RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 RPL17P18621 184 aaKnown RBP16.21■□□□□ 0.19
PGBD2-201ENST00000329291 CCNCP24863 283 aa16.21■□□□□ 0.19
PGBD2-201ENST00000329291 TBX4P57082 545 aa16.21■□□□□ 0.19
PGBD2-201ENST00000329291 PSMD5Q16401 504 aa16.21■□□□□ 0.19
PGBD2-201ENST00000329291 AFMIDQ63HM1 303 aa16.21■□□□□ 0.19
PGBD2-201ENST00000329291 CNKSR3Q6P9H4 555 aa16.21■□□□□ 0.19
PGBD2-201ENST00000329291 MIB1Q86YT6 1006 aa16.21■□□□□ 0.19
PGBD2-201ENST00000329291 TTC17Q96AE7 1141 aa16.21■□□□□ 0.19
PGBD2-201ENST00000329291 VN1R3Q9BXE9 311 aa16.21■□□□□ 0.19
PGBD2-201ENST00000329291 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.21■□□□□ 0.19
PGBD2-201ENST00000329291 TBX21Q9UL17 535 aa16.21■□□□□ 0.19
PGBD2-201ENST00000329291 CNTN5O94779 1100 aa16.21■□□□□ 0.18
PGBD2-201ENST00000329291 TOP3BO95985 862 aaKnown RBP16.21■□□□□ 0.18
PGBD2-201ENST00000329291 HAPLN1P10915 354 aaPredicted RBP16.21■□□□□ 0.18
PGBD2-201ENST00000329291 MAGEA9P43362 315 aa16.21■□□□□ 0.18
PGBD2-201ENST00000329291 MS4A13Q5J8X5 152 aa16.21■□□□□ 0.18
PGBD2-201ENST00000329291 CCDC63Q8NA47 563 aa16.21■□□□□ 0.18
PGBD2-201ENST00000329291 LRRC8CQ8TDW0 803 aa16.21■□□□□ 0.18
PGBD2-201ENST00000329291 DIS3LQ8TF46 1054 aaKnown RBP16.21■□□□□ 0.18
PGBD2-201ENST00000329291 C1orf74Q96LT6 269 aa16.21■□□□□ 0.18
PGBD2-201ENST00000329291 RMDN2Q96LZ7 410 aa16.21■□□□□ 0.18
PGBD2-201ENST00000329291 SRPK1Q96SB4 655 aaKnown RBP16.21■□□□□ 0.18
PGBD2-201ENST00000329291 VAT1Q99536 393 aa16.21■□□□□ 0.18
PGBD2-201ENST00000329291 TTPALQ9BTX7 342 aa16.21■□□□□ 0.18
PGBD2-201ENST00000329291 SLC13A1Q9BZW2 595 aa16.21■□□□□ 0.18
PGBD2-201ENST00000329291 CDY1Q9Y6F8 540 aa16.21■□□□□ 0.18
PGBD2-201ENST00000329291 RPS6KL1Q9Y6S9 549 aa16.21■□□□□ 0.18
PGBD2-201ENST00000329291 MYO16Q9Y6X6 1858 aa16.21■□□□□ 0.18
PGBD2-201ENST00000329291 FGF10O15520 208 aaPredicted RBP16.2■□□□□ 0.18
PGBD2-201ENST00000329291 CACNG3O60359 315 aa16.2■□□□□ 0.18
PGBD2-201ENST00000329291 EDF1O60869 148 aaKnown RBP16.2■□□□□ 0.18
PGBD2-201ENST00000329291 HMBSP08397 361 aa16.2■□□□□ 0.18
PGBD2-201ENST00000329291 RFC2P35250 354 aa16.2■□□□□ 0.18
PGBD2-201ENST00000329291 PAPOLAP51003 745 aaKnown RBP16.2■□□□□ 0.18
PGBD2-201ENST00000329291 LACTB2Q53H82 288 aaPredicted RBP16.2■□□□□ 0.18
PGBD2-201ENST00000329291 ANKS3Q6ZW76 656 aa16.2■□□□□ 0.18
PGBD2-201ENST00000329291 TRPM8Q7Z2W7 1104 aa16.2■□□□□ 0.18
PGBD2-201ENST00000329291 ATPAF2Q8N5M1 289 aa16.2■□□□□ 0.18
PGBD2-201ENST00000329291 RTL3Q8N8U3 475 aaKnown RBP16.2■□□□□ 0.18
PGBD2-201ENST00000329291 MYEOVQ96EZ4 313 aa16.2■□□□□ 0.18
PGBD2-201ENST00000329291 OXCT2Q9BYC2 517 aaPredicted RBP16.2■□□□□ 0.18
PGBD2-201ENST00000329291 KDM4CQ9H3R0 1056 aa16.2■□□□□ 0.18
PGBD2-201ENST00000329291 CATSPERBQ9H7T0 1116 aa16.2■□□□□ 0.18
PGBD2-201ENST00000329291 MT-CYBP00156 380 aaPredicted RBP16.19■□□□□ 0.18
PGBD2-201ENST00000329291 CLTBP09497 229 aa16.19■□□□□ 0.18
PGBD2-201ENST00000329291 ATF6P18850 670 aa16.19■□□□□ 0.18
PGBD2-201ENST00000329291 ALDH7A1P49419 539 aaKnown RBP16.19■□□□□ 0.18
PGBD2-201ENST00000329291 COG7P83436 770 aa16.19■□□□□ 0.18
PGBD2-201ENST00000329291 NRG1Q02297 640 aaPredicted RBP16.19■□□□□ 0.18
PGBD2-201ENST00000329291 ACTN3Q08043 901 aaPredicted RBP16.19■□□□□ 0.18
PGBD2-201ENST00000329291 SMARCB1Q12824 385 aa16.19■□□□□ 0.18
PGBD2-201ENST00000329291 SEPT7Q16181 437 aaKnown RBP16.19■□□□□ 0.18
PGBD2-201ENST00000329291 ALFQ53S48 1182 aa16.19■□□□□ 0.18
PGBD2-201ENST00000329291 C10orf120Q5SQS8 335 aa16.19■□□□□ 0.18
PGBD2-201ENST00000329291 ITPRIPL1Q6GPH6 555 aa16.19■□□□□ 0.18
PGBD2-201ENST00000329291 FBXO46Q6PJ61 603 aaPredicted RBP16.19■□□□□ 0.18
PGBD2-201ENST00000329291 MARK2Q7KZI7 788 aaKnown RBP16.19■□□□□ 0.18
PGBD2-201ENST00000329291 TFAP2DQ7Z6R9 452 aa16.19■□□□□ 0.18
PGBD2-201ENST00000329291 TMCO2Q7Z6W1 182 aaPredicted RBP16.19■□□□□ 0.18
PGBD2-201ENST00000329291 ARHGAP18Q8N392 663 aa16.19■□□□□ 0.18
PGBD2-201ENST00000329291 DNAAF3Q8N9W5 541 aa16.19■□□□□ 0.18
PGBD2-201ENST00000329291 IL12RB2Q99665 862 aa16.19■□□□□ 0.18
PGBD2-201ENST00000329291 CCSER2Q9H7U1 834 aa16.19■□□□□ 0.18
PGBD2-201ENST00000329291 CHRAC1Q9NRG0 131 aa16.19■□□□□ 0.18
PGBD2-201ENST00000329291 PLXNA3P51805 1871 aa16.19■□□□□ 0.18
PGBD2-201ENST00000329291 ZCWPW2A0A1B0GU75 182 aa16.19■□□□□ 0.18
PGBD2-201ENST00000329291 COPEO14579 308 aa16.19■□□□□ 0.18
PGBD2-201ENST00000329291 MATN3O15232 486 aa16.19■□□□□ 0.18
PGBD2-201ENST00000329291 ATP9BO43861 1147 aa16.19■□□□□ 0.18
PGBD2-201ENST00000329291 KRT38O76015 456 aa16.19■□□□□ 0.18
PGBD2-201ENST00000329291 EFEMP2O95967 443 aa16.19■□□□□ 0.18
PGBD2-201ENST00000329291 HTR7P34969 479 aa16.19■□□□□ 0.18
PGBD2-201ENST00000329291 LGSNQ5TDP6 509 aa16.19■□□□□ 0.18
PGBD2-201ENST00000329291 PACS1Q6VY07 963 aa16.19■□□□□ 0.18
PGBD2-201ENST00000329291 OTOAQ7RTW8 1153 aa16.19■□□□□ 0.18
PGBD2-201ENST00000329291 TMEM135Q86UB9 458 aa16.19■□□□□ 0.18
PGBD2-201ENST00000329291 CCNJLQ8IV13 435 aa16.19■□□□□ 0.18
PGBD2-201ENST00000329291 MICALL1Q8N3F8 863 aa16.19■□□□□ 0.18
PGBD2-201ENST00000329291 LZTR1Q8N653 840 aa16.19■□□□□ 0.18
PGBD2-201ENST00000329291 ANKLE1Q8NAG6 615 aa16.19■□□□□ 0.18
PGBD2-201ENST00000329291 SPPL2BQ8TCT7 592 aa16.19■□□□□ 0.18
PGBD2-201ENST00000329291 IGSF8Q969P0 613 aa16.19■□□□□ 0.18
PGBD2-201ENST00000329291 MFSD3Q96ES6 412 aa16.19■□□□□ 0.18
PGBD2-201ENST00000329291 SPATA17Q96L03 361 aa16.19■□□□□ 0.18
PGBD2-201ENST00000329291 VPS11Q9H270 941 aa16.19■□□□□ 0.18
PGBD2-201ENST00000329291 PRDM5Q9NQX1 630 aaPredicted RBP16.19■□□□□ 0.18
PGBD2-201ENST00000329291 CLIC5Q9NZA1 410 aa16.19■□□□□ 0.18
PGBD2-201ENST00000329291 ARL2BPQ9Y2Y0 163 aa16.19■□□□□ 0.18
PGBD2-201ENST00000329291 PLLPQ9Y342 182 aa16.19■□□□□ 0.18
PGBD2-201ENST00000329291 STARD13Q9Y3M8 1113 aa16.19■□□□□ 0.18
PGBD2-201ENST00000329291 FSBPO95073 299 aa16.18■□□□□ 0.18
PGBD2-201ENST00000329291 POLBP06746 335 aa16.18■□□□□ 0.18
PGBD2-201ENST00000329291 ALADP13716 330 aa16.18■□□□□ 0.18
PGBD2-201ENST00000329291 CCNFP41002 786 aa16.18■□□□□ 0.18
PGBD2-201ENST00000329291 SCTRP47872 440 aa16.18■□□□□ 0.18
PGBD2-201ENST00000329291 ZNF33AQ06730 810 aa16.18■□□□□ 0.18
PGBD2-201ENST00000329291 KLHDC8BQ8IXV7 354 aa16.18■□□□□ 0.18
PGBD2-201ENST00000329291 FBXO22Q8NEZ5 403 aa16.18■□□□□ 0.18
PGBD2-201ENST00000329291 ZNF778Q96MU6 729 aa16.18■□□□□ 0.18
PGBD2-201ENST00000329291 NAT9Q9BTE0 207 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms