RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 NLRP14Q86W24 1093 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 ETFBKMTQ8IXQ9 262 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 ZNF683Q8IZ20 524 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 ADGRG2Q8IZP9 1017 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 SLC35F6Q8N357 371 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 SCG3Q8WXD2 468 aaKnown RBP5.29□□□□□ -1.56
LRIT3-201ENST00000327908 OR8D1Q8WZ84 308 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 FAM3CQ92520 227 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 KXD1Q9BQD3 176 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 CINPQ9BW66 212 aaPredicted RBP5.29□□□□□ -1.56
LRIT3-201ENST00000327908 C1QTNF7Q9BXJ2 289 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 ACE2Q9BYF1 805 aaPredicted RBP5.29□□□□□ -1.56
LRIT3-201ENST00000327908 LACRTQ9GZZ8 138 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 CDH19Q9H159 772 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 ATP13A1Q9HD20 1204 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 COX16Q9P0S2 106 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 PCSK1NQ9UHG2 260 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 CDC23Q9UJX2 597 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 VPS28Q9UK41 221 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 AAR2Q9Y312 384 aaKnown RBP5.29□□□□□ -1.56
LRIT3-201ENST00000327908 PIAS3Q9Y6X2 628 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.29□□□□□ -1.56
LRIT3-201ENST00000327908 MSI1O43347 362 aaKnown RBP5.29□□□□□ -1.56
LRIT3-201ENST00000327908 ATP9BO43861 1147 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 CEP104O60308 925 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 SYNCRIPO60506 623 aaKnown RBP5.29□□□□□ -1.56
LRIT3-201ENST00000327908 PRAMEF11O60813 436 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 PHF2O75151 1096 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 ITGAVP06756 1048 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 BMP1P13497 986 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 ERCC2P18074 760 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 OGDHQ02218 1023 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 PPIDQ08752 370 aaKnown RBP5.29□□□□□ -1.56
LRIT3-201ENST00000327908 SERINC3Q13530 473 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 CCDC142Q17RM4 750 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 PLEKHG6Q3KR16 790 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 PPP6R3Q5H9R7 873 aaPredicted RBP5.29□□□□□ -1.56
LRIT3-201ENST00000327908 PITRM1Q5JRX3 1037 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 SLC36A4Q6YBV0 504 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 NYAP1Q6ZVC0 841 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 CCDC89Q8N998 374 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 EIF1ADQ8N9N8 165 aaKnown RBP5.29□□□□□ -1.56
LRIT3-201ENST00000327908 ATL2Q8NHH9 583 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 RSAD2Q8WXG1 361 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 EDAQ92838 391 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 SLCO2A1Q92959 643 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 ZNF641Q96N77 438 aaPredicted RBP5.29□□□□□ -1.56
LRIT3-201ENST00000327908 UHRF1Q96T88 793 aaPredicted RBP5.29□□□□□ -1.56
LRIT3-201ENST00000327908 OSGEPQ9NPF4 335 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 DYRK4Q9NR20 520 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 LIMD1Q9UGP4 676 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 VANGL2Q9ULK5 521 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 HS3ST2Q9Y278 367 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 NCKAP1Q9Y2A7 1128 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 KANSL1LA0AUZ9 987 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 NEDD8-MDP1E9PL57 170 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 PIK3R2O00459 728 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 MATN3O15232 486 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 DDX3YO15523 660 aaKnown RBP5.29□□□□□ -1.56
LRIT3-201ENST00000327908 GREM1O60565 184 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 TNNT1P13805 278 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 HOXD9P28356 352 aaPredicted RBP5.29□□□□□ -1.56
LRIT3-201ENST00000327908 GJA4P35212 333 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 PEX5P50542 639 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 KCNQ1P51787 676 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 DGKEP52429 567 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 PTPN5P54829 565 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 ECT2LQ008S8 904 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 ZNF252P-AS1Q0IIN9 211 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 CYP1B1Q16678 543 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 TMEM196Q5HYL7 178 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 IL31Q6EBC2 164 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 ZNF354CQ86Y25 554 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 DNAAF5Q86Y56 855 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 RNF135Q8IUD6 432 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 CCDC185Q8N715 623 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 MAML1Q92585 1016 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 OSBPL9Q96SU4 736 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 APOL5Q9BWW9 433 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 KLC2Q9H0B6 622 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 EIF2B3Q9NR50 452 aaKnown RBP5.29□□□□□ -1.56
LRIT3-201ENST00000327908 THAP10Q9P2Z0 257 aaPredicted RBP5.29□□□□□ -1.56
LRIT3-201ENST00000327908 DKK3Q9UBP4 350 aa5.29□□□□□ -1.56
LRIT3-201ENST00000327908 RGSL1A5PLK6 1076 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 ESPNB1AK53 854 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 H7C0C1 242 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 KRIT1O00522 736 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 ZNF217O75362 1048 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 KAT7O95251 611 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 POP4O95707 220 aaKnown RBP5.28□□□□□ -1.56
LRIT3-201ENST00000327908 CALCAP01258 141 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 CYP2A6P11509 494 aaPredicted RBP5.28□□□□□ -1.56
LRIT3-201ENST00000327908 NTSR1P30989 418 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 GJC1P36383 396 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 ATP5OP48047 213 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 VCPP55072 806 aaKnown RBP5.28□□□□□ -1.56
LRIT3-201ENST00000327908 DLX2Q07687 328 aaPredicted RBP5.28□□□□□ -1.56
LRIT3-201ENST00000327908 CFAP58Q5T655 872 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 MBLAC2Q68D91 279 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 PARM1Q6UWI2 310 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms