 aa16.9■□□□□ 0.3
PDZD8-201ENST00000334464 CSNK2BP67870 215 aa16.9■□□□□ 0.3
PDZD8-201ENST00000334464 MCOLN2Q8IZK6 566 aa16.9■□□□□ 0.3
PDZD8-201ENST00000334464 CROCCQ5TZA2 2017 aa16.9■□□□□ 0.3
PDZD8-201ENST00000334464 NRXN1Q9ULB1 1477 aa16.9■□□□□ 0.3
PDZD8-201ENST00000334464 MYBL2P10244 700 aa16.9■□□□□ 0.3
PDZD8-201ENST00000334464 GALNT18Q6P9A2 607 aa16.9■□□□□ 0.3
PDZD8-201ENST00000334464 CAMK1DQ8IU85 385 aa16.9■□□□□ 0.3
PDZD8-201ENST00000334464 PHC3Q8NDX5 983 aa16.9■□□□□ 0.3
PDZD8-201ENST00000334464 QKIQ96PU8 341 aaKnown RBP eCLIP16.9■□□□□ 0.34e-9■■■■■ 82.5
PDZD8-201ENST00000334464 UBP1Q9NZI7 540 aa16.9■□□□□ 0.3
PDZD8-201ENST00000334464 PLEKP08567 350 aaPredicted RBP16.9■□□□□ 0.3
PDZD8-201ENST00000334464 DEPDC4Q8N2C3 294 aa16.9■□□□□ 0.3
PDZD8-201ENST00000334464 ATG4AQ8WYN0 398 aa16.9■□□□□ 0.3
PDZD8-201ENST00000334464 APOC4-APOC2K7ER74 178 aa16.9■□□□□ 0.3
PDZD8-201ENST00000334464 NUDT14O95848 222 aa16.9■□□□□ 0.3
PDZD8-201ENST00000334464 APOC2P02655 101 aa16.9■□□□□ 0.3
PDZD8-201ENST00000334464 THOP1P52888 689 aa16.9■□□□□ 0.3
PDZD8-201ENST00000334464 R3HDM1Q15032 1099 aaKnown RBP16.9■□□□□ 0.3
PDZD8-201ENST00000334464 GRIK4Q16099 956 aa16.9■□□□□ 0.3
PDZD8-201ENST00000334464 MILR1Q7Z6M3 343 aa16.9■□□□□ 0.3
PDZD8-201ENST00000334464 METTL6Q8TCB7 284 aa16.9■□□□□ 0.3
PDZD8-201ENST00000334464 WDR60Q8WVS4 1066 aa16.9■□□□□ 0.3
PDZD8-201ENST00000334464 TSPAN16Q9UKR8 245 aa16.9■□□□□ 0.3
PDZD8-201ENST00000334464 R3HCC1LQ7Z5L2 792 aaKnown RBP16.9■□□□□ 0.3
PDZD8-201ENST00000334464 FBXO16Q8IX29 292 aaPredicted RBP16.9■□□□□ 0.3
PDZD8-201ENST00000334464 TRIM43BA6NCK2 446 aa16.9■□□□□ 0.3
PDZD8-201ENST00000334464 CLOCKO15516 846 aa16.9■□□□□ 0.3
PDZD8-201ENST00000334464 TPP2P29144 1249 aaPredicted RBP16.9■□□□□ 0.3
PDZD8-201ENST00000334464 CLCN3P51790 818 aa16.9■□□□□ 0.3
PDZD8-201ENST00000334464 PEX5LQ8IYB4 626 aa16.9■□□□□ 0.3
PDZD8-201ENST00000334464 FRMPD4Q14CM0 1322 aa16.89■□□□□ 0.3
PDZD8-201ENST00000334464 RGL2O15211 777 aa16.89■□□□□ 0.3
PDZD8-201ENST00000334464 ACSM2AQ08AH3 577 aa16.89■□□□□ 0.3
PDZD8-201ENST00000334464 FAXCQ5TGI0 409 aa16.89■□□□□ 0.3
PDZD8-201ENST00000334464 ACSM2BQ68CK6 577 aa16.89■□□□□ 0.3
PDZD8-201ENST00000334464 NKAPQ8N5F7 415 aaKnown RBP16.89■□□□□ 0.3
PDZD8-201ENST00000334464 RP9Q8TA86 221 aaKnown RBP16.89■□□□□ 0.3
PDZD8-201ENST00000334464 GDPD5Q8WTR4 605 aa16.89■□□□□ 0.3
PDZD8-201ENST00000334464 CLUHO75153 1309 aa16.89■□□□□ 0.29
PDZD8-201ENST00000334464 MSCO60682 206 aa16.89■□□□□ 0.29
PDZD8-201ENST00000334464 OGNP20774 298 aaKnown RBP16.89■□□□□ 0.29
PDZD8-201ENST00000334464 CRY1Q16526 586 aa16.89■□□□□ 0.29
PDZD8-201ENST00000334464 ZNF671Q8TAW3 534 aa16.89■□□□□ 0.29
PDZD8-201ENST00000334464 CRNNQ9UBG3 495 aaPredicted RBP16.89■□□□□ 0.29
PDZD8-201ENST00000334464 CAPN1P07384 714 aa16.89■□□□□ 0.29
PDZD8-201ENST00000334464 FGRP09769 529 aa16.89■□□□□ 0.29
PDZD8-201ENST00000334464 CDC42P60953 191 aa16.89■□□□□ 0.29
PDZD8-201ENST00000334464 MIEF2Q96C03 454 aa16.89■□□□□ 0.29
PDZD8-201ENST00000334464 UROC1Q96N76 676 aa16.89■□□□□ 0.29
PDZD8-201ENST00000334464 TAAR1Q96RJ0 339 aa16.89■□□□□ 0.29
PDZD8-201ENST00000334464 SHCBP1LQ9BZQ2 653 aa16.89■□□□□ 0.29
PDZD8-201ENST00000334464 SPATC1LQ9H0A9 340 aa16.89■□□□□ 0.29
PDZD8-201ENST00000334464 CXCL11O14625 94 aa16.89■□□□□ 0.29
PDZD8-201ENST00000334464 BCL2L1Q07817 233 aa16.89■□□□□ 0.29
PDZD8-201ENST00000334464 FGD3Q5JSP0 725 aa16.89■□□□□ 0.29
PDZD8-201ENST00000334464 FBXO42Q6P3S6 717 aa16.89■□□□□ 0.29
PDZD8-201ENST00000334464 CATP04040 527 aaKnown RBP16.89■□□□□ 0.29
PDZD8-201ENST00000334464 PCSK2P16519 638 aa16.89■□□□□ 0.29
PDZD8-201ENST00000334464 COQ7Q99807 217 aa16.89■□□□□ 0.29
PDZD8-201ENST00000334464 POPDC2Q9HBU9 364 aa16.89■□□□□ 0.29
PDZD8-201ENST00000334464 ATP13A1Q9HD20 1204 aa16.89■□□□□ 0.29
PDZD8-201ENST00000334464 PRDM8Q9NQV8 689 aa16.89■□□□□ 0.29
PDZD8-201ENST00000334464 CEP170BQ9Y4F5 1589 aaPredicted RBP16.89■□□□□ 0.29
PDZD8-201ENST00000334464 NINQ8N4C6 2090 aa16.89■□□□□ 0.29
PDZD8-201ENST00000334464 MANSC4A6NHS7 340 aaPredicted RBP16.89■□□□□ 0.29
PDZD8-201ENST00000334464 OR6B1O95007 311 aa16.89■□□□□ 0.29
PDZD8-201ENST00000334464 KATNAL2Q8IYT4 538 aa16.89■□□□□ 0.29
PDZD8-201ENST00000334464 LINC00116Q8NCU8 138 aa16.89■□□□□ 0.29
PDZD8-201ENST00000334464 DLG5Q8TDM6 1919 aa16.89■□□□□ 0.29
PDZD8-201ENST00000334464 ARID1BQ8NFD5 2236 aaPredicted RBP16.89■□□□□ 0.29
PDZD8-201ENST00000334464 BGNP21810 368 aa16.89■□□□□ 0.29
PDZD8-201ENST00000334464 LGALS3BPQ08380 585 aa16.89■□□□□ 0.29
PDZD8-201ENST00000334464 BOP1Q14137 746 aaKnown RBP16.89■□□□□ 0.29
PDZD8-201ENST00000334464 CD101Q93033 1021 aa16.89■□□□□ 0.29
PDZD8-201ENST00000334464 LIMD1Q9UGP4 676 aa16.89■□□□□ 0.29
PDZD8-201ENST00000334464 SNAP91O60641 907 aa16.89■□□□□ 0.29
PDZD8-201ENST00000334464 ZNF286BP0CG31 522 aa16.89■□□□□ 0.29
PDZD8-201ENST00000334464 TTC27Q6P3X3 843 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms