RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 SPHK2Q9NRA0 654 aa21.74■■□□□ 1.07
SMCO4-201ENST00000298966 STARD13Q9Y3M8 1113 aa21.74■■□□□ 1.07
SMCO4-201ENST00000298966 URB1O60287 2271 aaKnown RBP21.74■■□□□ 1.07
SMCO4-201ENST00000298966 GOLGA8SH3BPF8 625 aa21.73■■□□□ 1.07
SMCO4-201ENST00000298966 CLDN5O00501 218 aa21.73■■□□□ 1.07
SMCO4-201ENST00000298966 PSTPIP1O43586 416 aa21.73■■□□□ 1.07
SMCO4-201ENST00000298966 CTNNA1P35221 906 aaKnown RBP21.73■■□□□ 1.07
SMCO4-201ENST00000298966 RGS7P49802 495 aa21.73■■□□□ 1.07
SMCO4-201ENST00000298966 RAB41Q5JT25 222 aa21.73■■□□□ 1.07
SMCO4-201ENST00000298966 LRRC38Q5VT99 294 aa21.73■■□□□ 1.07
SMCO4-201ENST00000298966 EGFLAMQ63HQ2 1017 aa21.73■■□□□ 1.07
SMCO4-201ENST00000298966 GRAMD4Q6IC98 578 aa21.73■■□□□ 1.07
SMCO4-201ENST00000298966 ZNF572Q7Z3I7 529 aaPredicted RBP21.73■■□□□ 1.07
SMCO4-201ENST00000298966 NUP93Q8N1F7 819 aa21.73■■□□□ 1.07
SMCO4-201ENST00000298966 SIX6OS1Q8N1H7 587 aa21.73■■□□□ 1.07
SMCO4-201ENST00000298966 OVCA2Q8WZ82 227 aa21.73■■□□□ 1.07
SMCO4-201ENST00000298966 IRGQQ8WZA9 623 aa21.73■■□□□ 1.07
SMCO4-201ENST00000298966 FBXO32Q969P5 355 aa21.73■■□□□ 1.07
SMCO4-201ENST00000298966 SMOQ99835 787 aa21.73■■□□□ 1.07
SMCO4-201ENST00000298966 METTL5Q9NRN9 209 aaKnown RBP21.73■■□□□ 1.07
SMCO4-201ENST00000298966 TMEM51Q9NW97 253 aa21.73■■□□□ 1.07
SMCO4-201ENST00000298966 RAXQ9Y2V3 346 aa21.73■■□□□ 1.07
SMCO4-201ENST00000298966 HELZ2Q9BYK8 2649 aaKnown RBP21.73■■□□□ 1.07
SMCO4-201ENST00000298966 EFCAB8A8MWE9 144 aa21.72■■□□□ 1.07
SMCO4-201ENST00000298966 PAPSS1O43252 624 aaPredicted RBP21.72■■□□□ 1.07
SMCO4-201ENST00000298966 COCHO43405 550 aa21.72■■□□□ 1.07
SMCO4-201ENST00000298966 RTN3O95197 1032 aaPredicted RBP21.72■■□□□ 1.07
SMCO4-201ENST00000298966 PAFAH1B1P43034 410 aa21.72■■□□□ 1.07
SMCO4-201ENST00000298966 MAP3K7CLP57077 242 aa21.72■■□□□ 1.07
SMCO4-201ENST00000298966 GRIK2Q13002 908 aa21.72■■□□□ 1.07
SMCO4-201ENST00000298966 HECTD3Q5T447 861 aa21.72■■□□□ 1.07
SMCO4-201ENST00000298966 GLRX5Q86SX6 157 aa21.72■■□□□ 1.07
SMCO4-201ENST00000298966 TMEM25Q86YD3 366 aa21.72■■□□□ 1.07
SMCO4-201ENST00000298966 MIB1Q86YT6 1006 aa21.72■■□□□ 1.07
SMCO4-201ENST00000298966 BBS7Q8IWZ6 715 aa21.72■■□□□ 1.07
SMCO4-201ENST00000298966 ZFRQ96KR1 1074 aaKnown RBP21.72■■□□□ 1.07
SMCO4-201ENST00000298966 SCUBE2Q9NQ36 999 aa21.72■■□□□ 1.07
SMCO4-201ENST00000298966 TMEM59LQ9UK28 342 aa21.72■■□□□ 1.07
SMCO4-201ENST00000298966 HCN2Q9UL51 889 aa21.72■■□□□ 1.07
SMCO4-201ENST00000298966 PCDHA3Q9Y5H8 950 aa21.72■■□□□ 1.07
SMCO4-201ENST00000298966 ASXL3Q9C0F0 2248 aa21.72■■□□□ 1.07
SMCO4-201ENST00000298966 GOLGA4Q13439 2230 aaKnown RBP21.71■■□□□ 1.07
SMCO4-201ENST00000298966 TMEM110-MUSTN1A8MSY1 372 aa21.71■■□□□ 1.07
SMCO4-201ENST00000298966 TULP2O00295 520 aa21.71■■□□□ 1.07
SMCO4-201ENST00000298966 HSF2BPO75031 334 aa21.71■■□□□ 1.07
SMCO4-201ENST00000298966 GPD1P21695 349 aa21.71■■□□□ 1.07
SMCO4-201ENST00000298966 RFC1P35251 1148 aaPredicted RBP21.71■■□□□ 1.07
SMCO4-201ENST00000298966 ZNF143P52747 638 aaPredicted RBP21.71■■□□□ 1.07
SMCO4-201ENST00000298966 CACNA2D1P54289 1103 aa21.71■■□□□ 1.07
SMCO4-201ENST00000298966 RPL7AP62424 266 aaKnown RBP21.71■■□□□ 1.07
SMCO4-201ENST00000298966 SLCO6A1Q86UG4 719 aa21.71■■□□□ 1.07
SMCO4-201ENST00000298966 CREG2Q8IUH2 290 aa21.71■■□□□ 1.07
SMCO4-201ENST00000298966 RHOT1Q8IXI2 618 aa21.71■■□□□ 1.07
SMCO4-201ENST00000298966 SETD7Q8WTS6 366 aaKnown RBP21.71■■□□□ 1.07
SMCO4-201ENST00000298966 ERLEC1Q96DZ1 483 aa21.71■■□□□ 1.07
SMCO4-201ENST00000298966 ACOX2Q99424 681 aa21.71■■□□□ 1.07
SMCO4-201ENST00000298966 CNPY3Q9BT09 278 aa21.71■■□□□ 1.07
SMCO4-201ENST00000298966 GOLPH3Q9H4A6 298 aa21.71■■□□□ 1.07
SMCO4-201ENST00000298966 DNAJC17Q9NVM6 304 aaKnown RBP21.71■■□□□ 1.07
SMCO4-201ENST00000298966 COMMD8Q9NX08 183 aa21.71■■□□□ 1.07
SMCO4-201ENST00000298966 TJP2Q9UDY2 1190 aa21.71■■□□□ 1.07
SMCO4-201ENST00000298966 CHORDC1Q9UHD1 332 aaPredicted RBP21.71■■□□□ 1.07
SMCO4-201ENST00000298966 FAM170AA1A519 330 aa21.7■■□□□ 1.06
SMCO4-201ENST00000298966 C2CD4BA6NLJ0 364 aa21.7■■□□□ 1.06
SMCO4-201ENST00000298966 KCNK3O14649 394 aa21.7■■□□□ 1.06
SMCO4-201ENST00000298966 TRIM24O15164 1050 aa21.7■■□□□ 1.06
SMCO4-201ENST00000298966 SRGAP2O75044 1071 aa21.7■■□□□ 1.06
SMCO4-201ENST00000298966 RNF8O76064 485 aa21.7■■□□□ 1.06
SMCO4-201ENST00000298966 PSMA2P25787 234 aa21.7■■□□□ 1.06
SMCO4-201ENST00000298966 PTPN9P43378 593 aa21.7■■□□□ 1.06
SMCO4-201ENST00000298966 TKTL1P51854 596 aa21.7■■□□□ 1.06
SMCO4-201ENST00000298966 ADIGQ0VDE8 80 aa21.7■■□□□ 1.06
SMCO4-201ENST00000298966 HADHQ16836 314 aaKnown RBP21.7■■□□□ 1.06
SMCO4-201ENST00000298966 CCDC181Q5TID7 509 aa21.7■■□□□ 1.06
SMCO4-201ENST00000298966 KIAA1324Q6UXG2 1013 aaKnown RBP21.7■■□□□ 1.06
SMCO4-201ENST00000298966 BEND5Q7L4P6 421 aa21.7■■□□□ 1.06
SMCO4-201ENST00000298966 POLNQ7Z5Q5 900 aa21.7■■□□□ 1.06
SMCO4-201ENST00000298966 PHLDB2Q86SQ0 1253 aa21.7■■□□□ 1.06
SMCO4-201ENST00000298966 ZMIZ2Q8NF64 920 aa21.7■■□□□ 1.06
SMCO4-201ENST00000298966 LRIG1Q96JA1 1093 aa21.7■■□□□ 1.06
SMCO4-201ENST00000298966 XPO6Q96QU8 1125 aaKnown RBP21.7■■□□□ 1.06
SMCO4-201ENST00000298966 NAP1L3Q99457 506 aaPredicted RBP21.7■■□□□ 1.06
SMCO4-201ENST00000298966 GABRG3Q99928 467 aa21.7■■□□□ 1.06
SMCO4-201ENST00000298966 CD248Q9HCU0 757 aa21.7■■□□□ 1.06
SMCO4-201ENST00000298966 TMEM30AQ9NV96 361 aa21.7■■□□□ 1.06
SMCO4-201ENST00000298966 RRN3Q9NYV6 651 aa21.7■■□□□ 1.06
SMCO4-201ENST00000298966 KIAA1522Q9P206 1035 aaPredicted RBP21.7■■□□□ 1.06
SMCO4-201ENST00000298966 PCOLCE2Q9UKZ9 415 aa21.7■■□□□ 1.06
SMCO4-201ENST00000298966 TTC7AQ9ULT0 858 aaPredicted RBP21.7■■□□□ 1.06
SMCO4-201ENST00000298966 A0A1B0GTW7 788 aa21.69■■□□□ 1.06
SMCO4-201ENST00000298966 CTAGE15A4D2H0 777 aa21.69■■□□□ 1.06
SMCO4-201ENST00000298966 MEI4A8MW99 385 aa21.69■■□□□ 1.06
SMCO4-201ENST00000298966 HHLA1C9JL84 531 aa21.69■■□□□ 1.06
SMCO4-201ENST00000298966 DDX3YO15523 660 aaKnown RBP21.69■■□□□ 1.06
SMCO4-201ENST00000298966 CBFA2T3O75081 653 aa21.69■■□□□ 1.06
SMCO4-201ENST00000298966 CTAGE8P0CG41 777 aa21.69■■□□□ 1.06
SMCO4-201ENST00000298966 IRF1P10914 325 aa21.69■■□□□ 1.06
SMCO4-201ENST00000298966 LCP1P13796 627 aa21.69■■□□□ 1.06
SMCO4-201ENST00000298966 MAOBP27338 520 aa21.69■■□□□ 1.06
SMCO4-201ENST00000298966 SDC4P31431 198 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms