RNA–Protein interactions for RNA: ENST00000309859.8

GGA2-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA2, Length 5,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-201ENST00000309859 GH2P01242 217 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 NPR1P16066 1061 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 CCR10P46092 362 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 ARHGDIAP52565 204 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 SBK1Q52WX2 424 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 WDR45BQ5MNZ6 344 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 RWDD4Q6NW29 188 aaKnown RBP11.04□□□□□ -0.64
GGA2-201ENST00000309859 CCDC149Q6ZUS6 474 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 SFRP1Q8N474 314 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 DENND1AQ8TEH3 1009 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 AZIN2Q96A70 460 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 YME1L1Q96TA2 773 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 HSFX1Q9UBD0 423 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 USP18Q9UMW8 372 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 CHD2O14647 1828 aaKnown RBP11.04□□□□□ -0.64
GGA2-201ENST00000309859 LZTS3O60299 673 aaPredicted RBP11.04□□□□□ -0.64
GGA2-201ENST00000309859 CLASP2O75122 1294 aaKnown RBP11.04□□□□□ -0.64
GGA2-201ENST00000309859 CHRNGP07510 517 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 ALOX5P09917 674 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 ARP10275 920 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 ERCC2P18074 760 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 MTMR1Q13613 665 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 CSHL1Q14406 222 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 DLG2Q15700 870 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 RBBP7Q16576 425 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 TXNRD3NBQ6F5E7 133 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 KYAT3Q6YP21 454 aaKnown RBP11.04□□□□□ -0.64
GGA2-201ENST00000309859 DSG4Q86SJ6 1040 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 FAM71AQ8IYT1 594 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 UBR7Q8N806 425 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 OR6P1Q8NGX9 317 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 FBXO30Q8TB52 745 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 CDH19Q9H159 772 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 SARS2Q9NP81 518 aaKnown RBP11.04□□□□□ -0.64
GGA2-201ENST00000309859 IGSF9Q9P2J2 1179 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 TMEM98Q9Y2Y6 226 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 NCF1BA6NI72 391 aaPredicted RBP11.04□□□□□ -0.64
GGA2-201ENST00000309859 NCF1CA8MVU1 366 aaPredicted RBP11.04□□□□□ -0.64
GGA2-201ENST00000309859 F5H6K3 240 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 BTN3A3O00478 584 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 PRLP01236 227 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 CDH1P12830 882 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 NCF1P14598 390 aaPredicted RBP11.04□□□□□ -0.64
GGA2-201ENST00000309859 KLF1Q13351 362 aaPredicted RBP11.04□□□□□ -0.64
GGA2-201ENST00000309859 KLHL17Q6TDP4 642 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 C11orf74Q86VG3 221 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 IGDCC3Q8IVU1 814 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 MED10Q9BTT4 135 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 POLR3FQ9H1D9 316 aaPredicted RBP11.04□□□□□ -0.64
GGA2-201ENST00000309859 RSAD1Q9HA92 442 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 GABBR1Q9UBS5 961 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 GAKO14976 1311 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 DHRS12A0PJE2 317 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 SNTNA6NMZ2 147 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 EIF3FO00303 357 aaPredicted RBP11.04□□□□□ -0.64
GGA2-201ENST00000309859 ATE1O95260 518 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 RPL14P50914 215 aaKnown RBP11.04□□□□□ -0.64
GGA2-201ENST00000309859 DENND1BQ6P3S1 775 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 ENOSF1Q7L5Y1 443 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 SLC15A3Q8IY34 581 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 VGLL2Q8N8G2 317 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 MCFD2Q8NI22 146 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 ZHX1-C8orf76Q96EF9 292 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 SNX27Q96L92 541 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 GLT1D1Q96MS3 346 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 CCDC106Q9BWC9 280 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 TRIM8Q9BZR9 551 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.04□□□□□ -0.645e-8■■■■□ 19.3
GGA2-201ENST00000309859 TUFT1Q9NNX1 390 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 DDX43Q9NXZ2 648 aaKnown RBP11.04□□□□□ -0.64
GGA2-201ENST00000309859 DNAJB4Q9UDY4 337 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 SLIT1O75093 1534 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 CASZ1Q86V15 1759 aa11.04□□□□□ -0.64
GGA2-201ENST00000309859 TRIM24O15164 1050 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 CSH1P0DML2 217 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 CSH2P0DML3 217 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 MARSP56192 900 aaKnown RBP11.03□□□□□ -0.64
GGA2-201ENST00000309859 LRP8Q14114 963 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 RAP1GAP2Q684P5 730 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 EEPD1Q7L9B9 569 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 MARVELD2Q8N4S9 558 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 THUMPD3Q9BV44 507 aaKnown RBP11.03□□□□□ -0.64
GGA2-201ENST00000309859 WDR12Q9GZL7 423 aaKnown RBP11.03□□□□□ -0.64
GGA2-201ENST00000309859 DDX4Q9NQI0 724 aaKnown RBP11.03□□□□□ -0.64
GGA2-201ENST00000309859 RAD54BQ9Y620 910 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 hCG_1818297A0A087WSY0 165 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 RNASEH2AO75792 299 aaKnown RBP11.03□□□□□ -0.64
GGA2-201ENST00000309859 HMGCRP04035 888 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 FAM163BP0C2L3 166 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 PABPC1P11940 636 aaKnown RBP11.03□□□□□ -0.64
GGA2-201ENST00000309859 ADSSP30520 456 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 ECT2LQ008S8 904 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 SWSAP1Q6NVH7 229 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 C8orf59Q8N0T1 100 aaPredicted RBP11.03□□□□□ -0.64
GGA2-201ENST00000309859 CNOT6Q9ULM6 557 aaKnown RBP11.03□□□□□ -0.64
GGA2-201ENST00000309859 SORCS3Q9UPU3 1222 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 NUMBLQ9Y6R0 609 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 CLUHO75153 1309 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 RNF103O00237 685 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 EI24O14681 340 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms