RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 ADIGQ0VDE8 80 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 ANGEL2Q5VTE6 544 aaKnown RBP13.07□□□□□ -0.32
COL3A1-201ENST00000304636 TRIQKQ629K1 86 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 PQLC1Q8N2U9 271 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 GJD4Q96KN9 370 aaPredicted RBP13.07□□□□□ -0.32
COL3A1-201ENST00000304636 ADGRE3Q9BY15 652 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 KRCC1Q9NPI7 259 aaPredicted RBP13.07□□□□□ -0.32
COL3A1-201ENST00000304636 PNMA8BQ9ULN7 279 aaPredicted RBP13.07□□□□□ -0.32
COL3A1-201ENST00000304636 TMCO1Q9UM00 188 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 A0A087WZ62 844 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 ACKR2O00590 384 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 NOL4O94818 638 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 VTNP04004 478 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 CCR1P32246 355 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 BNIP2Q12982 314 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 VPS72Q15906 364 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 PIGWQ7Z7B1 504 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 ZNF554Q86TJ5 538 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 ADCY4Q8NFM4 1077 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 C19orf60Q96EN9 201 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 FDXACB1Q9BRP7 624 aaPredicted RBP13.06□□□□□ -0.32
COL3A1-201ENST00000304636 ACTR8Q9H981 624 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 POLR1BQ9H9Y6 1135 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 SYNPO2Q9UMS6 1093 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 PSMD13Q9UNM6 376 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 TSC22D2O75157 780 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 ALOX15P16050 662 aaPredicted RBP13.06□□□□□ -0.32
COL3A1-201ENST00000304636 JAK1P23458 1154 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 RINLQ6ZS11 566 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 DEFB106AQ8N104 65 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 TCF12Q99081 682 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 RERGLQ9H628 205 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 ENTPD7Q9NQZ7 604 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 RIC1Q4ADV7 1423 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 PDE9AO76083 593 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 ATP5F1P24539 256 aaPredicted RBP13.06□□□□□ -0.32
COL3A1-201ENST00000304636 RPS12P25398 132 aaKnown RBP13.06□□□□□ -0.32
COL3A1-201ENST00000304636 SERPINH1P50454 418 aaKnown RBP13.06□□□□□ -0.32
COL3A1-201ENST00000304636 TAS2R40P59535 323 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 PWP1Q13610 501 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 LIN52Q52LA3 116 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 ZBTB45Q96K62 511 aaPredicted RBP13.06□□□□□ -0.32
COL3A1-201ENST00000304636 UBXN6Q9BZV1 441 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 TMEM134Q9H6X4 195 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 LGALS13Q9UHV8 139 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 TGFB1I1O43294 461 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 CCNA2P20248 432 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 ST8SIA6P61647 398 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 SNAPC2Q13487 334 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 DPYSQ14117 519 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 PCID2Q5JVF3 399 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 AADATQ8N5Z0 425 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 METTL6Q8TCB7 284 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 S100ZQ8WXG8 99 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 DSEQ9UL01 958 aa13.06□□□□□ -0.32
COL3A1-201ENST00000304636 CALCAP01258 141 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 BPGMP07738 259 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 ITGA2BP08514 1039 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 LTA4HP09960 611 aaKnown RBP13.05□□□□□ -0.32
COL3A1-201ENST00000304636 SYTL1Q8IYJ3 562 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 TMEM132CQ8N3T6 1108 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 OMA1Q96E52 524 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 SALL4Q9UJQ4 1053 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 MEIS2O14770 477 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 RAD51BO15315 384 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 TGFB3P10600 412 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 PSMB4P28070 264 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 OR1G1P47890 313 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 TIMM50Q3ZCQ8 353 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 UNC5AQ6ZN44 842 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 HDDC2Q7Z4H3 204 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 TTC30BQ8N4P2 665 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 RCN3Q96D15 328 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 CDH19Q9H159 772 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 KLHL20Q9Y2M5 609 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 TNS2Q63HR2 1409 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 C5orf60A6NFR6 353 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 LYNP07948 512 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 PLK1P53350 603 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 TSNQ15631 228 aaKnown RBP13.05□□□□□ -0.32
COL3A1-201ENST00000304636 GPRC5AQ8NFJ5 357 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 OR52K1Q8NGK4 314 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 L3MBTL3Q96JM7 780 aaPredicted RBP13.05□□□□□ -0.32
COL3A1-201ENST00000304636 MARK4Q96L34 752 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 DENND2DQ9H6A0 471 aaPredicted RBP13.05□□□□□ -0.32
COL3A1-201ENST00000304636 PACSIN3Q9UKS6 424 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 LACTBL1A8MY62 500 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 CCNT2O60583 730 aaKnown RBP13.05□□□□□ -0.32
COL3A1-201ENST00000304636 FGRP09769 529 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 ALDH6A1Q02252 535 aaKnown RBP13.05□□□□□ -0.32
COL3A1-201ENST00000304636 PIWIL4Q7Z3Z4 852 aaKnown RBP13.05□□□□□ -0.32
COL3A1-201ENST00000304636 TMEM161BQ8NDZ6 487 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 ENKURQ8TC29 256 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 BORCS5Q969J3 196 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 MKL1Q969V6 931 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 SSU72Q9NP77 194 aaKnown RBP13.05□□□□□ -0.32
COL3A1-201ENST00000304636 UBAP1Q9NZ09 502 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 USP12O75317 370 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 B3GAT3O94766 335 aa13.05□□□□□ -0.32
COL3A1-201ENST00000304636 SERPINF2P08697 491 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms