RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 C4orf22Q6V702 233 aa12.37□□□□□ -0.43
PDGFD-201ENST00000302251 ZNF555Q8NEP9 628 aa12.37□□□□□ -0.43
PDGFD-201ENST00000302251 RDM1Q8NG50 284 aa12.37□□□□□ -0.43
PDGFD-201ENST00000302251 EDEM1Q92611 657 aa12.37□□□□□ -0.43
PDGFD-201ENST00000302251 LRRC39Q96DD0 335 aa12.37□□□□□ -0.43
PDGFD-201ENST00000302251 DSEQ9UL01 958 aa12.37□□□□□ -0.43
PDGFD-201ENST00000302251 BTAF1O14981 1849 aa12.37□□□□□ -0.43
PDGFD-201ENST00000302251 ERI2A8K979 691 aaKnown RBP12.37□□□□□ -0.43
PDGFD-201ENST00000302251 DLGAP3O95886 979 aa12.37□□□□□ -0.43
PDGFD-201ENST00000302251 PCNAP12004 261 aa12.37□□□□□ -0.43
PDGFD-201ENST00000302251 KCNK10P57789 538 aa12.37□□□□□ -0.43
PDGFD-201ENST00000302251 PTP4A2Q12974 167 aa12.37□□□□□ -0.43
PDGFD-201ENST00000302251 CBX3Q13185 183 aa12.37□□□□□ -0.43
PDGFD-201ENST00000302251 NOMO1Q15155 1222 aa12.37□□□□□ -0.43
PDGFD-201ENST00000302251 NAPEPLDQ6IQ20 393 aa12.37□□□□□ -0.43
PDGFD-201ENST00000302251 DHRSXQ8N5I4 330 aa12.37□□□□□ -0.43
PDGFD-201ENST00000302251 DRAXINQ8NBI3 349 aaPredicted RBP12.37□□□□□ -0.43
PDGFD-201ENST00000302251 ZNF280CQ8ND82 737 aa12.37□□□□□ -0.43
PDGFD-201ENST00000302251 SHCBP1Q8NEM2 672 aa12.37□□□□□ -0.43
PDGFD-201ENST00000302251 DNAJB14Q8TBM8 379 aa12.37□□□□□ -0.43
PDGFD-201ENST00000302251 DDX1Q92499 740 aaKnown RBP12.37□□□□□ -0.43
PDGFD-201ENST00000302251 NOD1Q9Y239 953 aa12.37□□□□□ -0.43
PDGFD-201ENST00000302251 PCDHA11Q9Y5I1 949 aa12.37□□□□□ -0.43
PDGFD-201ENST00000302251 C16orf96A6NNT2 1141 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 BIRC5O15392 142 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 PLIN3O60664 434 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 KRT75O95678 551 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 XRCC1P18887 633 aaPredicted RBP12.36□□□□□ -0.43
PDGFD-201ENST00000302251 SLC5A3P53794 718 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 GTF2H3Q13889 308 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 DGCR6Q14129 220 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 GRTP1Q5TC63 336 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 EEF1DP3Q658K8 133 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 ZNF554Q86TJ5 538 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 SIAH1Q8IUQ4 282 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 IFT43Q96FT9 208 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 TMA7Q9Y2S6 64 aaKnown RBP12.36□□□□□ -0.43
PDGFD-201ENST00000302251 COQ4Q9Y3A0 265 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 MYH11P35749 1972 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 SUPT3HB4E1H0 165 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 METTL18O95568 372 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 MAGP20916 626 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 ARHGDIAP52565 204 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 CDH13P55290 713 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 TGFB2P61812 414 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 ARL13AQ5H913 290 aaPredicted RBP12.36□□□□□ -0.43
PDGFD-201ENST00000302251 SLC41A1Q8IVJ1 513 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 DEFB106AQ8N104 65 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 ATPAF2Q8N5M1 289 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 APPL2Q8NEU8 664 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 ZFAND2BQ8WV99 257 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 LRTOMTQ8WZ04 291 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 ZBTB18Q99592 522 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 PLGRKTQ9HBL7 147 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 CPSF3Q9UKF6 684 aaKnown RBP12.36□□□□□ -0.43
PDGFD-201ENST00000302251 ITGA11Q9UKX5 1188 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 KDM4FA0A1W2PPD8 638 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 KCNU1A8MYU2 1149 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 TBC1D4O60343 1298 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 IL18RAPO95256 599 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 APOA4P06727 396 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 CHRNGP07510 517 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 SLC7A2P52569 658 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 ATXN1P54253 815 aaKnown RBP12.36□□□□□ -0.43
PDGFD-201ENST00000302251 CCNA1P78396 465 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 NR1D2Q14995 579 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 ZNF470Q6ECI4 717 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 C15orf52Q6ZUT6 534 aaKnown RBP12.36□□□□□ -0.43
PDGFD-201ENST00000302251 VSIG10LQ86VR7 867 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 SKA1Q96BD8 255 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 TNIP3Q96KP6 325 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 NDEL1Q9GZM8 345 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 PORCNQ9H237 461 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 PIN4Q9Y237 131 aaKnown RBP12.36□□□□□ -0.43
PDGFD-201ENST00000302251 LTBP4Q8N2S1 1624 aa12.36□□□□□ -0.43
PDGFD-201ENST00000302251 TK2O00142 265 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 ZBTB11O95625 1053 aaPredicted RBP12.35□□□□□ -0.43
PDGFD-201ENST00000302251 KRT8P05787 483 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 MYL4P12829 197 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 TFEBP19484 476 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 GSSP48637 474 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 THOP1P52888 689 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 KLF1Q13351 362 aaPredicted RBP12.35□□□□□ -0.43
PDGFD-201ENST00000302251 STILQ15468 1287 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 SLC9B1Q4ZJI4 515 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 C1orf220Q5T0J3 134 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 TATDN1Q6P1N9 297 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 FRA10AC1Q70Z53 315 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 FASTKD5Q7L8L6 764 aaKnown RBP12.35□□□□□ -0.43
PDGFD-201ENST00000302251 OFCC1Q8IZS5 231 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 NDRG1Q92597 394 aaKnown RBP12.35□□□□□ -0.43
PDGFD-201ENST00000302251 RMDN1Q96DB5 314 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 CPNE1Q99829 537 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 CDH19Q9H159 772 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 POMKQ9H5K3 350 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 ADAMTS6Q9UKP5 1117 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 BARX2Q9UMQ3 279 aaPredicted RBP12.35□□□□□ -0.43
PDGFD-201ENST00000302251 M0QZ92 97 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 SPTLC1O15269 473 aa12.35□□□□□ -0.43
PDGFD-201ENST00000302251 VNN1O95497 513 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms