RNA–Protein interactions for RNA: ENST00000310614.11

MRPL48-201, Transcript of mitochondrial ribosomal protein L48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL48, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-201ENST00000310614 LRRC19Q9H756 370 aa13.16□□□□□ -0.3
MRPL48-201ENST00000310614 UBE2ZQ9H832 354 aaPredicted RBP13.16□□□□□ -0.3
MRPL48-201ENST00000310614 TMEM248Q9NWD8 314 aa13.16□□□□□ -0.3
MRPL48-201ENST00000310614 THG1LQ9NWX6 298 aaKnown RBP13.16□□□□□ -0.3
MRPL48-201ENST00000310614 MPP6Q9NZW5 540 aa13.16□□□□□ -0.3
MRPL48-201ENST00000310614 BCCIPQ9P287 314 aaKnown RBP eCLIP13.16□□□□□ -0.3
MRPL48-201ENST00000310614 PCYOX1Q9UHG3 505 aa13.16□□□□□ -0.3
MRPL48-201ENST00000310614 LAMA2P24043 3122 aaKnown RBP13.16□□□□□ -0.3
MRPL48-201ENST00000310614 ANAPC1Q9H1A4 1944 aa13.15□□□□□ -0.3
MRPL48-201ENST00000310614 H7C0C1 242 aa13.15□□□□□ -0.3
MRPL48-201ENST00000310614 GREM1O60565 184 aa13.15□□□□□ -0.3
MRPL48-201ENST00000310614 CLDN11O75508 207 aa13.15□□□□□ -0.3
MRPL48-201ENST00000310614 SLC6A4P31645 630 aa13.15□□□□□ -0.3
MRPL48-201ENST00000310614 ATP5OP48047 213 aa13.15□□□□□ -0.3
MRPL48-201ENST00000310614 IFNAR2P48551 515 aa13.15□□□□□ -0.3
MRPL48-201ENST00000310614 MAPKAPK2P49137 400 aa13.15□□□□□ -0.3
MRPL48-201ENST00000310614 LIG3P49916 1009 aa13.15□□□□□ -0.3
MRPL48-201ENST00000310614 PMS2P54278 862 aa13.15□□□□□ -0.3
MRPL48-201ENST00000310614 EIF3EP60228 445 aaKnown RBP13.15□□□□□ -0.3
MRPL48-201ENST00000310614 BYSLQ13895 437 aaKnown RBP13.15□□□□□ -0.3
MRPL48-201ENST00000310614 SLMAPQ14BN4 828 aa13.15□□□□□ -0.3
MRPL48-201ENST00000310614 SIX1Q15475 284 aaPredicted RBP13.15□□□□□ -0.3
MRPL48-201ENST00000310614 CYP1B1Q16678 543 aa13.15□□□□□ -0.3
MRPL48-201ENST00000310614 C5orf22Q49AR2 442 aa13.15□□□□□ -0.3
MRPL48-201ENST00000310614 MPPE1Q53F39 396 aa13.15□□□□□ -0.3
MRPL48-201ENST00000310614 C6orf118Q5T5N4 469 aa13.15□□□□□ -0.3
MRPL48-201ENST00000310614 DENND2CQ68D51 928 aa13.15□□□□□ -0.3
MRPL48-201ENST00000310614 CHST9Q7L1S5 443 aa13.15□□□□□ -0.3
MRPL48-201ENST00000310614 OTOP3Q7RTS5 596 aa13.15□□□□□ -0.3
MRPL48-201ENST00000310614 CDKL3Q8IVW4 592 aaPredicted RBP13.15□□□□□ -0.3
MRPL48-201ENST00000310614 BBS7Q8IWZ6 715 aa13.15□□□□□ -0.3
MRPL48-201ENST00000310614 FAM217AQ8IXS0 508 aa13.15□□□□□ -0.3
MRPL48-201ENST00000310614 ZNF683Q8IZ20 524 aa13.15□□□□□ -0.3
MRPL48-201ENST00000310614 TDRD5Q8NAT2 981 aaKnown RBP13.15□□□□□ -0.3
MRPL48-201ENST00000310614 BPIFB1Q8TDL5 484 aa13.15□□□□□ -0.3
MRPL48-201ENST00000310614 IGSF8Q969P0 613 aa13.15□□□□□ -0.3
MRPL48-201ENST00000310614 WBP2Q969T9 261 aa13.15□□□□□ -0.3
MRPL48-201ENST00000310614 TMA16Q96EY4 203 aaKnown RBP13.15□□□□□ -0.3
MRPL48-201ENST00000310614 PGM2Q96G03 612 aa13.15□□□□□ -0.3
MRPL48-201ENST00000310614 TMEM109Q9BVC6 243 aa13.15□□□□□ -0.3
MRPL48-201ENST00000310614 BRD8Q9H0E9 1235 aa13.15□□□□□ -0.3
MRPL48-201ENST00000310614 DPH5Q9H2P9 285 aa13.15□□□□□ -0.3
MRPL48-201ENST00000310614 PABPC3Q9H361 631 aaKnown RBP13.15□□□□□ -0.3
MRPL48-201ENST00000310614 TRPV4Q9HBA0 871 aa13.15□□□□□ -0.3
MRPL48-201ENST00000310614 ZFP14Q9HCL3 533 aa13.15□□□□□ -0.3
MRPL48-201ENST00000310614 CDH22Q9UJ99 828 aa13.15□□□□□ -0.3
MRPL48-201ENST00000310614 NEU3Q9UQ49 428 aa13.15□□□□□ -0.3
MRPL48-201ENST00000310614 R3HDM2Q9Y2K5 976 aaKnown RBP13.15□□□□□ -0.3
MRPL48-201ENST00000310614 TRIOBPQ9H2D6 2365 aa13.15□□□□□ -0.3
MRPL48-201ENST00000310614 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.14□□□□□ -0.31
MRPL48-201ENST00000310614 A0A1B0GVM2 712 aa13.14□□□□□ -0.31
MRPL48-201ENST00000310614 TCAF2A6NFQ2 919 aa13.14□□□□□ -0.31
MRPL48-201ENST00000310614 C5orf60A6NFR6 353 aa13.14□□□□□ -0.31
MRPL48-201ENST00000310614 HACD1B0YJ81 288 aa13.14□□□□□ -0.31
MRPL48-201ENST00000310614 H3BQ06 376 aaPredicted RBP13.14□□□□□ -0.31
MRPL48-201ENST00000310614 SCAMP3O14828 347 aaKnown RBP13.14□□□□□ -0.31
MRPL48-201ENST00000310614 LIASO43766 372 aa13.14□□□□□ -0.31
MRPL48-201ENST00000310614 MFSD11O43934 449 aa13.14□□□□□ -0.31
MRPL48-201ENST00000310614 TSPAN3O60637 253 aa13.14□□□□□ -0.31
MRPL48-201ENST00000310614 GAS8O95995 478 aa13.14□□□□□ -0.31
MRPL48-201ENST00000310614 PECAM1P16284 738 aaPredicted RBP13.14□□□□□ -0.31
MRPL48-201ENST00000310614 KCNA5P22460 613 aa13.14□□□□□ -0.31
MRPL48-201ENST00000310614 VCPP55072 806 aaKnown RBP13.14□□□□□ -0.31
MRPL48-201ENST00000310614 GBE1Q04446 702 aa13.14□□□□□ -0.31
MRPL48-201ENST00000310614 ZNF177Q13360 481 aaPredicted RBP13.14□□□□□ -0.31
MRPL48-201ENST00000310614 XRCC4Q13426 336 aa13.14□□□□□ -0.31
MRPL48-201ENST00000310614 SMAD4Q13485 552 aaKnown RBP13.14□□□□□ -0.31
MRPL48-201ENST00000310614 SNX1Q13596 522 aa13.14□□□□□ -0.31
MRPL48-201ENST00000310614 PDK1Q15118 436 aa13.14□□□□□ -0.31
MRPL48-201ENST00000310614 NOMO1Q15155 1222 aa13.14□□□□□ -0.31
MRPL48-201ENST00000310614 ICE2Q659A1 982 aa13.14□□□□□ -0.31
MRPL48-201ENST00000310614 DRICH1Q6PGQ1 229 aaPredicted RBP13.14□□□□□ -0.31
MRPL48-201ENST00000310614 DARS2Q6PI48 645 aaKnown RBP13.14□□□□□ -0.31
MRPL48-201ENST00000310614 CCDC137Q6PK04 289 aaKnown RBP13.14□□□□□ -0.31
MRPL48-201ENST00000310614 NPNTQ6UXI9 565 aa13.14□□□□□ -0.31
MRPL48-201ENST00000310614 MTSS1LQ765P7 747 aa13.14□□□□□ -0.31
MRPL48-201ENST00000310614 GSTA5Q7RTV2 222 aa13.14□□□□□ -0.31
MRPL48-201ENST00000310614 TFAP2DQ7Z6R9 452 aa13.14□□□□□ -0.31
MRPL48-201ENST00000310614 JAMLQ86YT9 394 aa13.14□□□□□ -0.31
MRPL48-201ENST00000310614 YAF2Q8IY57 180 aa13.14□□□□□ -0.31
MRPL48-201ENST00000310614 CNPY4Q8N129 248 aa13.14□□□□□ -0.31
MRPL48-201ENST00000310614 ZNF557Q8N988 423 aaPredicted RBP13.14□□□□□ -0.31
MRPL48-201ENST00000310614 DDI1Q8WTU0 396 aa13.14□□□□□ -0.31
MRPL48-201ENST00000310614 ATG4AQ8WYN0 398 aa13.14□□□□□ -0.31
MRPL48-201ENST00000310614 TLCD1Q96CP7 247 aa13.14□□□□□ -0.31
MRPL48-201ENST00000310614 POMKQ9H5K3 350 aa13.14□□□□□ -0.31
MRPL48-201ENST00000310614 ZDHHC18Q9NUE0 388 aa13.14□□□□□ -0.31
MRPL48-201ENST00000310614 ETNK2Q9NVF9 386 aa13.14□□□□□ -0.31
MRPL48-201ENST00000310614 NOVA2Q9UNW9 492 aaKnown RBP13.14□□□□□ -0.31
MRPL48-201ENST00000310614 ZNF148Q9UQR1 794 aa13.14□□□□□ -0.31
MRPL48-201ENST00000310614 USP15Q9Y4E8 981 aaPredicted RBP13.14□□□□□ -0.31
MRPL48-201ENST00000310614 CFAP69A5D8W1 941 aa13.13□□□□□ -0.31
MRPL48-201ENST00000310614 ANKRD65E5RJM6 399 aa13.13□□□□□ -0.31
MRPL48-201ENST00000310614 H0YHG0 523 aa13.13□□□□□ -0.31
MRPL48-201ENST00000310614 TRDMT1O14717 391 aaKnown RBP13.13□□□□□ -0.31
MRPL48-201ENST00000310614 TBL1XO60907 577 aa13.13□□□□□ -0.31
MRPL48-201ENST00000310614 ECEL1O95672 775 aa13.13□□□□□ -0.31
MRPL48-201ENST00000310614 RHOCP08134 193 aa13.13□□□□□ -0.31
MRPL48-201ENST00000310614 RBP3P10745 1247 aa13.13□□□□□ -0.31
MRPL48-201ENST00000310614 LAMP2P13473 410 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms