RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 TFAP2DQ7Z6R9 452 aa17.1■□□□□ 0.33
CLCF1-201ENST00000312438 CNTD1Q8N815 330 aa17.1■□□□□ 0.33
CLCF1-201ENST00000312438 FATE1Q969F0 183 aa17.1■□□□□ 0.33
CLCF1-201ENST00000312438 CFAP36Q96G28 342 aa17.1■□□□□ 0.33
CLCF1-201ENST00000312438 GORASP1Q9BQQ3 440 aa17.1■□□□□ 0.33
CLCF1-201ENST00000312438 RNF38Q9H0F5 515 aa17.1■□□□□ 0.33
CLCF1-201ENST00000312438 PSMC3IPQ9P2W1 217 aaPredicted RBP17.1■□□□□ 0.33
CLCF1-201ENST00000312438 LZTS1Q9Y250 596 aa17.1■□□□□ 0.33
CLCF1-201ENST00000312438 MAD1L1Q9Y6D9 718 aa17.1■□□□□ 0.33
CLCF1-201ENST00000312438 TLL1O43897 1013 aa17.1■□□□□ 0.33
CLCF1-201ENST00000312438 OAS1P00973 400 aaKnown RBP17.1■□□□□ 0.33
CLCF1-201ENST00000312438 F11P03951 625 aa17.1■□□□□ 0.33
CLCF1-201ENST00000312438 ADH1AP07327 375 aa17.1■□□□□ 0.33
CLCF1-201ENST00000312438 MSH2P43246 934 aa17.1■□□□□ 0.33
CLCF1-201ENST00000312438 MAPKAPK2P49137 400 aa17.1■□□□□ 0.33
CLCF1-201ENST00000312438 TTC19Q6DKK2 380 aaPredicted RBP17.1■□□□□ 0.33
CLCF1-201ENST00000312438 ADGRD1Q6QNK2 874 aa17.1■□□□□ 0.33
CLCF1-201ENST00000312438 CCDC149Q6ZUS6 474 aa17.1■□□□□ 0.33
CLCF1-201ENST00000312438 CYS1Q717R9 158 aa17.1■□□□□ 0.33
CLCF1-201ENST00000312438 C7orf61Q8IZ16 206 aa17.1■□□□□ 0.33
CLCF1-201ENST00000312438 PPP1R2P1Q96PQ5 205 aa17.1■□□□□ 0.33
CLCF1-201ENST00000312438 KLHL5Q96PQ7 755 aa17.1■□□□□ 0.33
CLCF1-201ENST00000312438 NAT9Q9BTE0 207 aa17.1■□□□□ 0.33
CLCF1-201ENST00000312438 DHRS4Q9BTZ2 278 aa17.1■□□□□ 0.33
CLCF1-201ENST00000312438 KLF16Q9BXK1 252 aaPredicted RBP17.1■□□□□ 0.33
CLCF1-201ENST00000312438 AAR2Q9Y312 384 aaKnown RBP17.1■□□□□ 0.33
CLCF1-201ENST00000312438 MYO16Q9Y6X6 1858 aa17.09■□□□□ 0.33
CLCF1-201ENST00000312438 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.09■□□□□ 0.33
CLCF1-201ENST00000312438 RASA4BC9J798 803 aa17.09■□□□□ 0.33
CLCF1-201ENST00000312438 AP3B1O00203 1094 aa17.09■□□□□ 0.33
CLCF1-201ENST00000312438 RASA4O43374 803 aa17.09■□□□□ 0.33
CLCF1-201ENST00000312438 SPATA31D3P0C874 917 aa17.09■□□□□ 0.33
CLCF1-201ENST00000312438 YBEYP58557 167 aaPredicted RBP17.09■□□□□ 0.33
CLCF1-201ENST00000312438 HNRNPDQ14103 355 aaKnown RBP17.09■□□□□ 0.33
CLCF1-201ENST00000312438 TMED2Q15363 201 aa17.09■□□□□ 0.33
CLCF1-201ENST00000312438 UNC5AQ6ZN44 842 aa17.09■□□□□ 0.33
CLCF1-201ENST00000312438 SPATA31D4Q6ZUB0 917 aa17.09■□□□□ 0.33
CLCF1-201ENST00000312438 TMEM150AQ86TG1 271 aa17.09■□□□□ 0.33
CLCF1-201ENST00000312438 LGI2Q8N0V4 545 aa17.09■□□□□ 0.33
CLCF1-201ENST00000312438 USP33Q8TEY7 942 aa17.09■□□□□ 0.33
CLCF1-201ENST00000312438 STAMBPL1Q96FJ0 436 aa17.09■□□□□ 0.33
CLCF1-201ENST00000312438 FCRL5Q96RD9 977 aa17.09■□□□□ 0.33
CLCF1-201ENST00000312438 PAFAH2Q99487 392 aa17.09■□□□□ 0.33
CLCF1-201ENST00000312438 SELENOSQ9BQE4 189 aa17.09■□□□□ 0.33
CLCF1-201ENST00000312438 EMILIN2Q9BXX0 1053 aa17.09■□□□□ 0.33
CLCF1-201ENST00000312438 GKN1Q9NS71 199 aa17.09■□□□□ 0.33
CLCF1-201ENST00000312438 RBM22Q9NW64 420 aaKnown RBP eCLIP17.09■□□□□ 0.33
CLCF1-201ENST00000312438 ZNF212Q9UDV6 495 aa17.09■□□□□ 0.33
CLCF1-201ENST00000312438 IRAK3Q9Y616 596 aa17.09■□□□□ 0.33
CLCF1-201ENST00000312438 C2orf78A6NCI8 922 aa17.08■□□□□ 0.33
CLCF1-201ENST00000312438 RAMP2O60895 175 aa17.08■□□□□ 0.33
CLCF1-201ENST00000312438 STC2O76061 302 aa17.08■□□□□ 0.33
CLCF1-201ENST00000312438 PRKCHP24723 683 aa17.08■□□□□ 0.33
CLCF1-201ENST00000312438 OR1E1P30953 314 aa17.08■□□□□ 0.33
CLCF1-201ENST00000312438 RENBPP51606 427 aa17.08■□□□□ 0.33
CLCF1-201ENST00000312438 SESN2P58004 480 aaPredicted RBP17.08■□□□□ 0.33
CLCF1-201ENST00000312438 SPARCL1Q14515 664 aa17.08■□□□□ 0.33
CLCF1-201ENST00000312438 POLD3Q15054 466 aaPredicted RBP17.08■□□□□ 0.33
CLCF1-201ENST00000312438 KBTBD12Q3ZCT8 623 aa17.08■□□□□ 0.33
CLCF1-201ENST00000312438 PARP15Q460N3 678 aa17.08■□□□□ 0.33
CLCF1-201ENST00000312438 DENND1CQ8IV53 801 aa17.08■□□□□ 0.33
CLCF1-201ENST00000312438 KLHDC8BQ8IXV7 354 aa17.08■□□□□ 0.33
CLCF1-201ENST00000312438 MPP5Q8N3R9 675 aa17.08■□□□□ 0.33
CLCF1-201ENST00000312438 GSDMBQ8TAX9 411 aa17.08■□□□□ 0.33
CLCF1-201ENST00000312438 CENPTQ96BT3 561 aa17.08■□□□□ 0.33
CLCF1-201ENST00000312438 MRRFQ96E11 262 aaKnown RBP17.08■□□□□ 0.33
CLCF1-201ENST00000312438 MLPHQ9BV36 600 aaPredicted RBP17.08■□□□□ 0.33
CLCF1-201ENST00000312438 MTIF3Q9H2K0 278 aaKnown RBP17.08■□□□□ 0.33
CLCF1-201ENST00000312438 LRRC40Q9H9A6 602 aa17.08■□□□□ 0.33
CLCF1-201ENST00000312438 GLOD4Q9HC38 313 aa17.08■□□□□ 0.33
CLCF1-201ENST00000312438 SENP1Q9P0U3 644 aa17.08■□□□□ 0.33
CLCF1-201ENST00000312438 PCDHA11Q9Y5I1 949 aa17.08■□□□□ 0.33
CLCF1-201ENST00000312438 ANXA9O76027 345 aa17.07■□□□□ 0.32
CLCF1-201ENST00000312438 NEBLO76041 1014 aa17.07■□□□□ 0.32
CLCF1-201ENST00000312438 LRG1P02750 347 aa17.07■□□□□ 0.32
CLCF1-201ENST00000312438 KRT15P19012 456 aa17.07■□□□□ 0.32
CLCF1-201ENST00000312438 MGAT1P26572 445 aa17.07■□□□□ 0.32
CLCF1-201ENST00000312438 LSP1P33241 339 aa17.07■□□□□ 0.32
CLCF1-201ENST00000312438 IFNAR2P48551 515 aa17.07■□□□□ 0.32
CLCF1-201ENST00000312438 FAM133BQ5BKY9 247 aaKnown RBP17.07■□□□□ 0.32
CLCF1-201ENST00000312438 CASC4Q6P4E1 433 aa17.07■□□□□ 0.32
CLCF1-201ENST00000312438 LEKR1Q6ZMV7 388 aa17.07■□□□□ 0.32
CLCF1-201ENST00000312438 OTOP3Q7RTS5 596 aa17.07■□□□□ 0.32
CLCF1-201ENST00000312438 LINC00523Q86TU6 105 aa17.07■□□□□ 0.32
CLCF1-201ENST00000312438 TRABD2AQ86V40 505 aa17.07■□□□□ 0.32
CLCF1-201ENST00000312438 SRRM1Q8IYB3 904 aaKnown RBP17.07■□□□□ 0.32
CLCF1-201ENST00000312438 MDM1Q8TC05 714 aa17.07■□□□□ 0.32
CLCF1-201ENST00000312438 HMCESQ96FZ2 354 aa17.07■□□□□ 0.32
CLCF1-201ENST00000312438 TCF25Q9BQ70 676 aa17.07■□□□□ 0.32
CLCF1-201ENST00000312438 PLAC1Q9HBJ0 212 aa17.07■□□□□ 0.32
CLCF1-201ENST00000312438 CASS4Q9NQ75 786 aa17.07■□□□□ 0.32
CLCF1-201ENST00000312438 BFARQ9NZS9 450 aa17.07■□□□□ 0.32
CLCF1-201ENST00000312438 RWDD3Q9Y3V2 267 aa17.07■□□□□ 0.32
CLCF1-201ENST00000312438 IKBKGQ9Y6K9 419 aa17.07■□□□□ 0.32
CLCF1-201ENST00000312438 KLKB1P03952 638 aa17.07■□□□□ 0.32
CLCF1-201ENST00000312438 BRAFP15056 766 aa17.07■□□□□ 0.32
CLCF1-201ENST00000312438 CHN1P15882 459 aa17.07■□□□□ 0.32
CLCF1-201ENST00000312438 CORO1AP31146 461 aaKnown RBP17.07■□□□□ 0.32
CLCF1-201ENST00000312438 SLC6A4P31645 630 aa17.07■□□□□ 0.32
CLCF1-201ENST00000312438 EFTUD2Q15029 972 aaKnown RBP eCLIP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms