RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 GPX6P59796 221 aa16.07■□□□□ 0.16
HERPUD1-201ENST00000300302 MAGOHP61326 146 aaKnown RBP16.07■□□□□ 0.16
HERPUD1-201ENST00000300302 PARP15Q460N3 678 aa16.07■□□□□ 0.16
HERPUD1-201ENST00000300302 LRRC8BQ6P9F7 803 aa16.07■□□□□ 0.16
HERPUD1-201ENST00000300302 ARHGAP36Q6ZRI8 547 aa16.07■□□□□ 0.16
HERPUD1-201ENST00000300302 RTL10Q7L3V2 364 aa16.07■□□□□ 0.16
HERPUD1-201ENST00000300302 TNS4Q8IZW8 715 aa16.07■□□□□ 0.16
HERPUD1-201ENST00000300302 MRPS31Q92665 395 aaKnown RBP16.07■□□□□ 0.16
HERPUD1-201ENST00000300302 FATE1Q969F0 183 aa16.07■□□□□ 0.16
HERPUD1-201ENST00000300302 TLCD1Q96CP7 247 aa16.07■□□□□ 0.16
HERPUD1-201ENST00000300302 GCNAQ96QF7 691 aa16.07■□□□□ 0.16
HERPUD1-201ENST00000300302 WDR83Q9BRX9 315 aaKnown RBP16.07■□□□□ 0.16
HERPUD1-201ENST00000300302 C17orf80Q9BSJ5 609 aa16.07■□□□□ 0.16
HERPUD1-201ENST00000300302 IL21Q9HBE4 155 aa16.07■□□□□ 0.16
HERPUD1-201ENST00000300302 GKN1Q9NS71 199 aa16.07■□□□□ 0.16
HERPUD1-201ENST00000300302 IPO11Q9UI26 975 aaKnown RBP16.07■□□□□ 0.16
HERPUD1-201ENST00000300302 SHROOM3Q8TF72 1996 aa16.06■□□□□ 0.16
HERPUD1-201ENST00000300302 HIDE1A8MVS5 230 aa16.06■□□□□ 0.16
HERPUD1-201ENST00000300302 RASA4BC9J798 803 aa16.06■□□□□ 0.16
HERPUD1-201ENST00000300302 PSMD3O43242 534 aa16.06■□□□□ 0.16
HERPUD1-201ENST00000300302 RASA4O43374 803 aa16.06■□□□□ 0.16
HERPUD1-201ENST00000300302 RAMP2O60895 175 aa16.06■□□□□ 0.16
HERPUD1-201ENST00000300302 AP2A1O95782 977 aa16.06■□□□□ 0.16
HERPUD1-201ENST00000300302 CPP00450 1065 aa16.06■□□□□ 0.16
HERPUD1-201ENST00000300302 MYOGP15173 224 aa16.06■□□□□ 0.16
HERPUD1-201ENST00000300302 GABRR2P28476 465 aa16.06■□□□□ 0.16
HERPUD1-201ENST00000300302 SSTR1P30872 391 aa16.06■□□□□ 0.16
HERPUD1-201ENST00000300302 YBEYP58557 167 aaPredicted RBP16.06■□□□□ 0.16
HERPUD1-201ENST00000300302 SHHQ15465 462 aa16.06■□□□□ 0.16
HERPUD1-201ENST00000300302 TERF2Q15554 542 aa16.06■□□□□ 0.16
HERPUD1-201ENST00000300302 KLHL38Q2WGJ6 581 aa16.06■□□□□ 0.16
HERPUD1-201ENST00000300302 FAM133BQ5BKY9 247 aaKnown RBP16.06■□□□□ 0.16
HERPUD1-201ENST00000300302 PPM1LQ5SGD2 360 aa16.06■□□□□ 0.16
HERPUD1-201ENST00000300302 ADGRF1Q5T601 910 aa16.06■□□□□ 0.16
HERPUD1-201ENST00000300302 EMC10Q5UCC4 262 aa16.06■□□□□ 0.16
HERPUD1-201ENST00000300302 FAM109BQ6ICB4 259 aaPredicted RBP16.06■□□□□ 0.16
HERPUD1-201ENST00000300302 KDM7AQ6ZMT4 941 aa16.06■□□□□ 0.16
HERPUD1-201ENST00000300302 ZNF534Q76KX8 674 aa16.06■□□□□ 0.16
HERPUD1-201ENST00000300302 ZSCAN18Q8TBC5 510 aaPredicted RBP16.06■□□□□ 0.16
HERPUD1-201ENST00000300302 IL12RB2Q99665 862 aa16.06■□□□□ 0.16
HERPUD1-201ENST00000300302 NOL6Q9H6R4 1146 aaKnown RBP16.06■□□□□ 0.16
HERPUD1-201ENST00000300302 FETUBQ9UGM5 382 aa16.06■□□□□ 0.16
HERPUD1-201ENST00000300302 ZC3H7BQ9UGR2 993 aaKnown RBP16.06■□□□□ 0.16
HERPUD1-201ENST00000300302 LATS1O95835 1130 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 C1RP00736 705 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 GSTA2P09210 222 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 IRF1P10914 325 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 HDCP19113 662 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 NFKB1P19838 968 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 CDC25CP30307 473 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 SLC6A4P31645 630 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 HPDP32754 393 aaPredicted RBP16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 CD68P34810 354 aaPredicted RBP16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 RENBPP51606 427 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 POLD3Q15054 466 aaPredicted RBP16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 TAOK1Q7L7X3 1001 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 ZNF354CQ86Y25 554 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 NSMCE1Q8WV22 266 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 ZNF212Q9UDV6 495 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 LGALS13Q9UHV8 139 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 SLC24A2Q9UI40 661 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 AAR2Q9Y312 384 aaKnown RBP16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 ANAPC1Q9H1A4 1944 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 SDR42E2A6NKP2 422 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 A6NNZ2 444 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 SUN1O94901 812 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 ARHGEF15O94989 841 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 CSPG5O95196 566 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 OLFM2O95897 454 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 KLKB1P03952 638 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 DNAJB1P25685 340 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 STX2P32856 288 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 MMP13P45452 471 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 CLCN4P51793 760 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 CDH4P55283 916 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 GEMIN4P57678 1058 aaKnown RBP16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 SMAD3P84022 425 aaKnown RBP16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 TUBB8Q3ZCM7 444 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 TNFAIP8L3Q5GJ75 292 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 TXNDC8Q6A555 127 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 RFWD3Q6PCD5 774 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 SPRED2Q7Z698 418 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 CIR1Q86X95 450 aaPredicted RBP16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 TDRPQ86YL5 185 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 IGDCC3Q8IVU1 814 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 FBF1Q8TES7 1133 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 USP33Q8TEY7 942 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 HMCESQ96FZ2 354 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 EBNA1BP2Q99848 306 aaKnown RBP16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 ACSS3Q9H6R3 686 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 SP110Q9HB58 689 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 ASAH2Q9NR71 780 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 SMPD4Q9NXE4 827 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 RABGEF1Q9UJ41 708 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 AGO1Q9UL18 857 aaKnown RBP16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 MAD1L1Q9Y6D9 718 aa16.05■□□□□ 0.16
HERPUD1-201ENST00000300302 POC1B-GALNT4F8VUJ3 575 aa16.04■□□□□ 0.16
HERPUD1-201ENST00000300302 AP3B1O00203 1094 aa16.04■□□□□ 0.16
HERPUD1-201ENST00000300302 CLDN11O75508 207 aa16.04■□□□□ 0.16
HERPUD1-201ENST00000300302 ANXA9O76027 345 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms