RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 EXOC4Q96A65 974 aa23.06■■□□□ 1.28
IRF3-201ENST00000309877 RBM15Q96T37 977 aaKnown RBP eCLIP23.06■■□□□ 1.28
IRF3-201ENST00000309877 SMG9Q9H0W8 520 aaKnown RBP23.06■■□□□ 1.28
IRF3-201ENST00000309877 SFXN1Q9H9B4 322 aa23.06■■□□□ 1.28
IRF3-201ENST00000309877 ZMYM5Q9UJ78 669 aa23.06■■□□□ 1.28
IRF3-201ENST00000309877 MRPS23Q9Y3D9 190 aaKnown RBP23.06■■□□□ 1.28
IRF3-201ENST00000309877 CHD9Q3L8U1 2897 aa23.06■■□□□ 1.28
IRF3-201ENST00000309877 MYO7AQ13402 2215 aa23.06■■□□□ 1.28
IRF3-201ENST00000309877 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.06■■□□□ 1.28
IRF3-201ENST00000309877 TYW5A2RUC4 315 aaKnown RBP23.06■■□□□ 1.28
IRF3-201ENST00000309877 APRTP07741 180 aa23.06■■□□□ 1.28
IRF3-201ENST00000309877 CCNB1P14635 433 aa23.06■■□□□ 1.28
IRF3-201ENST00000309877 ARL4CP56559 192 aa23.06■■□□□ 1.28
IRF3-201ENST00000309877 ZNF177Q13360 481 aaPredicted RBP23.06■■□□□ 1.28
IRF3-201ENST00000309877 SPDYCQ5MJ68 293 aa23.06■■□□□ 1.28
IRF3-201ENST00000309877 SYCP2LQ5T4T6 812 aa23.06■■□□□ 1.28
IRF3-201ENST00000309877 TMC5Q6UXY8 1006 aa23.06■■□□□ 1.28
IRF3-201ENST00000309877 CHST9Q7L1S5 443 aa23.06■■□□□ 1.28
IRF3-201ENST00000309877 SH3RF2Q8TEC5 729 aa23.06■■□□□ 1.28
IRF3-201ENST00000309877 DZANK1Q9NVP4 752 aa23.06■■□□□ 1.28
IRF3-201ENST00000309877 CHD7Q9P2D1 2997 aa23.05■■□□□ 1.28
IRF3-201ENST00000309877 A0A1B0GVM2 712 aa23.05■■□□□ 1.28
IRF3-201ENST00000309877 TCAF2A6NFQ2 919 aa23.05■■□□□ 1.28
IRF3-201ENST00000309877 TMEM63AO94886 807 aa23.05■■□□□ 1.28
IRF3-201ENST00000309877 LMAN1P49257 510 aa23.05■■□□□ 1.28
IRF3-201ENST00000309877 SGSHP51688 502 aa23.05■■□□□ 1.28
IRF3-201ENST00000309877 ZBTB17Q13105 803 aa23.05■■□□□ 1.28
IRF3-201ENST00000309877 SEMA5AQ13591 1074 aa23.05■■□□□ 1.28
IRF3-201ENST00000309877 HIF1AQ16665 826 aa23.05■■□□□ 1.28
IRF3-201ENST00000309877 ANO4Q32M45 955 aa23.05■■□□□ 1.28
IRF3-201ENST00000309877 C6orf118Q5T5N4 469 aa23.05■■□□□ 1.28
IRF3-201ENST00000309877 ITPRIPL1Q6GPH6 555 aa23.05■■□□□ 1.28
IRF3-201ENST00000309877 PPP1R21Q6ZMI0 780 aa23.05■■□□□ 1.28
IRF3-201ENST00000309877 CENPUQ71F23 418 aa23.05■■□□□ 1.28
IRF3-201ENST00000309877 VN1R2Q8NFZ6 395 aa23.05■■□□□ 1.28
IRF3-201ENST00000309877 TMA16Q96EY4 203 aaKnown RBP23.05■■□□□ 1.28
IRF3-201ENST00000309877 AGAP3Q96P47 875 aa23.05■■□□□ 1.28
IRF3-201ENST00000309877 GOLGA6BA6NDN3 693 aa23.04■■□□□ 1.28
IRF3-201ENST00000309877 F5H423 210 aaPredicted RBP23.04■■□□□ 1.28
IRF3-201ENST00000309877 NEBLO76041 1014 aa23.04■■□□□ 1.28
IRF3-201ENST00000309877 MAGEA6P43360 314 aa23.04■■□□□ 1.28
IRF3-201ENST00000309877 IFI35P80217 286 aaPredicted RBP23.04■■□□□ 1.28
IRF3-201ENST00000309877 UAP1Q16222 522 aaPredicted RBP23.04■■□□□ 1.28
IRF3-201ENST00000309877 TRMT10CQ7L0Y3 403 aaKnown RBP23.04■■□□□ 1.28
IRF3-201ENST00000309877 HJURPQ8NCD3 748 aaPredicted RBP23.04■■□□□ 1.28
IRF3-201ENST00000309877 USP33Q8TEY7 942 aa23.04■■□□□ 1.28
IRF3-201ENST00000309877 RUFY1Q96T51 708 aa23.04■■□□□ 1.28
IRF3-201ENST00000309877 PABPC3Q9H361 631 aaKnown RBP23.04■■□□□ 1.28
IRF3-201ENST00000309877 SEMA4AQ9H3S1 761 aa23.04■■□□□ 1.28
IRF3-201ENST00000309877 SP110Q9HB58 689 aa23.04■■□□□ 1.28
IRF3-201ENST00000309877 TDP1Q9NUW8 608 aa23.04■■□□□ 1.28
IRF3-201ENST00000309877 IGSF9Q9P2J2 1179 aa23.04■■□□□ 1.28
IRF3-201ENST00000309877 RSPH14Q9UHP6 348 aa23.04■■□□□ 1.28
IRF3-201ENST00000309877 ZBTB24O43167 697 aaPredicted RBP23.03■■□□□ 1.28
IRF3-201ENST00000309877 TBL1XO60907 577 aa23.03■■□□□ 1.28
IRF3-201ENST00000309877 PSMB4P28070 264 aa23.03■■□□□ 1.28
IRF3-201ENST00000309877 FAM193AP78312 1265 aa23.03■■□□□ 1.28
IRF3-201ENST00000309877 KCNC3Q14003 757 aa23.03■■□□□ 1.28
IRF3-201ENST00000309877 BBS7Q8IWZ6 715 aa23.03■■□□□ 1.28
IRF3-201ENST00000309877 FAM217AQ8IXS0 508 aa23.03■■□□□ 1.28
IRF3-201ENST00000309877 NSMCE1Q8WV22 266 aa23.03■■□□□ 1.28
IRF3-201ENST00000309877 ING5Q8WYH8 240 aa23.03■■□□□ 1.28
IRF3-201ENST00000309877 TEKT5Q96M29 485 aa23.03■■□□□ 1.28
IRF3-201ENST00000309877 FRMD8Q9BZ67 464 aaPredicted RBP23.03■■□□□ 1.28
IRF3-201ENST00000309877 MAGEH1Q9H213 219 aa23.03■■□□□ 1.28
IRF3-201ENST00000309877 NSUN3Q9H649 340 aaKnown RBP23.03■■□□□ 1.28
IRF3-201ENST00000309877 SAYSD1Q9NPB0 183 aa23.03■■□□□ 1.28
IRF3-201ENST00000309877 E2F8A0AVK6 867 aa23.03■■□□□ 1.28
IRF3-201ENST00000309877 RHOCP08134 193 aa23.03■■□□□ 1.28
IRF3-201ENST00000309877 CEBPBP17676 345 aa23.03■■□□□ 1.28
IRF3-201ENST00000309877 TPSB2P20231 275 aa23.03■■□□□ 1.28
IRF3-201ENST00000309877 GAD2Q05329 585 aa23.03■■□□□ 1.28
IRF3-201ENST00000309877 GPS2Q13227 327 aa23.03■■□□□ 1.28
IRF3-201ENST00000309877 SERINC3Q13530 473 aa23.03■■□□□ 1.28
IRF3-201ENST00000309877 TPSAB1Q15661 275 aa23.03■■□□□ 1.28
IRF3-201ENST00000309877 PDIK1LQ8N165 341 aa23.03■■□□□ 1.28
IRF3-201ENST00000309877 CPXM2Q8N436 756 aa23.03■■□□□ 1.28
IRF3-201ENST00000309877 USP13Q92995 863 aaPredicted RBP23.03■■□□□ 1.28
IRF3-201ENST00000309877 CDC42EP4Q9H3Q1 356 aaKnown RBP23.03■■□□□ 1.28
IRF3-201ENST00000309877 CCL26Q9Y258 94 aa23.03■■□□□ 1.28
IRF3-201ENST00000309877 PLAAQ9Y263 795 aa23.03■■□□□ 1.28
IRF3-201ENST00000309877 DENND4CQ5VZ89 1909 aa23.03■■□□□ 1.28
IRF3-201ENST00000309877 ACVRL1P37023 503 aa23.02■■□□□ 1.28
IRF3-201ENST00000309877 MAGEA4P43358 317 aa23.02■■□□□ 1.28
IRF3-201ENST00000309877 SARNPP82979 210 aaKnown RBP23.02■■□□□ 1.28
IRF3-201ENST00000309877 GNA12Q03113 381 aa23.02■■□□□ 1.28
IRF3-201ENST00000309877 PDIA2Q13087 525 aaKnown RBP23.02■■□□□ 1.28
IRF3-201ENST00000309877 RARS2Q5T160 578 aaKnown RBP23.02■■□□□ 1.28
IRF3-201ENST00000309877 DENND2CQ68D51 928 aa23.02■■□□□ 1.28
IRF3-201ENST00000309877 CHRDL2Q6WN34 429 aa23.02■■□□□ 1.28
IRF3-201ENST00000309877 SETD3Q86TU7 594 aaPredicted RBP23.02■■□□□ 1.28
IRF3-201ENST00000309877 RELL1Q8IUW5 271 aa23.02■■□□□ 1.28
IRF3-201ENST00000309877 IQCKQ8N0W5 287 aa23.02■■□□□ 1.28
IRF3-201ENST00000309877 TDRD5Q8NAT2 981 aaKnown RBP23.02■■□□□ 1.28
IRF3-201ENST00000309877 MCUQ8NE86 351 aa23.02■■□□□ 1.28
IRF3-201ENST00000309877 ZSCAN18Q8TBC5 510 aaPredicted RBP23.02■■□□□ 1.28
IRF3-201ENST00000309877 ARHGEF2Q92974 986 aaKnown RBP23.02■■□□□ 1.28
IRF3-201ENST00000309877 FATE1Q969F0 183 aa23.02■■□□□ 1.28
IRF3-201ENST00000309877 ZBTB9Q96C00 473 aa23.02■■□□□ 1.28
IRF3-201ENST00000309877 ZIM3Q96PE6 472 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms