RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 F8W8V4 182 aa13.71□□□□□ -0.21
TUBA1B-201ENST00000332858 G3V2L1 256 aa13.71□□□□□ -0.21
TUBA1B-201ENST00000332858 NFKB1P19838 968 aa13.71□□□□□ -0.21
TUBA1B-201ENST00000332858 PEX19P40855 299 aa13.71□□□□□ -0.21
TUBA1B-201ENST00000332858 CCNHP51946 323 aaPredicted RBP13.71□□□□□ -0.21
TUBA1B-201ENST00000332858 EPHB1P54762 984 aa13.71□□□□□ -0.21
TUBA1B-201ENST00000332858 DAOAP59103 153 aa13.71□□□□□ -0.21
TUBA1B-201ENST00000332858 TPI1P60174 286 aa13.71□□□□□ -0.21
TUBA1B-201ENST00000332858 PPP2R5DQ14738 602 aa13.71□□□□□ -0.21
TUBA1B-201ENST00000332858 SLC9B1Q4ZJI4 515 aa13.71□□□□□ -0.21
TUBA1B-201ENST00000332858 KCTD11Q693B1 232 aa13.71□□□□□ -0.21
TUBA1B-201ENST00000332858 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.71□□□□□ -0.212e-6■■■■■ 41.7
TUBA1B-201ENST00000332858 PYDC1Q8WXC3 89 aa13.71□□□□□ -0.21
TUBA1B-201ENST00000332858 KCTD13Q8WZ19 329 aa13.71□□□□□ -0.21
TUBA1B-201ENST00000332858 PPP1R36Q96LQ0 422 aa13.71□□□□□ -0.21
TUBA1B-201ENST00000332858 ZNF212Q9UDV6 495 aa13.71□□□□□ -0.21
TUBA1B-201ENST00000332858 A0A096LPK6 155 aa13.71□□□□□ -0.21
TUBA1B-201ENST00000332858 ZBTB14O43829 449 aa13.71□□□□□ -0.21
TUBA1B-201ENST00000332858 AP1G2O75843 785 aa13.71□□□□□ -0.21
TUBA1B-201ENST00000332858 FAM200BP0CF97 657 aa13.71□□□□□ -0.21
TUBA1B-201ENST00000332858 SAT1P21673 171 aa13.71□□□□□ -0.21
TUBA1B-201ENST00000332858 DNAL1Q4LDG9 190 aa13.71□□□□□ -0.21
TUBA1B-201ENST00000332858 SPANXN3Q5MJ09 141 aa13.71□□□□□ -0.21
TUBA1B-201ENST00000332858 GRTP1Q5TC63 336 aa13.71□□□□□ -0.21
TUBA1B-201ENST00000332858 LPPQ93052 612 aa13.71□□□□□ -0.21
TUBA1B-201ENST00000332858 CCDC124Q96CT7 223 aaKnown RBP13.71□□□□□ -0.21
TUBA1B-201ENST00000332858 SENP8Q96LD8 212 aa13.71□□□□□ -0.21
TUBA1B-201ENST00000332858 NAT9Q9BTE0 207 aa13.71□□□□□ -0.21
TUBA1B-201ENST00000332858 C1orf21Q9H246 121 aa13.71□□□□□ -0.21
TUBA1B-201ENST00000332858 LRRC40Q9H9A6 602 aa13.71□□□□□ -0.21
TUBA1B-201ENST00000332858 COG4Q9H9E3 785 aa13.71□□□□□ -0.21
TUBA1B-201ENST00000332858 MIOSQ9NXC5 875 aa13.71□□□□□ -0.21
TUBA1B-201ENST00000332858 FBXW11Q9UKB1 542 aa13.71□□□□□ -0.21
TUBA1B-201ENST00000332858 LRCH1Q9Y2L9 728 aa13.71□□□□□ -0.21
TUBA1B-201ENST00000332858 TTC3P53804 2025 aa13.71□□□□□ -0.21
TUBA1B-201ENST00000332858 E9PBE3 544 aa13.71□□□□□ -0.22
TUBA1B-201ENST00000332858 DCXO43602 365 aa13.71□□□□□ -0.22
TUBA1B-201ENST00000332858 KLHL41O60662 606 aa13.71□□□□□ -0.22
TUBA1B-201ENST00000332858 C2P06681 752 aa13.71□□□□□ -0.22
TUBA1B-201ENST00000332858 CYP2B6P20813 491 aa13.71□□□□□ -0.22
TUBA1B-201ENST00000332858 NMBRP28336 390 aa13.71□□□□□ -0.22
TUBA1B-201ENST00000332858 MAGEA12P43365 314 aa13.71□□□□□ -0.22
TUBA1B-201ENST00000332858 HARS2P49590 506 aaKnown RBP13.71□□□□□ -0.22
TUBA1B-201ENST00000332858 CLCNKBP51801 687 aa13.71□□□□□ -0.22
TUBA1B-201ENST00000332858 TRMT5Q32P41 509 aaKnown RBP13.71□□□□□ -0.22
TUBA1B-201ENST00000332858 PDPK2PQ6A1A2 396 aa13.71□□□□□ -0.22
TUBA1B-201ENST00000332858 OTOP3Q7RTS5 596 aa13.71□□□□□ -0.22
TUBA1B-201ENST00000332858 PLEKHH3Q7Z736 793 aa13.71□□□□□ -0.22
TUBA1B-201ENST00000332858 TLK2Q86UE8 772 aa13.71□□□□□ -0.22
TUBA1B-201ENST00000332858 PPP1R10Q96QC0 940 aaKnown RBP13.71□□□□□ -0.22
TUBA1B-201ENST00000332858 TSPYL2Q9H2G4 693 aaPredicted RBP13.71□□□□□ -0.22
TUBA1B-201ENST00000332858 CASS4Q9NQ75 786 aa13.71□□□□□ -0.22
TUBA1B-201ENST00000332858 PACSIN3Q9UKS6 424 aa13.71□□□□□ -0.22
TUBA1B-201ENST00000332858 CIB2O75838 187 aa13.7□□□□□ -0.22
TUBA1B-201ENST00000332858 LIMK2P53671 638 aa13.7□□□□□ -0.22
TUBA1B-201ENST00000332858 PPIDQ08752 370 aaKnown RBP13.7□□□□□ -0.22
TUBA1B-201ENST00000332858 INSCQ1MX18 579 aa13.7□□□□□ -0.22
TUBA1B-201ENST00000332858 ARHGAP36Q6ZRI8 547 aa13.7□□□□□ -0.22
TUBA1B-201ENST00000332858 FRMD7Q6ZUT3 714 aa13.7□□□□□ -0.22
TUBA1B-201ENST00000332858 HIPK4Q8NE63 616 aa13.7□□□□□ -0.22
TUBA1B-201ENST00000332858 ZSCAN18Q8TBC5 510 aaPredicted RBP13.7□□□□□ -0.22
TUBA1B-201ENST00000332858 USP33Q8TEY7 942 aa13.7□□□□□ -0.22
TUBA1B-201ENST00000332858 PPP4R1Q8TF05 950 aa13.7□□□□□ -0.22
TUBA1B-201ENST00000332858 ZNF419Q96HQ0 510 aaPredicted RBP13.7□□□□□ -0.22
TUBA1B-201ENST00000332858 ZNF184Q99676 751 aaPredicted RBP13.7□□□□□ -0.22
TUBA1B-201ENST00000332858 DDX50Q9BQ39 737 aaKnown RBP13.7□□□□□ -0.22
TUBA1B-201ENST00000332858 COLEC11Q9BWP8 271 aa13.7□□□□□ -0.22
TUBA1B-201ENST00000332858 IARS2Q9NSE4 1012 aaKnown RBP13.7□□□□□ -0.22
TUBA1B-201ENST00000332858 BFARQ9NZS9 450 aa13.7□□□□□ -0.22
TUBA1B-201ENST00000332858 SF3B1O75533 1304 aaKnown RBP eCLIP13.7□□□□□ -0.223e-6■■■■■ 66.2
TUBA1B-201ENST00000332858 UNCXA6NJT0 531 aa13.7□□□□□ -0.22
TUBA1B-201ENST00000332858 JCHAINP01591 159 aa13.7□□□□□ -0.22
TUBA1B-201ENST00000332858 CHRNGP07510 517 aa13.7□□□□□ -0.22
TUBA1B-201ENST00000332858 GRK2P25098 689 aa13.7□□□□□ -0.22
TUBA1B-201ENST00000332858 AXLP30530 894 aa13.7□□□□□ -0.22
TUBA1B-201ENST00000332858 CDC42EP1Q00587 391 aa13.7□□□□□ -0.22
TUBA1B-201ENST00000332858 CCL14Q16627 93 aa13.7□□□□□ -0.22
TUBA1B-201ENST00000332858 LRRC36Q1X8D7 754 aa13.7□□□□□ -0.22
TUBA1B-201ENST00000332858 BHLHA9Q7RTU4 235 aa13.7□□□□□ -0.22
TUBA1B-201ENST00000332858 OR52B2Q96RD2 323 aa13.7□□□□□ -0.22
TUBA1B-201ENST00000332858 GAD1Q99259 594 aa13.7□□□□□ -0.22
TUBA1B-201ENST00000332858 C20orf96Q9NUD7 363 aaPredicted RBP13.7□□□□□ -0.22
TUBA1B-201ENST00000332858 OR12D3Q9UGF7 316 aa13.7□□□□□ -0.22
TUBA1B-201ENST00000332858 GOLGA8QA0A0J9YX86 632 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 GOLGA8OA6NCC3 632 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 GOLGA8NF8WBI6 632 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 MAP3K7O43318 606 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 XPOTO43592 962 aaKnown RBP13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 LRIG2O94898 1065 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 MYL3P08590 195 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 SPRP35270 261 aaPredicted RBP13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 PSEN2P49810 448 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 COPAP53621 1224 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 MRPS35P82673 323 aaKnown RBP13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 TBCCQ15814 346 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 FAM35AQ86V20 835 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 CNTD1Q8N815 330 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 SPATA22Q8NHS9 363 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 URGCPQ8TCY9 931 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 FERMT1Q9BQL6 677 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms