RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 USP33Q8TEY7 942 aa14.29□□□□□ -0.12
TRAIP-201ENST00000331456 GIPC2Q8TF65 315 aa14.29□□□□□ -0.12
TRAIP-201ENST00000331456 ARNTL2Q8WYA1 636 aa14.29□□□□□ -0.12
TRAIP-201ENST00000331456 IGSF21Q96ID5 467 aa14.29□□□□□ -0.12
TRAIP-201ENST00000331456 SERAC1Q96JX3 654 aa14.29□□□□□ -0.12
TRAIP-201ENST00000331456 KLF6Q99612 283 aaPredicted RBP14.29□□□□□ -0.12
TRAIP-201ENST00000331456 GORASP1Q9BQQ3 440 aa14.29□□□□□ -0.12
TRAIP-201ENST00000331456 MLPHQ9BV36 600 aaPredicted RBP14.29□□□□□ -0.12
TRAIP-201ENST00000331456 UBE2OQ9C0C9 1292 aaKnown RBP14.29□□□□□ -0.12
TRAIP-201ENST00000331456 IQCGQ9H095 443 aaKnown RBP14.29□□□□□ -0.12
TRAIP-201ENST00000331456 CRISPLD1Q9H336 500 aa14.29□□□□□ -0.12
TRAIP-201ENST00000331456 CWH43Q9H720 699 aa14.29□□□□□ -0.12
TRAIP-201ENST00000331456 PIH1D1Q9NWS0 290 aaKnown RBP14.29□□□□□ -0.12
TRAIP-201ENST00000331456 MPP6Q9NZW5 540 aa14.29□□□□□ -0.12
TRAIP-201ENST00000331456 TBX21Q9UL17 535 aa14.29□□□□□ -0.12
TRAIP-201ENST00000331456 MAGEB16A2A368 324 aa14.28□□□□□ -0.12
TRAIP-201ENST00000331456 SNX3O60493 162 aa14.28□□□□□ -0.12
TRAIP-201ENST00000331456 MAFKO60675 156 aa14.28□□□□□ -0.12
TRAIP-201ENST00000331456 CSH1P0DML2 217 aa14.28□□□□□ -0.12
TRAIP-201ENST00000331456 CSH2P0DML3 217 aa14.28□□□□□ -0.12
TRAIP-201ENST00000331456 PYGBP11216 843 aa14.28□□□□□ -0.12
TRAIP-201ENST00000331456 ALADP13716 330 aa14.28□□□□□ -0.12
TRAIP-201ENST00000331456 FOXN2P32314 431 aa14.28□□□□□ -0.12
TRAIP-201ENST00000331456 MNX1P50219 401 aaPredicted RBP14.28□□□□□ -0.12
TRAIP-201ENST00000331456 NDST2P52849 883 aa14.28□□□□□ -0.12
TRAIP-201ENST00000331456 CORO7P57737 925 aa14.28□□□□□ -0.12
TRAIP-201ENST00000331456 RING1Q06587 406 aa14.28□□□□□ -0.12
TRAIP-201ENST00000331456 MS4A13Q5J8X5 152 aa14.28□□□□□ -0.12
TRAIP-201ENST00000331456 ARHGAP36Q6ZRI8 547 aa14.28□□□□□ -0.12
TRAIP-201ENST00000331456 OXNAD1Q96HP4 312 aaPredicted RBP14.28□□□□□ -0.12
TRAIP-201ENST00000331456 IL12RB2Q99665 862 aa14.28□□□□□ -0.12
TRAIP-201ENST00000331456 PLCD4Q9BRC7 762 aa14.28□□□□□ -0.12
TRAIP-201ENST00000331456 TRIM56Q9BRZ2 755 aaKnown RBP14.28□□□□□ -0.12
TRAIP-201ENST00000331456 TTLL2Q9BWV7 592 aa14.28□□□□□ -0.12
TRAIP-201ENST00000331456 MAGED2Q9UNF1 606 aaPredicted RBP14.28□□□□□ -0.12
TRAIP-201ENST00000331456 USP15Q9Y4E8 981 aaPredicted RBP14.28□□□□□ -0.12
TRAIP-201ENST00000331456 COPEO14579 308 aa14.27□□□□□ -0.12
TRAIP-201ENST00000331456 TBX18O95935 607 aa14.27□□□□□ -0.12
TRAIP-201ENST00000331456 EFEMP2O95967 443 aa14.27□□□□□ -0.12
TRAIP-201ENST00000331456 ZDHHC11BP0C7U3 371 aa14.27□□□□□ -0.12
TRAIP-201ENST00000331456 OR1D2P34982 312 aa14.27□□□□□ -0.12
TRAIP-201ENST00000331456 MGAT5Q09328 741 aa14.27□□□□□ -0.12
TRAIP-201ENST00000331456 ZKSCAN8Q15776 578 aaPredicted RBP14.27□□□□□ -0.12
TRAIP-201ENST00000331456 UMODL1-AS1Q8N2C9 162 aa14.27□□□□□ -0.12
TRAIP-201ENST00000331456 PDZD8Q8NEN9 1154 aa14.27□□□□□ -0.12
TRAIP-201ENST00000331456 ZSCAN18Q8TBC5 510 aaPredicted RBP14.27□□□□□ -0.12
TRAIP-201ENST00000331456 FCRL5Q96RD9 977 aa14.27□□□□□ -0.12
TRAIP-201ENST00000331456 PITPNM3Q9BZ71 974 aa14.27□□□□□ -0.12
TRAIP-201ENST00000331456 GLOD4Q9HC38 313 aa14.27□□□□□ -0.12
TRAIP-201ENST00000331456 PRDM5Q9NQX1 630 aaPredicted RBP14.27□□□□□ -0.12
TRAIP-201ENST00000331456 RPS6KL1Q9Y6S9 549 aa14.27□□□□□ -0.12
TRAIP-201ENST00000331456 MICAL3Q7RTP6 2002 aa14.27□□□□□ -0.12
TRAIP-201ENST00000331456 MYO18AQ92614 2054 aaKnown RBP14.27□□□□□ -0.13
TRAIP-201ENST00000331456 ABHD14A-ACY1A0A1B0GW23 586 aa14.27□□□□□ -0.13
TRAIP-201ENST00000331456 CACNG3O60359 315 aa14.27□□□□□ -0.13
TRAIP-201ENST00000331456 TLR5O60602 858 aa14.27□□□□□ -0.13
TRAIP-201ENST00000331456 USP12O75317 370 aa14.27□□□□□ -0.13
TRAIP-201ENST00000331456 HMBSP08397 361 aa14.27□□□□□ -0.13
TRAIP-201ENST00000331456 PAPOLAP51003 745 aaKnown RBP14.27□□□□□ -0.13
TRAIP-201ENST00000331456 GEMP55040 296 aa14.27□□□□□ -0.13
TRAIP-201ENST00000331456 NIPAL4Q0D2K0 466 aa14.27□□□□□ -0.13
TRAIP-201ENST00000331456 CDH17Q12864 832 aa14.27□□□□□ -0.13
TRAIP-201ENST00000331456 DNAJC3Q13217 504 aa14.27□□□□□ -0.13
TRAIP-201ENST00000331456 ARTNQ5T4W7 220 aa14.27□□□□□ -0.13
TRAIP-201ENST00000331456 SPATA21Q7Z572 469 aa14.27□□□□□ -0.13
TRAIP-201ENST00000331456 ZNF683Q8IZ20 524 aa14.27□□□□□ -0.13
TRAIP-201ENST00000331456 CNTD1Q8N815 330 aa14.27□□□□□ -0.13
TRAIP-201ENST00000331456 OVCA2Q8WZ82 227 aa14.27□□□□□ -0.13
TRAIP-201ENST00000331456 ZNF558Q96NG5 402 aa14.27□□□□□ -0.13
TRAIP-201ENST00000331456 IL22Q9GZX6 179 aa14.27□□□□□ -0.13
TRAIP-201ENST00000331456 TMEM248Q9NWD8 314 aa14.27□□□□□ -0.13
TRAIP-201ENST00000331456 TXNDC16Q9P2K2 825 aa14.27□□□□□ -0.13
TRAIP-201ENST00000331456 AFF4Q9UHB7 1163 aaKnown RBP14.27□□□□□ -0.13
TRAIP-201ENST00000331456 HBS1LQ9Y450 684 aaKnown RBP14.27□□□□□ -0.13
TRAIP-201ENST00000331456 CARNS1A5YM72 827 aa14.26□□□□□ -0.13
TRAIP-201ENST00000331456 UGT1A9O60656 530 aa14.26□□□□□ -0.13
TRAIP-201ENST00000331456 IGLV3-27P01718 113 aa14.26□□□□□ -0.13
TRAIP-201ENST00000331456 CLTBP09497 229 aa14.26□□□□□ -0.13
TRAIP-201ENST00000331456 ATF6P18850 670 aa14.26□□□□□ -0.13
TRAIP-201ENST00000331456 NEK3P51956 506 aa14.26□□□□□ -0.13
TRAIP-201ENST00000331456 FRG1Q14331 258 aaKnown RBP14.26□□□□□ -0.13
TRAIP-201ENST00000331456 SH2D5Q6ZV89 423 aa14.26□□□□□ -0.13
TRAIP-201ENST00000331456 OTOP3Q7RTS5 596 aa14.26□□□□□ -0.13
TRAIP-201ENST00000331456 RASSF3Q86WH2 238 aa14.26□□□□□ -0.13
TRAIP-201ENST00000331456 KLHDC8BQ8IXV7 354 aa14.26□□□□□ -0.13
TRAIP-201ENST00000331456 RNF168Q8IYW5 571 aaPredicted RBP14.26□□□□□ -0.13
TRAIP-201ENST00000331456 ZNF276Q8N554 614 aa14.26□□□□□ -0.13
TRAIP-201ENST00000331456 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.26□□□□□ -0.13
TRAIP-201ENST00000331456 VPS11Q9H270 941 aa14.26□□□□□ -0.13
TRAIP-201ENST00000331456 UGT1A7Q9HAW7 530 aa14.26□□□□□ -0.13
TRAIP-201ENST00000331456 UGT1A10Q9HAW8 530 aa14.26□□□□□ -0.13
TRAIP-201ENST00000331456 UGT1A8Q9HAW9 530 aa14.26□□□□□ -0.13
TRAIP-201ENST00000331456 NDFIP2Q9NV92 336 aa14.26□□□□□ -0.13
TRAIP-201ENST00000331456 RBM22Q9NW64 420 aaKnown RBP eCLIP14.26□□□□□ -0.13
TRAIP-201ENST00000331456 ZFATQ9P243 1243 aa14.26□□□□□ -0.13
TRAIP-201ENST00000331456 HSFX1Q9UBD0 423 aa14.26□□□□□ -0.13
TRAIP-201ENST00000331456 IPO11Q9UI26 975 aaKnown RBP14.26□□□□□ -0.13
TRAIP-201ENST00000331456 SHROOM3Q8TF72 1996 aa14.26□□□□□ -0.13
TRAIP-201ENST00000331456 IGLV3-10A0A075B6K4 115 aa14.25□□□□□ -0.13
TRAIP-201ENST00000331456 FAM237BA0A1B0GVD1 139 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms