RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 FBXO44Q9H4M3 255 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 SERHLQ9NQF3 203 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 MTF2Q9Y483 593 aaPredicted RBP13.38□□□□□ -0.27
SNED1-201ENST00000310397 AKAP12Q02952 1782 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 PGM3O95394 542 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 ERVK-10P10266 1014 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 FGFR3P22607 806 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 CASP12Q6UXS9 341 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 WDR12Q9GZL7 423 aaKnown RBP13.38□□□□□ -0.27
SNED1-201ENST00000310397 MIEF1Q9NQG6 463 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 UBAP1Q9NZ09 502 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 DUSP12Q9UNI6 340 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 TNPO3Q9Y5L0 923 aaKnown RBP13.38□□□□□ -0.27
SNED1-201ENST00000310397 PRR23AA6NEV1 266 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 RGS14O43566 566 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 TGDSO95455 350 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 NAGLUP54802 743 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 NFE2Q16621 373 aaPredicted RBP13.38□□□□□ -0.27
SNED1-201ENST00000310397 FAM83AQ86UY5 434 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 FAM45AQ8TCE6 357 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 MRPL57Q9BQC6 102 aaKnown RBP13.38□□□□□ -0.27
SNED1-201ENST00000310397 SEMA6AQ9H2E6 1030 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 MAPRE3Q9UPY8 281 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 FSCN2O14926 492 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 CCNA2P20248 432 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 CDH3P22223 829 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 ZNF143P52747 638 aaPredicted RBP13.38□□□□□ -0.27
SNED1-201ENST00000310397 BFSP2Q13515 415 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 DPYSQ14117 519 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 PHF13Q86YI8 300 aaPredicted RBP13.38□□□□□ -0.27
SNED1-201ENST00000310397 ZNF276Q8N554 614 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 MAGEE2Q8TD90 523 aaPredicted RBP13.38□□□□□ -0.27
SNED1-201ENST00000310397 PARK7Q99497 189 aaKnown RBP13.38□□□□□ -0.27
SNED1-201ENST00000310397 INVSQ9Y283 1065 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 RAP2CQ9Y3L5 183 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 IL6P05231 212 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 CHRNA5P30532 468 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 DPP10Q8N608 796 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 TBL1YQ9BQ87 522 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 REEP1Q9H902 201 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 PNMA8BQ9ULN7 279 aaPredicted RBP13.38□□□□□ -0.27
SNED1-201ENST00000310397 IFT172Q9UG01 1749 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 UMODL1Q5DID0 1318 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 EPHB6O15197 1021 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 ZSCAN5DPP0CG00 497 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 GPC1P35052 558 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 CSE1LP55060 971 aaKnown RBP13.38□□□□□ -0.27
SNED1-201ENST00000310397 GTF2BQ00403 316 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 FAM187BQ17R55 369 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 B3GALNT2Q8NCR0 500 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 GJD4Q96KN9 370 aaPredicted RBP13.38□□□□□ -0.27
SNED1-201ENST00000310397 MROH8Q9H579 483 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 ADPRHL2Q9NX46 363 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 KLK14Q9P0G3 267 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 ABT1Q9ULW3 272 aaKnown RBP13.38□□□□□ -0.27
SNED1-201ENST00000310397 EFR3BQ9Y2G0 817 aa13.38□□□□□ -0.27
SNED1-201ENST00000310397 KCNH1O95259 989 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 CDC16Q13042 620 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 VGLL2Q8N8G2 317 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 HAS1Q92839 578 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 NOL6Q9H6R4 1146 aaKnown RBP13.37□□□□□ -0.27
SNED1-201ENST00000310397 PIPSLA2A3N6 862 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 ACKR2O00590 384 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 TRIM38O00635 465 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 GPR182O15218 404 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 LBPP18428 481 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 IL17AQ16552 155 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 PQLC1Q8N2U9 271 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 KAT2BQ92831 832 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 SEMA4DQ92854 862 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 ACOX2Q99424 681 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 RTKNQ9BST9 563 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 DGCR6LQ9BY27 220 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 ELP3Q9H9T3 547 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 MT-CO1P00395 513 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 SHMT1P34896 483 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 GABRB2P47870 512 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 COX10Q12887 443 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 CAMK2GQ13555 558 aaPredicted RBP13.37□□□□□ -0.27
SNED1-201ENST00000310397 NR1D2Q14995 579 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 ANGEL2Q5VTE6 544 aaKnown RBP13.37□□□□□ -0.27
SNED1-201ENST00000310397 TYW3Q6IPR3 259 aaKnown RBP13.37□□□□□ -0.27
SNED1-201ENST00000310397 BBS12Q6ZW61 710 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 FBXO6Q9NRD1 293 aaPredicted RBP13.37□□□□□ -0.27
SNED1-201ENST00000310397 TMEM216Q9P0N5 145 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 POLLQ9UGP5 575 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 PXDNQ92626 1479 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 PPATQ06203 517 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 LNX1Q8TBB1 728 aaPredicted RBP13.37□□□□□ -0.27
SNED1-201ENST00000310397 OMA1Q96E52 524 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 ZNF670Q9BS34 389 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 CDH9Q9ULB4 789 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 KCNK1O00180 336 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 ADCY6O43306 1168 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 AMPD1P23109 780 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 KLHL17Q6TDP4 642 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 CCDC80Q76M96 950 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 ZNF605Q86T29 641 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 STK40Q8N2I9 435 aa13.37□□□□□ -0.27
SNED1-201ENST00000310397 RERGLQ9H628 205 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms