RNA–Protein interactions for RNA: ENST00000332728.8

LYSMD4-201, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-201ENST00000332728 BFARQ9NZS9 450 aa18.56■□□□□ 0.56
LYSMD4-201ENST00000332728 TRPM7Q96QT4 1865 aa18.56■□□□□ 0.56
LYSMD4-201ENST00000332728 BUD23O43709 281 aaKnown RBP18.55■□□□□ 0.56
LYSMD4-201ENST00000332728 ZMPSTE24O75844 475 aa18.55■□□□□ 0.56
LYSMD4-201ENST00000332728 NEBLO76041 1014 aa18.55■□□□□ 0.56
LYSMD4-201ENST00000332728 ANP32DO95626 131 aa18.55■□□□□ 0.56
LYSMD4-201ENST00000332728 TUBP50607 506 aa18.55■□□□□ 0.56
LYSMD4-201ENST00000332728 TSPY1Q01534 308 aa18.55■□□□□ 0.56
LYSMD4-201ENST00000332728 EFEMP1Q12805 493 aa18.55■□□□□ 0.56
LYSMD4-201ENST00000332728 FSTL4Q6MZW2 842 aa18.55■□□□□ 0.56
LYSMD4-201ENST00000332728 RAPH1Q70E73 1250 aa18.55■□□□□ 0.56
LYSMD4-201ENST00000332728 ARCQ7LC44 396 aa18.55■□□□□ 0.56
LYSMD4-201ENST00000332728 BNIPLQ7Z465 357 aa18.55■□□□□ 0.56
LYSMD4-201ENST00000332728 DTX3LQ8TDB6 740 aa18.55■□□□□ 0.56
LYSMD4-201ENST00000332728 FAM136AQ96C01 138 aa18.55■□□□□ 0.56
LYSMD4-201ENST00000332728 LRRC39Q96DD0 335 aa18.55■□□□□ 0.56
LYSMD4-201ENST00000332728 SLC39A8Q9C0K1 460 aa18.55■□□□□ 0.56
LYSMD4-201ENST00000332728 SCN10AQ9Y5Y9 1956 aa18.55■□□□□ 0.56
LYSMD4-201ENST00000332728 CD1EP15812 388 aa18.55■□□□□ 0.56
LYSMD4-201ENST00000332728 TSHRP16473 764 aa18.55■□□□□ 0.56
LYSMD4-201ENST00000332728 CDK16Q00536 496 aa18.55■□□□□ 0.56
LYSMD4-201ENST00000332728 TUSC3Q13454 348 aa18.55■□□□□ 0.56
LYSMD4-201ENST00000332728 TEX44Q53QW1 395 aa18.55■□□□□ 0.56
LYSMD4-201ENST00000332728 SCD5Q86SK9 330 aa18.55■□□□□ 0.56
LYSMD4-201ENST00000332728 ZSCAN18Q8TBC5 510 aaPredicted RBP18.55■□□□□ 0.56
LYSMD4-201ENST00000332728 FICDQ9BVA6 458 aa18.55■□□□□ 0.56
LYSMD4-201ENST00000332728 ZNF180Q9UJW8 692 aa18.55■□□□□ 0.56
LYSMD4-201ENST00000332728 Q9Y3F1 56 aa18.55■□□□□ 0.56
LYSMD4-201ENST00000332728 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.55■□□□□ 0.56
LYSMD4-201ENST00000332728 PRRC2BQ5JSZ5 2229 aaKnown RBP18.55■□□□□ 0.56
LYSMD4-201ENST00000332728 ESRRAP11474 423 aaPredicted RBP18.55■□□□□ 0.56
LYSMD4-201ENST00000332728 ANKRD20A4Q4UJ75 823 aa18.55■□□□□ 0.56
LYSMD4-201ENST00000332728 CLLU1OSQ5K130 101 aa18.55■□□□□ 0.56
LYSMD4-201ENST00000332728 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.55■□□□□ 0.56
LYSMD4-201ENST00000332728 CADM1Q9BY67 442 aaKnown RBP18.55■□□□□ 0.56
LYSMD4-201ENST00000332728 FRMD8Q9BZ67 464 aaPredicted RBP18.55■□□□□ 0.56
LYSMD4-201ENST00000332728 AP2A1O95782 977 aa18.54■□□□□ 0.56
LYSMD4-201ENST00000332728 GSRP00390 522 aa18.54■□□□□ 0.56
LYSMD4-201ENST00000332728 MPP1Q00013 466 aa18.54■□□□□ 0.56
LYSMD4-201ENST00000332728 PPIDQ08752 370 aaKnown RBP18.54■□□□□ 0.56
LYSMD4-201ENST00000332728 CRLF3Q8IUI8 442 aa18.54■□□□□ 0.56
LYSMD4-201ENST00000332728 ATPAF2Q8N5M1 289 aa18.54■□□□□ 0.56
LYSMD4-201ENST00000332728 SMC1BQ8NDV3 1235 aa18.54■□□□□ 0.56
LYSMD4-201ENST00000332728 ACBD6Q9BR61 282 aa18.54■□□□□ 0.56
LYSMD4-201ENST00000332728 DENND2DQ9H6A0 471 aaPredicted RBP18.54■□□□□ 0.56
LYSMD4-201ENST00000332728 ACTL7AQ9Y615 435 aa18.54■□□□□ 0.56
LYSMD4-201ENST00000332728 CA12O43570 354 aa18.54■□□□□ 0.56
LYSMD4-201ENST00000332728 TRPA1O75762 1119 aa18.54■□□□□ 0.56
LYSMD4-201ENST00000332728 CNTN5O94779 1100 aa18.54■□□□□ 0.56
LYSMD4-201ENST00000332728 LDB1Q86U70 411 aaPredicted RBP18.54■□□□□ 0.56
LYSMD4-201ENST00000332728 KCNMB4Q86W47 210 aa18.54■□□□□ 0.56
LYSMD4-201ENST00000332728 CHSY1Q86X52 802 aa18.54■□□□□ 0.56
LYSMD4-201ENST00000332728 PABPC5Q96DU9 382 aaKnown RBP18.54■□□□□ 0.56
LYSMD4-201ENST00000332728 PACSIN3Q9UKS6 424 aa18.54■□□□□ 0.56
LYSMD4-201ENST00000332728 RANBP2P49792 3224 aaKnown RBP18.54■□□□□ 0.56
LYSMD4-201ENST00000332728 GYG2O15488 501 aa18.53■□□□□ 0.56
LYSMD4-201ENST00000332728 CSPG5O95196 566 aa18.53■□□□□ 0.56
LYSMD4-201ENST00000332728 VAPBO95292 243 aa18.53■□□□□ 0.56
LYSMD4-201ENST00000332728 CRHR1P34998 444 aa18.53■□□□□ 0.56
LYSMD4-201ENST00000332728 MXRA7P84157 204 aa18.53■□□□□ 0.56
LYSMD4-201ENST00000332728 PSMD5Q16401 504 aa18.53■□□□□ 0.56
LYSMD4-201ENST00000332728 FAM171BQ6P995 826 aa18.53■□□□□ 0.56
LYSMD4-201ENST00000332728 RNF135Q8IUD6 432 aa18.53■□□□□ 0.56
LYSMD4-201ENST00000332728 THEM5Q8N1Q8 247 aa18.53■□□□□ 0.56
LYSMD4-201ENST00000332728 RCOR3Q9P2K3 495 aaPredicted RBP18.53■□□□□ 0.56
LYSMD4-201ENST00000332728 MTF2Q9Y483 593 aaPredicted RBP18.53■□□□□ 0.56
LYSMD4-201ENST00000332728 PTCH2Q9Y6C5 1203 aa18.53■□□□□ 0.56
LYSMD4-201ENST00000332728 ZCWPW2A0A1B0GU75 182 aa18.53■□□□□ 0.56
LYSMD4-201ENST00000332728 PRR5-ARHGAP8B1AHC4 643 aa18.53■□□□□ 0.56
LYSMD4-201ENST00000332728 AURKAO14965 403 aa18.53■□□□□ 0.56
LYSMD4-201ENST00000332728 ARHGAP8P85298 464 aa18.53■□□□□ 0.56
LYSMD4-201ENST00000332728 ESRP1Q6NXG1 681 aaKnown RBP18.53■□□□□ 0.56
LYSMD4-201ENST00000332728 PDZD4Q76G19 769 aaPredicted RBP18.53■□□□□ 0.56
LYSMD4-201ENST00000332728 GIPC2Q8TF65 315 aa18.53■□□□□ 0.56
LYSMD4-201ENST00000332728 LINC01599Q8WXQ3 324 aa18.53■□□□□ 0.56
LYSMD4-201ENST00000332728 OMDQ99983 421 aa18.53■□□□□ 0.56
LYSMD4-201ENST00000332728 LRMDAQ9H2I8 198 aa18.53■□□□□ 0.56
LYSMD4-201ENST00000332728 CHST12Q9NRB3 414 aa18.53■□□□□ 0.56
LYSMD4-201ENST00000332728 GMIPQ9P107 970 aa18.53■□□□□ 0.56
LYSMD4-201ENST00000332728 FIS1Q9Y3D6 152 aa18.53■□□□□ 0.56
LYSMD4-201ENST00000332728 GOLGA8QA0A0J9YX86 632 aa18.52■□□□□ 0.56
LYSMD4-201ENST00000332728 LOC100653049A0A140TA62 436 aa18.52■□□□□ 0.56
LYSMD4-201ENST00000332728 GOLGA8OA6NCC3 632 aa18.52■□□□□ 0.56
LYSMD4-201ENST00000332728 GOLGA8NF8WBI6 632 aa18.52■□□□□ 0.56
LYSMD4-201ENST00000332728 NEMP1O14524 444 aa18.52■□□□□ 0.56
LYSMD4-201ENST00000332728 KRT34O76011 436 aa18.52■□□□□ 0.56
LYSMD4-201ENST00000332728 UPP2O95045 317 aa18.52■□□□□ 0.56
LYSMD4-201ENST00000332728 PRKCGP05129 697 aa18.52■□□□□ 0.56
LYSMD4-201ENST00000332728 OCRLQ01968 901 aa18.52■□□□□ 0.56
LYSMD4-201ENST00000332728 PCLAFQ15004 111 aa18.52■□□□□ 0.56
LYSMD4-201ENST00000332728 CCDC91Q7Z6B0 441 aa18.52■□□□□ 0.56
LYSMD4-201ENST00000332728 KLHDC9Q8NEP7 349 aa18.52■□□□□ 0.56
LYSMD4-201ENST00000332728 TET1Q8NFU7 2136 aa18.52■□□□□ 0.56
LYSMD4-201ENST00000332728 CD99L2Q8TCZ2 262 aa18.52■□□□□ 0.56
LYSMD4-201ENST00000332728 NSMCE1Q8WV22 266 aa18.52■□□□□ 0.56
LYSMD4-201ENST00000332728 SEPT5Q99719 369 aaPredicted RBP18.52■□□□□ 0.56
LYSMD4-201ENST00000332728 GBA3Q9H227 469 aa18.52■□□□□ 0.56
LYSMD4-201ENST00000332728 LRRC40Q9H9A6 602 aa18.52■□□□□ 0.56
LYSMD4-201ENST00000332728 RBM22Q9NW64 420 aaKnown RBP eCLIP18.52■□□□□ 0.56
LYSMD4-201ENST00000332728 IGSF9Q9P2J2 1179 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms