RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 KIAA0355O15063 1070 aa15.26■□□□□ 0.03
TPM3-205ENST00000328159 PSMD3O43242 534 aa15.26■□□□□ 0.03
TPM3-205ENST00000328159 TYROBPO43914 113 aa15.26■□□□□ 0.03
TPM3-205ENST00000328159 EFCAB14O75071 495 aa15.26■□□□□ 0.03
TPM3-205ENST00000328159 MT-ND3P03897 115 aa15.26■□□□□ 0.03
TPM3-205ENST00000328159 CA4P22748 312 aa15.26■□□□□ 0.03
TPM3-205ENST00000328159 NDST2P52849 883 aa15.26■□□□□ 0.03
TPM3-205ENST00000328159 WDR4P57081 412 aaKnown RBP15.26■□□□□ 0.03
TPM3-205ENST00000328159 OLIG2Q13516 323 aa15.26■□□□□ 0.03
TPM3-205ENST00000328159 ACBD5Q5T8D3 534 aaPredicted RBP15.26■□□□□ 0.03
TPM3-205ENST00000328159 TTC39BQ5VTQ0 682 aaPredicted RBP15.26■□□□□ 0.03
TPM3-205ENST00000328159 TIGD7Q6NT04 549 aaPredicted RBP15.26■□□□□ 0.03
TPM3-205ENST00000328159 FBXL22Q6P050 247 aa15.26■□□□□ 0.03
TPM3-205ENST00000328159 OVCA2Q8WZ82 227 aa15.26■□□□□ 0.03
TPM3-205ENST00000328159 NOL6Q9H6R4 1146 aaKnown RBP15.26■□□□□ 0.03
TPM3-205ENST00000328159 LRRC40Q9H9A6 602 aa15.26■□□□□ 0.03
TPM3-205ENST00000328159 TMEM248Q9NWD8 314 aa15.26■□□□□ 0.03
TPM3-205ENST00000328159 SPG21Q9NZD8 308 aa15.26■□□□□ 0.03
TPM3-205ENST00000328159 DRGXA6NNA5 263 aa15.26■□□□□ 0.03
TPM3-205ENST00000328159 CACNG3O60359 315 aa15.26■□□□□ 0.03
TPM3-205ENST00000328159 USP12O75317 370 aa15.26■□□□□ 0.03
TPM3-205ENST00000328159 FAM155BO75949 473 aa15.26■□□□□ 0.03
TPM3-205ENST00000328159 CNTN5O94779 1100 aa15.26■□□□□ 0.03
TPM3-205ENST00000328159 ALDH1A2O94788 518 aa15.26■□□□□ 0.03
TPM3-205ENST00000328159 VIMP08670 466 aaKnown RBP15.26■□□□□ 0.03
TPM3-205ENST00000328159 CSH1P0DML2 217 aa15.26■□□□□ 0.03
TPM3-205ENST00000328159 CSH2P0DML3 217 aa15.26■□□□□ 0.03
TPM3-205ENST00000328159 RAG1P15918 1043 aa15.26■□□□□ 0.03
TPM3-205ENST00000328159 RPA3P35244 121 aaPredicted RBP15.26■□□□□ 0.03
TPM3-205ENST00000328159 IL9RQ01113 521 aa15.26■□□□□ 0.03
TPM3-205ENST00000328159 MTA1Q13330 715 aa15.26■□□□□ 0.03
TPM3-205ENST00000328159 ALFQ53S48 1182 aa15.26■□□□□ 0.03
TPM3-205ENST00000328159 SNX30Q5VWJ9 437 aa15.26■□□□□ 0.03
TPM3-205ENST00000328159 OTOP3Q7RTS5 596 aa15.26■□□□□ 0.03
TPM3-205ENST00000328159 TFAP2DQ7Z6R9 452 aa15.26■□□□□ 0.03
TPM3-205ENST00000328159 KLHDC8BQ8IXV7 354 aa15.26■□□□□ 0.03
TPM3-205ENST00000328159 IGSF8Q969P0 613 aa15.26■□□□□ 0.03
TPM3-205ENST00000328159 ALKBH8Q96BT7 664 aaKnown RBP15.26■□□□□ 0.03
TPM3-205ENST00000328159 OXNAD1Q96HP4 312 aaPredicted RBP15.26■□□□□ 0.03
TPM3-205ENST00000328159 GLOD4Q9HC38 313 aa15.26■□□□□ 0.03
TPM3-205ENST00000328159 DONSONQ9NYP3 566 aa15.26■□□□□ 0.03
TPM3-205ENST00000328159 IPO11Q9UI26 975 aaKnown RBP15.26■□□□□ 0.03
TPM3-205ENST00000328159 DNMT3LQ9UJW3 386 aa15.26■□□□□ 0.03
TPM3-205ENST00000328159 KIAA1671Q9BY89 1806 aa15.25■□□□□ 0.03
TPM3-205ENST00000328159 UGT1A9O60656 530 aa15.25■□□□□ 0.03
TPM3-205ENST00000328159 KRT37O76014 449 aa15.25■□□□□ 0.03
TPM3-205ENST00000328159 ASMTLO95671 621 aa15.25■□□□□ 0.03
TPM3-205ENST00000328159 HMGA1P17096 107 aaKnown RBP15.25■□□□□ 0.03
TPM3-205ENST00000328159 ATP5C1P36542 298 aaKnown RBP15.25■□□□□ 0.03
TPM3-205ENST00000328159 CRYMQ14894 314 aa15.25■□□□□ 0.03
TPM3-205ENST00000328159 LGSNQ5TDP6 509 aa15.25■□□□□ 0.03
TPM3-205ENST00000328159 DDX53Q86TM3 631 aaKnown RBP15.25■□□□□ 0.03
TPM3-205ENST00000328159 SPATS2Q86XZ4 545 aaKnown RBP15.25■□□□□ 0.03
TPM3-205ENST00000328159 TMEM199Q8N511 208 aa15.25■□□□□ 0.03
TPM3-205ENST00000328159 BANPQ8N9N5 519 aa15.25■□□□□ 0.03
TPM3-205ENST00000328159 TTC17Q96AE7 1141 aa15.25■□□□□ 0.03
TPM3-205ENST00000328159 SEC16BQ96JE7 1060 aa15.25■□□□□ 0.03
TPM3-205ENST00000328159 MAGEB18Q96M61 343 aa15.25■□□□□ 0.03
TPM3-205ENST00000328159 ZNF512Q96ME7 567 aaPredicted RBP15.25■□□□□ 0.03
TPM3-205ENST00000328159 FCRL5Q96RD9 977 aa15.25■□□□□ 0.03
TPM3-205ENST00000328159 KLF6Q99612 283 aaPredicted RBP15.25■□□□□ 0.03
TPM3-205ENST00000328159 NSRP1Q9H0G5 558 aaKnown RBP15.25■□□□□ 0.03
TPM3-205ENST00000328159 UGT1A7Q9HAW7 530 aa15.25■□□□□ 0.03
TPM3-205ENST00000328159 UGT1A10Q9HAW8 530 aa15.25■□□□□ 0.03
TPM3-205ENST00000328159 UGT1A8Q9HAW9 530 aa15.25■□□□□ 0.03
TPM3-205ENST00000328159 CYP4F11Q9HBI6 524 aa15.25■□□□□ 0.03
TPM3-205ENST00000328159 BFARQ9NZS9 450 aa15.25■□□□□ 0.03
TPM3-205ENST00000328159 SAMD15Q9P1V8 674 aa15.25■□□□□ 0.03
TPM3-205ENST00000328159 YIPF1Q9Y548 306 aa15.25■□□□□ 0.03
TPM3-205ENST00000328159 PTPRSQ13332 1948 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 CARNS1A5YM72 827 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 ZNF840PA6NDX5 716 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 TCP11X1B4DZS4 312 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 TRIM49D1C9J1S8 452 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 GOLGA8RI6L899 631 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 ZWINTO95229 277 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 URODP06132 367 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 SNRPAP09012 282 aaKnown RBP15.24■□□□□ 0.03
TPM3-205ENST00000328159 ACRP10323 421 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 TACR2P21452 398 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 NPY2RP49146 381 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 KCNQ1P51787 676 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 RAB33AQ14088 237 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 ANO4Q32M45 955 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 SPANXN3Q5MJ09 141 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 GKAP1Q5VSY0 366 aaPredicted RBP15.24■□□□□ 0.03
TPM3-205ENST00000328159 NADSYN1Q6IA69 706 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 NAPEPLDQ6IQ20 393 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 CHSY1Q86X52 802 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 DNAAF3Q8N9W5 541 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 ZNF419Q96HQ0 510 aaPredicted RBP15.24■□□□□ 0.03
TPM3-205ENST00000328159 SERAC1Q96JX3 654 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 RPRD1AQ96P16 312 aaPredicted RBP15.24■□□□□ 0.03
TPM3-205ENST00000328159 PAIP2Q9BPZ3 127 aaKnown RBP15.24■□□□□ 0.03
TPM3-205ENST00000328159 RBM22Q9NW64 420 aaKnown RBP eCLIP15.24■□□□□ 0.03
TPM3-205ENST00000328159 UBP1Q9NZI7 540 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 AAR2Q9Y312 384 aaKnown RBP15.24■□□□□ 0.03
TPM3-205ENST00000328159 KIAA0100Q14667 2235 aaKnown RBP15.24■□□□□ 0.03
TPM3-205ENST00000328159 GOLGA6L7A0A1B0GV03 622 aa15.24■□□□□ 0.03
TPM3-205ENST00000328159 AP3B1O00203 1094 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms