RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 HNF1BP35680 557 aa24■■□□□ 1.43
TMEM54-201ENST00000329151 PITX1P78337 314 aaPredicted RBP24■■□□□ 1.43
TMEM54-201ENST00000329151 PRAMEF14Q5SWL7 426 aa24■■□□□ 1.43
TMEM54-201ENST00000329151 CCDC114Q96M63 670 aa24■■□□□ 1.43
TMEM54-201ENST00000329151 CPXM1Q96SM3 734 aa24■■□□□ 1.43
TMEM54-201ENST00000329151 MUC3BQ9H195 1237 aa24■■□□□ 1.43
TMEM54-201ENST00000329151 VANGL2Q9ULK5 521 aa24■■□□□ 1.43
TMEM54-201ENST00000329151 ENC1O14682 589 aa23.99■■□□□ 1.43
TMEM54-201ENST00000329151 SLC7A4O43246 635 aa23.99■■□□□ 1.43
TMEM54-201ENST00000329151 CDK4P11802 303 aa23.99■■□□□ 1.43
TMEM54-201ENST00000329151 NUDT1P36639 197 aa23.99■■□□□ 1.43
TMEM54-201ENST00000329151 PLK1P53350 603 aa23.99■■□□□ 1.43
TMEM54-201ENST00000329151 NAPEPLDQ6IQ20 393 aa23.99■■□□□ 1.43
TMEM54-201ENST00000329151 FBXL22Q6P050 247 aa23.99■■□□□ 1.43
TMEM54-201ENST00000329151 DHRS13Q6UX07 377 aa23.99■■□□□ 1.43
TMEM54-201ENST00000329151 PDCD7Q8N8D1 485 aaKnown RBP23.99■■□□□ 1.43
TMEM54-201ENST00000329151 CNDP2Q96KP4 475 aaKnown RBP23.99■■□□□ 1.43
TMEM54-201ENST00000329151 SLC2A13Q96QE2 648 aa23.99■■□□□ 1.43
TMEM54-201ENST00000329151 PRMT1Q99873 361 aaKnown RBP23.99■■□□□ 1.43
TMEM54-201ENST00000329151 KDM4CQ9H3R0 1056 aa23.99■■□□□ 1.43
TMEM54-201ENST00000329151 RAXQ9Y2V3 346 aa23.99■■□□□ 1.43
TMEM54-201ENST00000329151 PAXBP1Q9Y5B6 917 aa23.99■■□□□ 1.43
TMEM54-201ENST00000329151 FAM149AA5PLN7 773 aa23.98■■□□□ 1.43
TMEM54-201ENST00000329151 TRABD2BA6NFA1 517 aa23.98■■□□□ 1.43
TMEM54-201ENST00000329151 TLR4O00206 839 aa23.98■■□□□ 1.43
TMEM54-201ENST00000329151 CLDN11O75508 207 aa23.98■■□□□ 1.43
TMEM54-201ENST00000329151 CENPCQ03188 943 aa23.98■■□□□ 1.43
TMEM54-201ENST00000329151 CCDC15Q0P6D6 951 aa23.98■■□□□ 1.43
TMEM54-201ENST00000329151 AUHQ13825 339 aaKnown RBP23.98■■□□□ 1.43
TMEM54-201ENST00000329151 KCNJ12Q14500 433 aa23.98■■□□□ 1.43
TMEM54-201ENST00000329151 FAM183BPQ6ZVS7 135 aa23.98■■□□□ 1.43
TMEM54-201ENST00000329151 C1orf131Q8NDD1 294 aaKnown RBP23.98■■□□□ 1.43
TMEM54-201ENST00000329151 SIK2Q9H0K1 926 aa23.98■■□□□ 1.43
TMEM54-201ENST00000329151 KIAA1468Q9P260 1216 aa23.98■■□□□ 1.43
TMEM54-201ENST00000329151 PCDHGC3Q9UN70 934 aa23.98■■□□□ 1.43
TMEM54-201ENST00000329151 GPSM3Q9Y4H4 160 aa23.98■■□□□ 1.43
TMEM54-201ENST00000329151 BAHCC1Q9P281 2608 aa23.98■■□□□ 1.43
TMEM54-201ENST00000329151 GTPBP10A4D1E9 387 aaKnown RBP23.97■■□□□ 1.43
TMEM54-201ENST00000329151 BECN2A8MW95 431 aa23.97■■□□□ 1.43
TMEM54-201ENST00000329151 M0QYT0 321 aa23.97■■□□□ 1.43
TMEM54-201ENST00000329151 DAB1O75553 588 aa23.97■■□□□ 1.43
TMEM54-201ENST00000329151 DKK1O94907 266 aa23.97■■□□□ 1.43
TMEM54-201ENST00000329151 WNT1P04628 370 aa23.97■■□□□ 1.43
TMEM54-201ENST00000329151 CAPNS1P04632 268 aa23.97■■□□□ 1.43
TMEM54-201ENST00000329151 VAV1P15498 845 aa23.97■■□□□ 1.43
TMEM54-201ENST00000329151 COL5A1P20908 1838 aaPredicted RBP23.97■■□□□ 1.43
TMEM54-201ENST00000329151 MAT2AP31153 395 aaKnown RBP23.97■■□□□ 1.43
TMEM54-201ENST00000329151 NOS2P35228 1153 aa23.97■■□□□ 1.43
TMEM54-201ENST00000329151 BPIFB4P59827 614 aa23.97■■□□□ 1.43
TMEM54-201ENST00000329151 KRT83P78385 493 aa23.97■■□□□ 1.43
TMEM54-201ENST00000329151 CYP4F3Q08477 520 aa23.97■■□□□ 1.43
TMEM54-201ENST00000329151 STAT4Q14765 748 aa23.97■■□□□ 1.43
TMEM54-201ENST00000329151 SMAD1Q15797 465 aaKnown RBP23.97■■□□□ 1.43
TMEM54-201ENST00000329151 CAMK4Q16566 473 aa23.97■■□□□ 1.43
TMEM54-201ENST00000329151 SETMARQ53H47 684 aaPredicted RBP23.97■■□□□ 1.43
TMEM54-201ENST00000329151 TMPRSS12Q86WS5 348 aa23.97■■□□□ 1.43
TMEM54-201ENST00000329151 FAM114A1Q8IWE2 563 aa23.97■■□□□ 1.43
TMEM54-201ENST00000329151 EID2Q8N6I1 236 aa23.97■■□□□ 1.43
TMEM54-201ENST00000329151 SHC3Q92529 594 aa23.97■■□□□ 1.43
TMEM54-201ENST00000329151 FEM1AQ9BSK4 669 aa23.97■■□□□ 1.43
TMEM54-201ENST00000329151 EBF2Q9HAK2 575 aa23.97■■□□□ 1.43
TMEM54-201ENST00000329151 DYRK4Q9NR20 520 aa23.97■■□□□ 1.43
TMEM54-201ENST00000329151 RRN3Q9NYV6 651 aa23.97■■□□□ 1.43
TMEM54-201ENST00000329151 STAP1Q9ULZ2 295 aa23.97■■□□□ 1.43
TMEM54-201ENST00000329151 DMTF1Q9Y222 760 aa23.97■■□□□ 1.43
TMEM54-201ENST00000329151 PCDHGA1Q9Y5H4 931 aa23.97■■□□□ 1.43
TMEM54-201ENST00000329151 NBEAQ8NFP9 2946 aa23.96■■□□□ 1.43
TMEM54-201ENST00000329151 ITPR1Q14643 2758 aa23.96■■□□□ 1.43
TMEM54-201ENST00000329151 ALOX15BO15296 676 aa23.96■■□□□ 1.43
TMEM54-201ENST00000329151 RFPL3O75679 317 aa23.96■■□□□ 1.43
TMEM54-201ENST00000329151 JUPP14923 745 aa23.96■■□□□ 1.43
TMEM54-201ENST00000329151 SLC6A3Q01959 620 aa23.96■■□□□ 1.43
TMEM54-201ENST00000329151 DLG2Q15700 870 aa23.96■■□□□ 1.43
TMEM54-201ENST00000329151 COL28A1Q2UY09 1125 aa23.96■■□□□ 1.43
TMEM54-201ENST00000329151 POM121L1PQ3SYA9 428 aa23.96■■□□□ 1.43
TMEM54-201ENST00000329151 HS1BP3Q53T59 392 aa23.96■■□□□ 1.43
TMEM54-201ENST00000329151 CXorf57Q6NSI4 855 aaKnown RBP23.96■■□□□ 1.43
TMEM54-201ENST00000329151 LRRC31Q6UY01 552 aa23.96■■□□□ 1.43
TMEM54-201ENST00000329151 ZDHHC17Q8IUH5 632 aa23.96■■□□□ 1.43
TMEM54-201ENST00000329151 MFSD2AQ8NA29 543 aa23.96■■□□□ 1.43
TMEM54-201ENST00000329151 HNRNPLLQ8WVV9 542 aaKnown RBP23.96■■□□□ 1.43
TMEM54-201ENST00000329151 C2orf49Q9BVC5 232 aaPredicted RBP23.96■■□□□ 1.43
TMEM54-201ENST00000329151 E9PAM4 449 aa23.95■■□□□ 1.42
TMEM54-201ENST00000329151 PES1O00541 588 aaKnown RBP23.95■■□□□ 1.42
TMEM54-201ENST00000329151 RTN2O75298 545 aa23.95■■□□□ 1.42
TMEM54-201ENST00000329151 PAGE1O75459 146 aa23.95■■□□□ 1.42
TMEM54-201ENST00000329151 RHOCP08134 193 aa23.95■■□□□ 1.42
TMEM54-201ENST00000329151 C1SP09871 688 aa23.95■■□□□ 1.42
TMEM54-201ENST00000329151 PON1P27169 355 aa23.95■■□□□ 1.42
TMEM54-201ENST00000329151 EPHA8P29322 1005 aaPredicted RBP23.95■■□□□ 1.42
TMEM54-201ENST00000329151 DRD3P35462 400 aa23.95■■□□□ 1.42
TMEM54-201ENST00000329151 ANP32AP39687 249 aaKnown RBP23.95■■□□□ 1.42
TMEM54-201ENST00000329151 CDH4P55283 916 aa23.95■■□□□ 1.42
TMEM54-201ENST00000329151 NXPH1P58417 271 aa23.95■■□□□ 1.42
TMEM54-201ENST00000329151 RNASE9P60153 205 aaKnown RBP23.95■■□□□ 1.42
TMEM54-201ENST00000329151 PPP2CBP62714 309 aa23.95■■□□□ 1.42
TMEM54-201ENST00000329151 PPP2CAP67775 309 aa23.95■■□□□ 1.42
TMEM54-201ENST00000329151 COL9A2Q14055 689 aaPredicted RBP23.95■■□□□ 1.42
TMEM54-201ENST00000329151 C6orf118Q5T5N4 469 aa23.95■■□□□ 1.42
TMEM54-201ENST00000329151 Q6ZVU0 165 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms