RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 RNF181Q9P0P0 153 aa13.16□□□□□ -0.3
HMGCS1-201ENST00000325110 hCG_2014768A0A024R1R8 64 aa13.16□□□□□ -0.3
HMGCS1-201ENST00000325110 SMIM28A0A1B0GU29 152 aa13.16□□□□□ -0.3
HMGCS1-201ENST00000325110 VAPBO95292 243 aa13.16□□□□□ -0.3
HMGCS1-201ENST00000325110 FAM200BP0CF97 657 aa13.16□□□□□ -0.3
HMGCS1-201ENST00000325110 PRPSAP1Q14558 356 aa13.16□□□□□ -0.3
HMGCS1-201ENST00000325110 CYTH1Q15438 398 aa13.16□□□□□ -0.3
HMGCS1-201ENST00000325110 ARL13BQ3SXY8 428 aa13.16□□□□□ -0.3
HMGCS1-201ENST00000325110 MYLK4Q86YV6 388 aaPredicted RBP13.16□□□□□ -0.3
HMGCS1-201ENST00000325110 MAPK15Q8TD08 544 aa13.16□□□□□ -0.3
HMGCS1-201ENST00000325110 PPWD1Q96BP3 646 aaKnown RBP13.16□□□□□ -0.3
HMGCS1-201ENST00000325110 RCN3Q96D15 328 aa13.16□□□□□ -0.3
HMGCS1-201ENST00000325110 ACE2Q9BYF1 805 aaPredicted RBP13.16□□□□□ -0.3
HMGCS1-201ENST00000325110 CLIC5Q9NZA1 410 aa13.16□□□□□ -0.3
HMGCS1-201ENST00000325110 GPC4O75487 556 aa13.15□□□□□ -0.3
HMGCS1-201ENST00000325110 ANKRD20A4Q4UJ75 823 aa13.15□□□□□ -0.3
HMGCS1-201ENST00000325110 GRTP1Q5TC63 336 aa13.15□□□□□ -0.3
HMGCS1-201ENST00000325110 POTEAQ6S8J7 498 aa13.15□□□□□ -0.3
HMGCS1-201ENST00000325110 OTOP3Q7RTS5 596 aa13.15□□□□□ -0.3
HMGCS1-201ENST00000325110 SLC41A1Q8IVJ1 513 aa13.15□□□□□ -0.3
HMGCS1-201ENST00000325110 PNPLA1Q8N8W4 532 aa13.15□□□□□ -0.3
HMGCS1-201ENST00000325110 ACVR1CQ8NER5 493 aa13.15□□□□□ -0.3
HMGCS1-201ENST00000325110 SPATA22Q8NHS9 363 aa13.15□□□□□ -0.3
HMGCS1-201ENST00000325110 ACMSDQ8TDX5 336 aa13.15□□□□□ -0.3
HMGCS1-201ENST00000325110 WNT8BQ93098 351 aa13.15□□□□□ -0.3
HMGCS1-201ENST00000325110 SERPINI1Q99574 410 aa13.15□□□□□ -0.3
HMGCS1-201ENST00000325110 MROH8Q9H579 483 aa13.15□□□□□ -0.3
HMGCS1-201ENST00000325110 FAM96AQ9H5X1 160 aa13.15□□□□□ -0.3
HMGCS1-201ENST00000325110 VRTNQ9H8Y1 702 aa13.15□□□□□ -0.3
HMGCS1-201ENST00000325110 ADAMTS6Q9UKP5 1117 aa13.15□□□□□ -0.3
HMGCS1-201ENST00000325110 STX16-NPEPL1H3BU86 382 aa13.15□□□□□ -0.3
HMGCS1-201ENST00000325110 ZBTB14O43829 449 aa13.15□□□□□ -0.3
HMGCS1-201ENST00000325110 AHCYL1O43865 530 aa13.15□□□□□ -0.3
HMGCS1-201ENST00000325110 CNMDO75829 334 aa13.15□□□□□ -0.3
HMGCS1-201ENST00000325110 AOC1P19801 751 aa13.15□□□□□ -0.3
HMGCS1-201ENST00000325110 ITGAXP20702 1163 aa13.15□□□□□ -0.3
HMGCS1-201ENST00000325110 GRIA4P48058 902 aa13.15□□□□□ -0.3
HMGCS1-201ENST00000325110 NOL9Q5SY16 702 aaKnown RBP13.15□□□□□ -0.3
HMGCS1-201ENST00000325110 MAP3K21Q5TCX8 1036 aa13.15□□□□□ -0.3
HMGCS1-201ENST00000325110 NAPRTQ6XQN6 538 aa13.15□□□□□ -0.3
HMGCS1-201ENST00000325110 PSTKQ8IV42 348 aaKnown RBP13.15□□□□□ -0.3
HMGCS1-201ENST00000325110 GPRC5AQ8NFJ5 357 aa13.15□□□□□ -0.3
HMGCS1-201ENST00000325110 CXorf38Q8TB03 319 aa13.15□□□□□ -0.3
HMGCS1-201ENST00000325110 ARNTL2Q8WYA1 636 aa13.15□□□□□ -0.3
HMGCS1-201ENST00000325110 ELMO2Q96JJ3 720 aa13.15□□□□□ -0.3
HMGCS1-201ENST00000325110 DDX43Q9NXZ2 648 aaKnown RBP13.15□□□□□ -0.3
HMGCS1-201ENST00000325110 FZD10Q9ULW2 581 aa13.15□□□□□ -0.3
HMGCS1-201ENST00000325110 CD4P01730 458 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 MYL3P08590 195 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 ARRB2P32121 409 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 NOS2P35228 1153 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 GRM3Q14832 879 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 DGKDQ16760 1214 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 MAP7D1Q3KQU3 841 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 TMC7Q7Z402 723 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 MAVSQ7Z434 540 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 UNC93AQ86WB7 457 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 PCDH20Q8N6Y1 951 aaKnown RBP13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 SNX27Q96L92 541 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 FSD1LQ9BXM9 530 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 CDH19Q9H159 772 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 WDCPQ9H6R7 721 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 SLC4A7Q9Y6M7 1214 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 SCN1AP35498 2009 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 NUP205Q92621 2012 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 YJEFN3A6XGL0 299 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 HACD1B0YJ81 288 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 SNUPNO95149 360 aaKnown RBP13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 YBX3P16989 372 aaKnown RBP eCLIP13.14□□□□□ -0.315e-10■□□□□ 9
HMGCS1-201ENST00000325110 NPR3P17342 541 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 TSPAN8P19075 237 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 NMBRP28336 390 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 SPANXN3Q5MJ09 141 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 OR52E8Q6IFG1 317 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 STRADAQ7RTN6 431 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 RBBP8Q99708 897 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 RHOBTB2Q9BYZ6 727 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 TMEM233B4DJY2 109 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 NRP1O14786 923 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 MT-CYBP00156 380 aaPredicted RBP13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 SLC4A1P02730 911 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 HNRNPLP14866 589 aaKnown RBP eCLIP13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 PTPN1P18031 435 aaKnown RBP13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 NELFEP18615 380 aaKnown RBP13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 FGFR3P22607 806 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 PTPN3P26045 913 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 ARL1P40616 181 aaPredicted RBP13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 NME5P56597 212 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 CCDC153Q494R4 210 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 SV2CQ496J9 727 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 ARL13AQ5H913 290 aaPredicted RBP13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 BNC2Q6ZN30 1099 aaPredicted RBP13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 FASTKD5Q7L8L6 764 aaKnown RBP13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 RAB3IL1Q8TBN0 382 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 SORT1Q99523 831 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 EPAS1Q99814 870 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 TKTL2Q9H0I9 626 aa13.14□□□□□ -0.31
HMGCS1-201ENST00000325110 A0A0G2JLL6 359 aaPredicted RBP13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 MYOCOSA0A1B0GUC4 107 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 PEX1O43933 1283 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms