RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 GCOM2Q9BZD3 368 aaPredicted RBP16.94■□□□□ 0.3
SSH3-201ENST00000308127 PCDHB12Q9Y5F1 795 aa16.94■□□□□ 0.3
SSH3-201ENST00000308127 CNTFP26441 200 aa16.93■□□□□ 0.3
SSH3-201ENST00000308127 NRF1Q16656 503 aa16.93■□□□□ 0.3
SSH3-201ENST00000308127 SLC5A9Q2M3M2 681 aa16.93■□□□□ 0.3
SSH3-201ENST00000308127 PQLC1Q8N2U9 271 aa16.93■□□□□ 0.3
SSH3-201ENST00000308127 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.93■□□□□ 0.3
SSH3-201ENST00000308127 URGCPQ8TCY9 931 aa16.93■□□□□ 0.3
SSH3-201ENST00000308127 KCTD4Q8WVF5 259 aa16.93■□□□□ 0.3
SSH3-201ENST00000308127 CELF6Q96J87 481 aaKnown RBP16.93■□□□□ 0.3
SSH3-201ENST00000308127 PRPF18Q99633 342 aaKnown RBP16.93■□□□□ 0.3
SSH3-201ENST00000308127 RBBP8Q99708 897 aa16.93■□□□□ 0.3
SSH3-201ENST00000308127 VRTNQ9H8Y1 702 aa16.93■□□□□ 0.3
SSH3-201ENST00000308127 ERAP1Q9NZ08 941 aa16.93■□□□□ 0.3
SSH3-201ENST00000308127 DNAJB4Q9UDY4 337 aa16.93■□□□□ 0.3
SSH3-201ENST00000308127 ZDHHC2Q9UIJ5 367 aa16.93■□□□□ 0.3
SSH3-201ENST00000308127 VANGL2Q9ULK5 521 aa16.93■□□□□ 0.3
SSH3-201ENST00000308127 POLR2AP24928 1970 aaKnown RBP16.93■□□□□ 0.3
SSH3-201ENST00000308127 ZBTB24O43167 697 aaPredicted RBP16.93■□□□□ 0.3
SSH3-201ENST00000308127 GAS2O43903 313 aaKnown RBP16.93■□□□□ 0.3
SSH3-201ENST00000308127 CSPG5O95196 566 aa16.93■□□□□ 0.3
SSH3-201ENST00000308127 SMIM18P0DKX4 95 aa16.93■□□□□ 0.3
SSH3-201ENST00000308127 CDKL1Q00532 357 aa16.93■□□□□ 0.3
SSH3-201ENST00000308127 CEACAM7Q14002 265 aa16.93■□□□□ 0.3
SSH3-201ENST00000308127 ARL13AQ5H913 290 aaPredicted RBP16.93■□□□□ 0.3
SSH3-201ENST00000308127 PIGZQ86VD9 579 aa16.93■□□□□ 0.3
SSH3-201ENST00000308127 METTL25Q8N6Q8 603 aa16.93■□□□□ 0.3
SSH3-201ENST00000308127 EZH1Q92800 747 aaPredicted RBP16.93■□□□□ 0.3
SSH3-201ENST00000308127 APBA2Q99767 749 aa16.93■□□□□ 0.3
SSH3-201ENST00000308127 NMRAL1Q9HBL8 299 aa16.93■□□□□ 0.3
SSH3-201ENST00000308127 SORCS3Q9UPU3 1222 aa16.93■□□□□ 0.3
SSH3-201ENST00000308127 SSC5DA1L4H1 1573 aa16.93■□□□□ 0.3
SSH3-201ENST00000308127 KLHL33A6NCF5 533 aa16.92■□□□□ 0.3
SSH3-201ENST00000308127 I6L893 689 aaPredicted RBP16.92■□□□□ 0.3
SSH3-201ENST00000308127 GRIA4P48058 902 aa16.92■□□□□ 0.3
SSH3-201ENST00000308127 NR2C2P49116 596 aa16.92■□□□□ 0.3
SSH3-201ENST00000308127 INHBCP55103 352 aa16.92■□□□□ 0.3
SSH3-201ENST00000308127 TTLL12Q14166 644 aaPredicted RBP16.92■□□□□ 0.3
SSH3-201ENST00000308127 GRM3Q14832 879 aa16.92■□□□□ 0.3
SSH3-201ENST00000308127 PCDH20Q8N6Y1 951 aaKnown RBP16.92■□□□□ 0.3
SSH3-201ENST00000308127 ACMSDQ8TDX5 336 aa16.92■□□□□ 0.3
SSH3-201ENST00000308127 FZD10Q9ULW2 581 aa16.92■□□□□ 0.3
SSH3-201ENST00000308127 HEMK1Q9Y5R4 338 aaPredicted RBP16.92■□□□□ 0.3
SSH3-201ENST00000308127 DNAJA2O60884 412 aa16.92■□□□□ 0.3
SSH3-201ENST00000308127 FBXO21O94952 628 aa16.92■□□□□ 0.3
SSH3-201ENST00000308127 CRTAMO95727 393 aa16.92■□□□□ 0.3
SSH3-201ENST00000308127 ZFXP17010 805 aaPredicted RBP16.92■□□□□ 0.3
SSH3-201ENST00000308127 NMBRP28336 390 aa16.92■□□□□ 0.3
SSH3-201ENST00000308127 GARSP41250 739 aaKnown RBP16.92■□□□□ 0.3
SSH3-201ENST00000308127 KCTD2Q14681 263 aa16.92■□□□□ 0.3
SSH3-201ENST00000308127 OTUD1Q5VV17 481 aaPredicted RBP16.92■□□□□ 0.3
SSH3-201ENST00000308127 SLC26A9Q7LBE3 791 aa16.92■□□□□ 0.3
SSH3-201ENST00000308127 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.92■□□□□ 0.3
SSH3-201ENST00000308127 APBB2Q92870 758 aa16.92■□□□□ 0.3
SSH3-201ENST00000308127 LRGUKQ96M69 825 aa16.92■□□□□ 0.3
SSH3-201ENST00000308127 PKP2Q99959 881 aa16.92■□□□□ 0.3
SSH3-201ENST00000308127 C11orf84Q9BUA3 381 aaPredicted RBP16.92■□□□□ 0.3
SSH3-201ENST00000308127 PIGVQ9NUD9 493 aa16.92■□□□□ 0.3
SSH3-201ENST00000308127 LZTS1Q9Y250 596 aa16.92■□□□□ 0.3
SSH3-201ENST00000308127 AP4B1Q9Y6B7 739 aa16.92■□□□□ 0.3
SSH3-201ENST00000308127 CDY2AQ9Y6F7 541 aa16.92■□□□□ 0.3
SSH3-201ENST00000308127 CDY1Q9Y6F8 540 aa16.92■□□□□ 0.3
SSH3-201ENST00000308127 SLC4A7Q9Y6M7 1214 aa16.92■□□□□ 0.3
SSH3-201ENST00000308127 SHROOM3Q8TF72 1996 aa16.91■□□□□ 0.3
SSH3-201ENST00000308127 NEMP2A6NFY4 417 aa16.91■□□□□ 0.3
SSH3-201ENST00000308127 ADM5C9JUS6 153 aa16.91■□□□□ 0.3
SSH3-201ENST00000308127 CNMDO75829 334 aa16.91■□□□□ 0.3
SSH3-201ENST00000308127 GNL1P36915 607 aaPredicted RBP16.91■□□□□ 0.3
SSH3-201ENST00000308127 PTPN9P43378 593 aa16.91■□□□□ 0.3
SSH3-201ENST00000308127 SNAPC2Q13487 334 aa16.91■□□□□ 0.3
SSH3-201ENST00000308127 CYTH1Q15438 398 aa16.91■□□□□ 0.3
SSH3-201ENST00000308127 NADK2Q4G0N4 442 aa16.91■□□□□ 0.3
SSH3-201ENST00000308127 ARHGAP22Q7Z5H3 698 aa16.91■□□□□ 0.3
SSH3-201ENST00000308127 NPWQ8N729 165 aa16.91■□□□□ 0.3
SSH3-201ENST00000308127 ZDHHC7Q9NXF8 308 aa16.91■□□□□ 0.3
SSH3-201ENST00000308127 EEF2KO00418 725 aaKnown RBP16.91■□□□□ 0.3
SSH3-201ENST00000308127 TRIM13O60858 407 aa16.91■□□□□ 0.3
SSH3-201ENST00000308127 HMGB2P26583 209 aaKnown RBP16.91■□□□□ 0.3
SSH3-201ENST00000308127 SERPINB8P50452 374 aa16.91■□□□□ 0.3
SSH3-201ENST00000308127 CDK18Q07002 472 aa16.91■□□□□ 0.3
SSH3-201ENST00000308127 BST2Q10589 180 aaKnown RBP16.91■□□□□ 0.3
SSH3-201ENST00000308127 OLFML2BQ68BL8 750 aa16.91■□□□□ 0.3
SSH3-201ENST00000308127 SLC41A1Q8IVJ1 513 aa16.91■□□□□ 0.3
SSH3-201ENST00000308127 KBTBD7Q8WVZ9 684 aa16.91■□□□□ 0.3
SSH3-201ENST00000308127 KCNK16Q96T55 309 aa16.91■□□□□ 0.3
SSH3-201ENST00000308127 ACE2Q9BYF1 805 aaPredicted RBP16.91■□□□□ 0.3
SSH3-201ENST00000308127 PCDHAC1Q9H158 963 aa16.91■□□□□ 0.3
SSH3-201ENST00000308127 RNF39Q9H2S5 420 aa16.91■□□□□ 0.3
SSH3-201ENST00000308127 IRAK4Q9NWZ3 460 aa16.91■□□□□ 0.3
SSH3-201ENST00000308127 ZCWPW2A0A1B0GU75 182 aa16.91■□□□□ 0.3
SSH3-201ENST00000308127 ANKRD33BA6NCL7 494 aa16.91■□□□□ 0.3
SSH3-201ENST00000308127 PTPN1P18031 435 aaKnown RBP16.91■□□□□ 0.3
SSH3-201ENST00000308127 RPL10P27635 214 aaKnown RBP16.91■□□□□ 0.3
SSH3-201ENST00000308127 SPRP35270 261 aaPredicted RBP16.91■□□□□ 0.3
SSH3-201ENST00000308127 ZBTB17Q13105 803 aa16.91■□□□□ 0.3
SSH3-201ENST00000308127 CTBP1Q13363 440 aa16.91■□□□□ 0.3
SSH3-201ENST00000308127 FSCBQ5H9T9 825 aa16.91■□□□□ 0.3
SSH3-201ENST00000308127 LAYNQ6UX15 382 aa16.91■□□□□ 0.3
SSH3-201ENST00000308127 ADGRG6Q86SQ4 1221 aa16.91■□□□□ 0.3
SSH3-201ENST00000308127 KCNMB4Q86W47 210 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms