RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 TBC1D30Q9Y2I9 924 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 SNTNA6NMZ2 147 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 ADH1CP00326 375 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 RFC2P35250 354 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 CCNG1P51959 295 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 PAGE2BQ5JRK9 111 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 SLC26A9Q7LBE3 791 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 TFAP2DQ7Z6R9 452 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 TIFAQ96CG3 184 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 ARFGEF2Q9Y6D5 1785 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 MAGEC1O60732 1142 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 PEX5P50542 639 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 YBEYP58557 167 aaPredicted RBP11.62□□□□□ -0.55
COL4A5-201ENST00000328300 CSHL1Q14406 222 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 RASGEF1CQ8N431 466 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 TDRD5Q8NAT2 981 aaKnown RBP11.62□□□□□ -0.55
COL4A5-201ENST00000328300 FBXO22Q8NEZ5 403 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 MMADHCQ9H3L0 296 aaPredicted RBP11.62□□□□□ -0.55
COL4A5-201ENST00000328300 EIF4E1BA6NMX2 242 aaKnown RBP11.62□□□□□ -0.55
COL4A5-201ENST00000328300 AIM2O14862 343 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 ADRA1DP25100 572 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 SERPINB10P48595 397 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 POU6F1Q14863 301 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 KCNA10Q16322 511 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 ARHGAP17Q68EM7 881 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 OTOAQ7RTW8 1153 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 HORMAD1Q86X24 394 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 FUBP3Q96I24 572 aaKnown RBP eCLIP11.62□□□□□ -0.55
COL4A5-201ENST00000328300 KIAA1522Q9P206 1035 aaPredicted RBP11.62□□□□□ -0.55
COL4A5-201ENST00000328300 SPASTQ9UBP0 616 aa11.62□□□□□ -0.55
COL4A5-201ENST00000328300 MRPS23Q9Y3D9 190 aaKnown RBP11.62□□□□□ -0.55
COL4A5-201ENST00000328300 HBS1LQ9Y450 684 aaKnown RBP11.62□□□□□ -0.55
COL4A5-201ENST00000328300 MAP3K13O43283 966 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 CXCR2P25025 360 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 CNGA3Q16281 694 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 ZC3H12AQ5D1E8 599 aaKnown RBP11.61□□□□□ -0.55
COL4A5-201ENST00000328300 ZNF470Q6ECI4 717 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 PTAR1Q7Z6K3 402 aaPredicted RBP11.61□□□□□ -0.55
COL4A5-201ENST00000328300 ANKRD27Q96NW4 1050 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 PPP1R10Q96QC0 940 aaKnown RBP11.61□□□□□ -0.55
COL4A5-201ENST00000328300 SEMA4AQ9H3S1 761 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 NUP188Q5SRE5 1749 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 AKAP10O43572 662 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 CYP2A13Q16696 494 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 TADA1Q96BN2 335 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 SLC9A7Q96T83 725 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 GMLQ99445 158 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 BATF3Q9NR55 127 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 COL20A1Q9P218 1284 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 PADI3Q9ULW8 664 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 DNAJC16Q9Y2G8 782 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 COQ4Q9Y3A0 265 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 MDM4O15151 490 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 ITGB6P18564 788 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 JAM2P57087 298 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 NCALDP61601 193 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 NEPROQ6NW34 567 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 BNC2Q6ZN30 1099 aaPredicted RBP11.61□□□□□ -0.55
COL4A5-201ENST00000328300 CYP4Z1Q86W10 505 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 MLPHQ9BV36 600 aaPredicted RBP11.61□□□□□ -0.55
COL4A5-201ENST00000328300 SCN11AQ9UI33 1791 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 A0A096LPK6 155 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 CATP04040 527 aaKnown RBP11.61□□□□□ -0.55
COL4A5-201ENST00000328300 NUDT17P0C025 328 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 CCNB1P14635 433 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 N4BP2L1Q5TBK1 243 aaPredicted RBP11.61□□□□□ -0.55
COL4A5-201ENST00000328300 TRIM69Q86WT6 500 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 PHACTR4Q8IZ21 702 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 SLC4A11Q8NBS3 891 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 DEFB118Q96PH6 123 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 FAM126AQ9BYI3 521 aaPredicted RBP11.61□□□□□ -0.55
COL4A5-201ENST00000328300 NXF3Q9H4D5 531 aaKnown RBP11.61□□□□□ -0.55
COL4A5-201ENST00000328300 ARMC7Q9H6L4 198 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 KCTD5Q9NXV2 234 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 MGAT4DA6NG13 374 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 UBDO15205 165 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 TSPAN3O60637 253 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 PCDH8O95206 1070 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 TPSB2P20231 275 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 PRIM2P49643 509 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 IRX1P78414 480 aaPredicted RBP11.61□□□□□ -0.55
COL4A5-201ENST00000328300 TPSAB1Q15661 275 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 MPPE1Q53F39 396 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 ZNF655Q8N720 491 aaPredicted RBP11.61□□□□□ -0.55
COL4A5-201ENST00000328300 VPS33AQ96AX1 596 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 ACTR8Q9H981 624 aa11.61□□□□□ -0.55
COL4A5-201ENST00000328300 RBM47A0AV96 593 aaKnown RBP11.6□□□□□ -0.55
COL4A5-201ENST00000328300 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.6□□□□□ -0.55
COL4A5-201ENST00000328300 FKBP9O95302 570 aa11.6□□□□□ -0.55
COL4A5-201ENST00000328300 ATP6V0D1P61421 351 aa11.6□□□□□ -0.55
COL4A5-201ENST00000328300 FLOT2Q14254 428 aa11.6□□□□□ -0.55
COL4A5-201ENST00000328300 FKBP9P1Q75LS8 142 aa11.6□□□□□ -0.55
COL4A5-201ENST00000328300 EME1Q96AY2 570 aa11.6□□□□□ -0.55
COL4A5-201ENST00000328300 SUFUQ9UMX1 484 aa11.6□□□□□ -0.55
COL4A5-201ENST00000328300 CRYBG1Q9Y4K1 1723 aa11.6□□□□□ -0.55
COL4A5-201ENST00000328300 INSCQ1MX18 579 aa11.6□□□□□ -0.55
COL4A5-201ENST00000328300 TXNDC11Q6PKC3 985 aa11.6□□□□□ -0.55
COL4A5-201ENST00000328300 DTX3LQ8TDB6 740 aa11.6□□□□□ -0.55
COL4A5-201ENST00000328300 ZNF384Q8TF68 577 aa11.6□□□□□ -0.55
COL4A5-201ENST00000328300 TMEM175Q9BSA9 504 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms